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HG10012495 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012495
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:21801292..21801612
RNA-Seq ExpressionHG10012495
SyntenyHG10012495
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_037439691.1 uncharacterized protein LOC119307722 isoform X1 [Triticum dicoccoides]1.5e-0435.06Show/hide
Query:  MHCDVAFKLNEHILGIGGVIGSSSGQLIASLCEFRAFSGNVLGVEAFVVVEGLHLADHMGLSHLLLLSNSLELIQIL
        ++ D ++ ++E     G V+  SSG  IA+ C FR ++ +V  +EA  ++EGL LA+H+G+  L++ S+S E++Q +
Subjt:  MHCDVAFKLNEHILGIGGVIGSSSGQLIASLCEFRAFSGNVLGVEAFVVVEGLHLADHMGLSHLLLLSNSLELIQIL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGACCTTCGAGATATTAATCTTAAGGTCATGCACTGTGATGTTGCTTTTAAGTTGAATGAGCATATTCTTGGTATTGGTGGCGTTATTGGATCATCTTCTGGGCA
GCTTATTGCTTCTCTTTGTGAGTTTCGTGCTTTTTCTGGTAATGTGCTCGGTGTCGAGGCTTTTGTGGTTGTGGAGGGTTTGCATTTGGCTGATCATATGGGTCTTTCTC
ATTTATTGTTGTTGTCTAATTCACTTGAGTTGATCCAAATTCTTAATGGTTTCACAGTCGCTCCGGCTGAAGTGGTCAATTGTGTTGCTGATATTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGACCTTCGAGATATTAATCTTAAGGTCATGCACTGTGATGTTGCTTTTAAGTTGAATGAGCATATTCTTGGTATTGGTGGCGTTATTGGATCATCTTCTGGGCA
GCTTATTGCTTCTCTTTGTGAGTTTCGTGCTTTTTCTGGTAATGTGCTCGGTGTCGAGGCTTTTGTGGTTGTGGAGGGTTTGCATTTGGCTGATCATATGGGTCTTTCTC
ATTTATTGTTGTTGTCTAATTCACTTGAGTTGATCCAAATTCTTAATGGTTTCACAGTCGCTCCGGCTGAAGTGGTCAATTGTGTTGCTGATATTTTATAA
Protein sequenceShow/hide protein sequence
MYDLRDINLKVMHCDVAFKLNEHILGIGGVIGSSSGQLIASLCEFRAFSGNVLGVEAFVVVEGLHLADHMGLSHLLLLSNSLELIQILNGFTVAPAEVVNCVADIL