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HG10012408 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012408
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionperoxisomal membrane protein 11B
Genome locationChr01:20890244..20890558
RNA-Seq ExpressionHG10012408
SyntenyHG10012408
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016559 - peroxisome fission (biological process)
GO:0044375 - regulation of peroxisome size (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005779 - integral component of peroxisomal membrane (cellular component)
GO:0017119 - Golgi transport complex (cellular component)
GO:0042802 - identical protein binding (molecular function)
InterPro domainsIPR008733 - Peroxisomal biogenesis factor 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067667.1 conserved oligomeric Golgi complex subunit 7 [Cucumis melo var. makuwa]4.1e-4793.27Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
        MSFISAFGESFGYIFFIVAD+IM+KQGIEAERKLRSS+EDSK+ES+NKIK DRIMRLMAVAANVADL+IGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR

Query:  NWPS
        NWPS
Subjt:  NWPS

XP_008439086.1 PREDICTED: peroxisomal membrane protein 11B [Cucumis melo]4.1e-4793.27Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
        MSFISAFGESFGYIFFIVAD+IM+KQGIEAERKLRSS+EDSK+ES+NKIK DRIMRLMAVAANVADL+IGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR

Query:  NWPS
        NWPS
Subjt:  NWPS

XP_022942704.1 peroxisomal membrane protein 11B [Cucurbita moschata]5.0e-4591.43Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSE-EDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWY
        MSFISAFGESFGYIFFIVADLIM+KQGIEAERKL+SSE EDSK+E+V KI+GDR+MRLMAVAANVADLLI LAEIEPNPFCNHTITLGISGLVSAWAGWY
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSE-EDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWY

Query:  RNWPS
        RNWPS
Subjt:  RNWPS

XP_023552328.1 peroxisomal membrane protein 11B [Cucurbita pepo subsp. pepo]5.0e-4591.43Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSE-EDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWY
        MSFISAFGESFGYIFFIVADLIM+KQGIEAERKL+SSE EDSK+E+V KI+GDR+MRLMAVAANVADLLI LAEIEPNPFCNHTITLGISGLVSAWAGWY
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSE-EDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWY

Query:  RNWPS
        RNWPS
Subjt:  RNWPS

XP_038900297.1 peroxisomal membrane protein 11B isoform X1 [Benincasa hispida]2.4e-4794.23Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
        MSFISAFGESFGYIFFIVAD+IM+KQGIEAERKLRSSEEDSK+E VNKI GDRIMRLMAVAANVADL+IGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR

Query:  NWPS
        NWPS
Subjt:  NWPS

TrEMBL top hitse value%identityAlignment
A0A0A0L5L0 Uncharacterized protein3.2e-4588.89Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRS----SEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWA
        MSFISAFGESFGYIFFIVAD+IM+K+GIEAERKLRS    S+EDSK+ES+NKIK DRIMRLMAVAANVADL+IGLAEIEPNPFCNHTITLGISGLVSAWA
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRS----SEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWA

Query:  GWYRNWPS
        GWYRNWPS
Subjt:  GWYRNWPS

A0A1S3AXI0 peroxisomal membrane protein 11B2.0e-4793.27Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
        MSFISAFGESFGYIFFIVAD+IM+KQGIEAERKLRSS+EDSK+ES+NKIK DRIMRLMAVAANVADL+IGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR

Query:  NWPS
        NWPS
Subjt:  NWPS

A0A5D3DJ26 Component of oligomeric Golgi complex 72.0e-4793.27Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
        MSFISAFGESFGYIFFIVAD+IM+KQGIEAERKLRSS+EDSK+ES+NKIK DRIMRLMAVAANVADL+IGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR

Query:  NWPS
        NWPS
Subjt:  NWPS

A0A6J1CH97 peroxisomal membrane protein 11B1.2e-4486.54Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
        MSFISAFGESFGYIFFIV+DLI++K GIEAERKL+S EEDSK+ES++KI+GDR+MRLM VAANVADL+IGLAEIEPNPFCNHT+TLGISGLVSAWAGWYR
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR

