; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012461 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012461
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionchromatin structure-remodeling complex protein BSH
Genome locationChr01:21444639..21448665
RNA-Seq ExpressionHG10012461
SyntenyHG10012461
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0000228 - nuclear chromosome (cellular component)
GO:0070603 - SWI/SNF superfamily-type complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR006939 - SNF5/SMARCB1/INI1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147636.1 chromatin structure-remodeling complex protein BSH [Cucumis sativus]4.9e-12897.92Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_008439008.1 PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo]4.1e-12797.08Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_022138105.1 chromatin structure-remodeling complex protein BSH isoform X1 [Momordica charantia]7.3e-12494.58Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPA+A AIREQLYEIA+QNVASARESRMSKKGRRGFEHVP SK GGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        G RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_023538812.1 chromatin structure-remodeling complex protein BSH [Cucurbita pepo subsp. pepo]9.9e-12192.5Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKII 
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNTLI+DQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIAVQNVASARESR+SKKGRRGFEHV  SKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_038898737.1 chromatin structure-remodeling complex protein BSH [Benincasa hispida]6.4e-12897.5Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVV+FAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY+GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

TrEMBL top hitse value%identityAlignment
A0A0A0L868 Uncharacterized protein2.4e-12897.92Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A1S3AXP6 chromatin structure-remodeling complex protein BSH isoform X12.0e-12797.08Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A5A7UEL5 Chromatin structure-remodeling complex protein BSH isoform X12.0e-12797.08Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1C8H9 chromatin structure-remodeling complex protein BSH isoform X13.5e-12494.58Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPA+A AIREQLYEIA+QNVASARESRMSKKGRRGFEHVP SK GGASVDLVKLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        G RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1FBE7 chromatin structure-remodeling complex protein BSH1.1e-12092.08Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKII 
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVNNTLI+DQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIA+QNVASARESR+SKKGRRGFEHV  SKTGGASVDL+KLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

SwissProt top hitse value%identityAlignment
P93045 Chromatin structure-remodeling complex protein BSH1.1e-10678.75Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR+ E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H   SK  G S+DL+KLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

Q5BIN2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 16.0e-2037.75Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLR
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +F++    DL L P  F+  IA +I+ Q+  + +    +  + +++I IKL++ 
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLR

Query:  VNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
        V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  VNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Q5U379 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A9.2e-2139.07Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLR
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P  F+  IA +I+ Q+  + +    D    +++I IKL++ 
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLR

Query:  VNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
        V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  VNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Q6DFM1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 15.4e-2139.07Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLR
        H  A        +E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+  + +    +  + +++I IKL++ 
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLR

Query:  VNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
        V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  VNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Q6GQ82 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 19.2e-2139.07Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLR
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+  + +    +  + +++I IKL++ 
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLR

Query:  VNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
        V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  VNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Arabidopsis top hitse value%identityAlignment
AT3G17590.1 transcription regulatory protein SNF5, putative (BSH)7.8e-10878.75Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR+ E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IKLDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H   SK  G S+DL+KLF
Subjt:  IKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

AT3G17590.2 transcription regulatory protein SNF5, putative (BSH)1.1e-10678.51Show/hide
Query:  MKASASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKI
        MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR+ E QDMY GEKI
Subjt:  MKASASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKI

Query:  IPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVK
        IPIKLDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H   SK  G S+DL+K
Subjt:  IPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVK

Query:  LFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        LF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  LFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTTCGGCCTCACCTCACTCAAAAGCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGAATCTTGTGCCAATTCGTTTGGACATTGAAATCGACGGCCAGAGGTT
CAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCTCCGGCATTTATAACACAAATTG
CACAATCCATTCAATCACAACTTACAGAATTTCGATCCCTTGAAAGTCAAGATATGTATGCTGGTGAAAAGATTATTCCAATCAAGCTTGATCTCCGAGTGAACAATACA
CTCATAAAGGACCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGTATTGAAGACCCTGAAGTTGGACC
TGCAATTGCTTTTGCGATTAGAGAACAACTCTATGAGATAGCAGTACAGAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGCCGCCGAGGGTTCGAGCATG
TTCCAGTAAGTAAAACTGGAGGTGCTTCGGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGAAAGGACTGGGACATTTACGAACCAATTGTC
GATCTTCTATCCAACGAGGAAGTCGATGCCCTTGAAGCAAAAGAAGAGAGAACTGCTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTTCGGCCTCACCTCACTCAAAAGCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGAATCTTGTGCCAATTCGTTTGGACATTGAAATCGACGGCCAGAGGTT
CAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCTCCGGCATTTATAACACAAATTG
CACAATCCATTCAATCACAACTTACAGAATTTCGATCCCTTGAAAGTCAAGATATGTATGCTGGTGAAAAGATTATTCCAATCAAGCTTGATCTCCGAGTGAACAATACA
CTCATAAAGGACCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGTATTGAAGACCCTGAAGTTGGACC
TGCAATTGCTTTTGCGATTAGAGAACAACTCTATGAGATAGCAGTACAGAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGCCGCCGAGGGTTCGAGCATG
TTCCAGTAAGTAAAACTGGAGGTGCTTCGGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGAAAGGACTGGGACATTTACGAACCAATTGTC
GATCTTCTATCCAACGAGGAAGTCGATGCCCTTGAAGCAAAAGAAGAGAGAACTGCTCGATAA
Protein sequenceShow/hide protein sequence
MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKLDLRVNNT
LIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIV
DLLSNEEVDALEAKEERTAR