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HG10012401 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012401
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:20811018..20811446
RNA-Seq ExpressionHG10012401
SyntenyHG10012401
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067676.1 hypothetical protein E6C27_scaffold70G00450 [Cucumis melo var. makuwa]4.7e-4671.83Show/hide
Query:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG
        MQI + ++QRQSIT QL NV NP+PN  LNA++HRLPLKPFAT   IG+ GA+P LNI H E++IAA TELRHLGNG  +GV+RVTQFFQTVVKSR ISG
Subjt:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG

Query:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD
        GEA+GV KLEDL GGGLDGGE +GE GGGQKA  CLDGI +D
Subjt:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD

KAA0067677.1 hypothetical protein E6C27_scaffold70G00470 [Cucumis melo var. makuwa]5.4e-5076.06Show/hide
Query:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG
        MQISDP++QRQSITSQL NV+NP+PN  LNA++HRLPLKPFAT   IG+ GA+P LNI H EI+IAA TELRHLGNG  +GV+RVTQFFQTVVKSRDISG
Subjt:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG

Query:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD
        GEA+GV KLEDL GGGLDGGE +GE GGGQKA  CLDGI +D
Subjt:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD

PON87359.1 hypothetical protein TorRG33x02_168510 [Trema orientale]5.8e-0433.8Show/hide
Query:  VDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIA------ATTELRHLGNGGGKGVNRVTQFFQTVVK---SRD
        VD+R+ I S   ++  P+ + GL+ AV  + L+   T  LIGE GA P L++AH E +        A  E+ HL       V+ V +  + VV+      
Subjt:  VDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIA------ATTELRHLGNGGGKGVNRVTQFFQTVVK---SRD

Query:  ISGGEAVGV-GKLEDLGGGGLDGGERDGEGGGGQKARACLDG
        + GG  VG+ G + D+GG  L  GE  G+GG G+ +R    G
Subjt:  ISGGEAVGV-GKLEDLGGGGLDGGERDGEGGGGQKARACLDG

TrEMBL top hitse value%identityAlignment
A0A0A0L5L7 Uncharacterized protein3.0e-4671.83Show/hide
Query:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG
        MQI++ ++QRQS+TSQL NV+N SPN  LNA+VHRLPLKPFAT   I + GA+P LNI H E++I A TELRHLGNG  +GV+RVTQFFQ VVKSRDISG
Subjt:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG

Query:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD
        GEA+GV KLEDL GGGLDGGE +GEGGGGQKA  CLDGI +D
Subjt:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD

A0A0A0L9G9 Uncharacterized protein7.9e-4773.24Show/hide
Query:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG
        MQIS P++QRQSITSQL NV+N SPN  LNA+VHRLPLKPFAT   I + GA+P LNI H E++I  +TELRHLGNG  +GV+RVTQFFQ VVKSRDISG
Subjt:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG

Query:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD
        GEA+GV KLEDL GGGLDGGE +GEGGGGQKA  CLDGI +D
Subjt:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD

A0A2P5EPC4 Uncharacterized protein2.8e-0433.8Show/hide
Query:  VDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIA------ATTELRHLGNGGGKGVNRVTQFFQTVVK---SRD
        VD+R+ I S   ++  P+ + GL+ AV  + L+   T  LIGE GA P L++AH E +        A  E+ HL       V+ V +  + VV+      
Subjt:  VDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIA------ATTELRHLGNGGGKGVNRVTQFFQTVVK---SRD

Query:  ISGGEAVGV-GKLEDLGGGGLDGGERDGEGGGGQKARACLDG
        + GG  VG+ G + D+GG  L  GE  G+GG G+ +R    G
Subjt:  ISGGEAVGV-GKLEDLGGGGLDGGERDGEGGGGQKARACLDG

A0A5A7VKH2 Uncharacterized protein2.6e-5076.06Show/hide
Query:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG
        MQISDP++QRQSITSQL NV+NP+PN  LNA++HRLPLKPFAT   IG+ GA+P LNI H EI+IAA TELRHLGNG  +GV+RVTQFFQTVVKSRDISG
Subjt:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG

Query:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD
        GEA+GV KLEDL GGGLDGGE +GE GGGQKA  CLDGI +D
Subjt:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD

A0A5A7VMC4 Uncharacterized protein2.3e-4671.83Show/hide
Query:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG
        MQI + ++QRQSIT QL NV NP+PN  LNA++HRLPLKPFAT   IG+ GA+P LNI H E++IAA TELRHLGNG  +GV+RVTQFFQTVVKSR ISG
Subjt:  MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISG

Query:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD
        GEA+GV KLEDL GGGLDGGE +GE GGGQKA  CLDGI +D
Subjt:  GEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATCAGCGATCCGGTTGATCAAAGACAGAGCATTACTAGTCAACTGCCCAATGTTAACAATCCTAGTCCTAACTGCGGCCTTAACGCCGCCGTTCACCGCCTTCC
CCTGAAACCCTTCGCTACAAGTAGTCTCATCGGTGAGGGCGGCGCTGACCCAAGTTTGAACATTGCTCATAACGAGATCAAAATCGCGGCCACGACGGAGCTTCGGCATC
TCGGAAATGGAGGCGGCAAGGGAGTCAACAGAGTCACTCAGTTCTTCCAAACAGTCGTTAAGAGCAGAGACATCTCTGGAGGGGAGGCCGTGGGCGTGGGAAAGCTTGAG
GATTTGGGTGGCGGCGGACTTGACGGAGGAGAGAGAGACGGAGAGGGCGGTGGTGGCCAAAAGGCGAGGGCTTGTTTGGATGGCATTAGCGTGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATCAGCGATCCGGTTGATCAAAGACAGAGCATTACTAGTCAACTGCCCAATGTTAACAATCCTAGTCCTAACTGCGGCCTTAACGCCGCCGTTCACCGCCTTCC
CCTGAAACCCTTCGCTACAAGTAGTCTCATCGGTGAGGGCGGCGCTGACCCAAGTTTGAACATTGCTCATAACGAGATCAAAATCGCGGCCACGACGGAGCTTCGGCATC
TCGGAAATGGAGGCGGCAAGGGAGTCAACAGAGTCACTCAGTTCTTCCAAACAGTCGTTAAGAGCAGAGACATCTCTGGAGGGGAGGCCGTGGGCGTGGGAAAGCTTGAG
GATTTGGGTGGCGGCGGACTTGACGGAGGAGAGAGAGACGGAGAGGGCGGTGGTGGCCAAAAGGCGAGGGCTTGTTTGGATGGCATTAGCGTGGACTGA
Protein sequenceShow/hide protein sequence
MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISGGEAVGVGKLE
DLGGGGLDGGERDGEGGGGQKARACLDGISVD