Query:  NWPS
        NWPS
Subjt:  NWPS

A0A6J1FS40 peroxisomal membrane protein 11B2.4e-4591.43Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSE-EDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWY
        MSFISAFGESFGYIFFIVADLIM+KQGIEAERKL+SSE EDSK+E+V KI+GDR+MRLMAVAANVADLLI LAEIEPNPFCNHTITLGISGLVSAWAGWY
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSE-EDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWY

Query:  RNWPS
        RNWPS
Subjt:  RNWPS

SwissProt top hitse value%identityAlignment
Q01IH3 Peroxisomal membrane protein 11-41.0e-3772.12Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
        MSFISAFGES GY+FFI  DLIMI++G+  ERKL       K + V KI+ DR+MRLMA AANVADL+IG+A+IEPNPFCNH +TLGISGLVSAWAGWYR
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR

Query:  NWPS
        NWPS
Subjt:  NWPS

Q7XU74 Peroxisomal membrane protein 11-41.0e-3772.12Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR
        MSFISAFGES GY+FFI  DLIMI++G+  ERKL       K + V KI+ DR+MRLMA AANVADL+IG+A+IEPNPFCNH +TLGISGLVSAWAGWYR
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYR

Query:  NWPS
        NWPS
Subjt:  NWPS

Q9STY0 Peroxisomal membrane protein 11B2.0e-3669.16Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKE---SVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAG
        MSFISAFGESFGY FFI+ D I IKQ +++ +KL+ S ++ K+E    +++I+GD +MRLM ++ANVADLLI LAEI PNPFCNHTITLGISGLVSAWAG
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKE---SVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAG

Query:  WYRNWPS
        WYRNWPS
Subjt:  WYRNWPS

Arabidopsis top hitse value%identityAlignment
AT3G47430.1 peroxin 11B1.4e-3769.16Show/hide
Query:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKE---SVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAG
        MSFISAFGESFGY FFI+ D I IKQ +++ +KL+ S ++ K+E    +++I+GD +MRLM ++ANVADLLI LAEI PNPFCNHTITLGISGLVSAWAG
Subjt:  MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKE---SVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAG

Query:  WYRNWPS
        WYRNWPS
Subjt:  WYRNWPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTATATCAGCCTTTGGTGAGTCTTTTGGCTACATATTCTTCATAGTTGCTGATCTTATTATGATTAAACAAGGGATTGAGGCAGAGAGAAAGCTGAGAAGTTC
TGAAGAGGATTCAAAAAAAGAAAGTGTGAACAAAATCAAGGGTGATAGAATTATGAGGCTGATGGCAGTGGCAGCTAATGTTGCAGATTTGCTTATTGGATTGGCTGAGA
TTGAGCCCAATCCATTTTGCAACCATACAATCACTCTTGGGATAAGTGGGTTGGTCTCTGCTTGGGCTGGTTGGTATAGAAATTGGCCCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTTATATCAGCCTTTGGTGAGTCTTTTGGCTACATATTCTTCATAGTTGCTGATCTTATTATGATTAAACAAGGGATTGAGGCAGAGAGAAAGCTGAGAAGTTC
TGAAGAGGATTCAAAAAAAGAAAGTGTGAACAAAATCAAGGGTGATAGAATTATGAGGCTGATGGCAGTGGCAGCTAATGTTGCAGATTTGCTTATTGGATTGGCTGAGA
TTGAGCCCAATCCATTTTGCAACCATACAATCACTCTTGGGATAAGTGGGTTGGTCTCTGCTTGGGCTGGTTGGTATAGAAATTGGCCCTCTTAG
Protein sequenceShow/hide protein sequence
MSFISAFGESFGYIFFIVADLIMIKQGIEAERKLRSSEEDSKKESVNKIKGDRIMRLMAVAANVADLLIGLAEIEPNPFCNHTITLGISGLVSAWAGWYRNWPS