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HG10012413 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012413
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:20923960..20924354
RNA-Seq ExpressionHG10012413
SyntenyHG10012413
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]4.7e-1162.2Show/hide
Query:  MASTTALVAWKKVIFFALLLLAFNVSARELAAG-----TARESLLVTEMNGVM-GRRLIVRQLDIPRRGNYSPPPPRRHPPP
        MAS TALVAWKKV F   LL+A +VSARELA       TARE  + T  NGV+ G RLI RQLD   RG+YSPPPPR  PPP
Subjt:  MASTTALVAWKKVIFFALLLLAFNVSARELAAG-----TARESLLVTEMNGVM-GRRLIVRQLDIPRRGNYSPPPPRRHPPP
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1265.38Show/hide
Query:  MASTTALVAWKKVIFFALLLLAFNVSARELAAGTARESLLVTEM--NGVMGRRLIVRQLDIPRRGNYSPPPPRRHPPP
        MAS +A V WK+V+FFALLLLAFNVSAREL  GT   +  V EM     +GRRLI RQLD    GNYSPPPPRR PPP
Subjt:  MASTTALVAWKKVIFFALLLLAFNVSARELAAGTARESLLVTEM--NGVMGRRLIVRQLDIPRRGNYSPPPPRRHPPP
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-1162.2Show/hide
Query:  MASTTALVAWKKVIFFALLLLAFNVSARELAAG-----TARESLLVTEMNGV-MGRRLIVRQLDIPRRGNYSPPPPRRHPPP
        MAS TALVAWKKV F   LL+A +VSARELA       TARE  + T  NGV +G RLI RQLD   RG+YSPPPPR  PPP
Subjt:  MASTTALVAWKKVIFFALLLLAFNVSARELAAG-----TARESLLVTEMNGV-MGRRLIVRQLDIPRRGNYSPPPPRRHPPP
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1265.38Show/hide
Query:  MASTTALVAWKKVIFFALLLLAFNVSARELAAGTARESLLVTEM--NGVMGRRLIVRQLDIPRRGNYSPPPPRRHPPP
        MAS +A V WK+V+FFALLLLAFNVSAREL  GT   +  V EM     +GRRLI RQLD    GNYSPPPPRR PPP
Subjt:  MASTTALVAWKKVIFFALLLLAFNVSARELAAGTARESLLVTEM--NGVMGRRLIVRQLDIPRRGNYSPPPPRRHPPP
KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]9.4e-1267.65Show/hide
Query:  STTALVAWKKV-IFFALLLLAFNVSARELAAGTARESLLVTEMNGVMGRRLIVRQLDIPRRGNYSPPP
        +T A VAWKKV IFF LLLLA+N+SAREL A T  E  L TEMN V+ RRL VRQLD   RGNY PPP
Subjt:  STTALVAWKKV-IFFALLLLAFNVSARELAAGTARESLLVTEMNGVMGRRLIVRQLDIPRRGNYSPPP
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein4.6e-1267.65Show/hide
Query:  STTALVAWKKV-IFFALLLLAFNVSARELAAGTARESLLVTEMNGVMGRRLIVRQLDIPRRGNYSPPP
        +T A VAWKKV IFF LLLLA+N+SAREL A T  E  L TEMN V+ RRL VRQLD   RGNY PPP
Subjt:  STTALVAWKKV-IFFALLLLAFNVSARELAAGTARESLLVTEMNGVMGRRLIVRQLDIPRRGNYSPPP
A0A0A0LB11 Uncharacterized protein2.9e-0657.81Show/hide
Query:  VIFFALLLLAFNVSARELAAGTARESLLVTEMNGVMGRRLIVRQLDIPRRGNYSPPPPRRHPPP
        ++FF+LLLLAFN S   LA   ARE ++  E N  MGR+L  RQLD   +GNYSPPPP R PPP
Subjt:  VIFFALLLLAFNVSARELAAGTARESLLVTEMNGVMGRRLIVRQLDIPRRGNYSPPPPRRHPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACAACAGCTTTGGTTGCTTGGAAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAACGTTTCGGCAAGAGAACTCGCCGCTGGCACGGCTCGTGA
GTCGTTGTTGGTGACGGAGATGAATGGTGTGATGGGCAGAAGATTAATTGTTCGACAGTTGGATATCCCTAGGAGAGGAAATTATTCTCCTCCTCCTCCTCGTCGTCATC
CTCCTCCCTACTCCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAACAACAGCTTTGGTTGCTTGGAAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAACGTTTCGGCAAGAGAACTCGCCGCTGGCACGGCTCGTGA
GTCGTTGTTGGTGACGGAGATGAATGGTGTGATGGGCAGAAGATTAATTGTTCGACAGTTGGATATCCCTAGGAGAGGAAATTATTCTCCTCCTCCTCCTCGTCGTCATC
CTCCTCCCTACTCCTCCTAA
Protein sequenceShow/hide protein sequence
MASTTALVAWKKVIFFALLLLAFNVSARELAAGTARESLLVTEMNGVMGRRLIVRQLDIPRRGNYSPPPPRRHPPPYSS