; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012536 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012536
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationChr01:22209212..22213379
RNA-Seq ExpressionHG10012536
SyntenyHG10012536
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582197.1 hypothetical protein SDJN03_22199, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8567.58Show/hide
Query:  MKLSPILFSFLLALSVSACNF-------SAAGGFDLLLQPSYAAESPRGD-PWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGS
        MKLSP LFSFLLALSVSA  F       SA GGFD L      A  P G+ P  G  VF+VNDYGAVADGKT+NSLAFM AWE+AC +KG S+ LI EG+
Subjt:  MKLSPILFSFLLALSVSACNF-------SAAGGFDLLLQPSYAAESPRGD-PWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGS

Query:  FFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTY
        F V  +TFSGPCFN+LSPKVLI  TLIAPT  TTDVWI F  LR L+L+G D SA+L+GQGAQTWS GSACR+RMTC +F TSSSVKL ++N+RNISGTY
Subjt:  FFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTY

Query:  NTEFAVNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF
        NT+ AVNI CSST PC N+ LS INLT T P E  E+GRFNC GALN FT+LNSTF
Subjt:  NTEFAVNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF

KAG6597551.1 Exopolygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]3.0e-8867.19Show/hide
Query:  MKLSP-ILFSFLLALSVSACNF-------SAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGS
        MKLS  ++F FLLA+SVS  NF       SAAG +D LL P   AE P GDPW GL VFDV DYGA+ADGKT+NSLAFM AWEDAC Y+GSS LLI EGS
Subjt:  MKLSP-ILFSFLLALSVSACNF-------SAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGS

Query:  FFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTY
        FF+  + FSGPCF DLSPKV+ILGTLIAPTT T DVWI F+ LR L ++G   S ILDGQGA+TW  G  CR R++C +F TSS VKL +INI+NISGTY
Subjt:  FFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTY

Query:  NTEFAVNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF
        N+EFAVN+QCSS  PCENVQLS INLT  +P E  +IGRFNCKG+LN+F+ILNSTF
Subjt:  NTEFAVNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF

KAG7028995.1 Exopolygalacturonase-like 8, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-6740Show/hide
Query:  MKLSP-ILFSFLLALSVSACNF-------SAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGS
        MKLS  ++F FLLA+SVS  NF       SAAG +D LL P   AE P GDPW GL VFDV DYGA+ADGKT+NSLAFM AWEDAC Y+GSS LLI EGS
Subjt:  MKLSP-ILFSFLLALSVSACNF-------SAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGS

Query:  FFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFAT------------------
        FF+  + FSGPCF DLSPKV+ILGTLIAPTT T DVWI F+ LR L ++G   S ILDGQGA+TW  G  CR R++C +F T                  
Subjt:  FFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFAT------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------SSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINL
                                                                SS VKL +INI+NISGTYN+EFAVN+QCSS  PCENVQLS INL
Subjt:  --------------------------------------------------------SSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINL

Query:  TPTQPLEIGEIGRFNCKGALNDFTILNSTF
        T  +P E  +IGRFNCKG+LN+F+ILNSTF
Subjt:  TPTQPLEIGEIGRFNCKGALNDFTILNSTF

XP_023539060.1 exopolygalacturonase-like [Cucurbita pepo subsp. pepo]8.5e-6740.23Show/hide
Query:  MKLSP-ILFSFLLALSVSACNF-------SAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGS
        MKLS  I+F FLLA+SVS  NF       SAAG +D LL P   AE P GDPW GL VFDV DYGA+ADGKT+NSLAFM AWEDAC Y+GSS LLI EGS
Subjt:  MKLSP-ILFSFLLALSVSACNF-------SAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGS

Query:  FFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFAT------------------
        FF+  + FSGPCF DLSPKV+ILGTLIAPTT T DVWI F+ LR L ++G   S ILDGQGA+TW  G  CR R++C +F T                  
Subjt:  FFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFAT------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------SSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINL
                                                                SS VKL +INI+NISGTYN+EFAVN+QCSS  PCENVQLS INL
Subjt:  --------------------------------------------------------SSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINL

Query:  TPTQPLEIGEIGRFNCKGALNDFTILNSTF
        T  +P E  +IGRFNCKG+LN+F+ILNSTF
Subjt:  TPTQPLEIGEIGRFNCKGALNDFTILNSTF

XP_038885913.1 exopolygalacturonase-like [Benincasa hispida]4.3e-8747.27Show/hide
Query:  MKLSPILFSFLLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTF
        MKLS ++FSFLLALS+SA NFSAAG FD LL PSY+AESP GDPWMGLRVFDVNDYGA+ADGKT+NSLAFM+AWEDACGY GSSM+LI EG+FFVD +TF
Subjt:  MKLSPILFSFLLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTF

Query:  SGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFAT--------------------------
        SGPCFND+SPKVLILGTLIAPT+   D WIRFQ LRR IL+GG+ SAILDGQGA TWSSGSACR RMTC  FAT                          
Subjt:  SGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFAT--------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------SSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINLTPTQPLEIG
                                                       SSSVKL DINIRNISGTYNTEFAVNIQCS+T PCEN QLS INLT  QP +  
Subjt:  -----------------------------------------------SSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINLTPTQPLEIG

Query:  EIGRFNCKGALNDFTILNSTF
        +IG FNCKGALN FTI NSTF
Subjt:  EIGRFNCKGALNDFTILNSTF

TrEMBL top hitse value%identityAlignment
A0A0A0L932 Uncharacterized protein1.2e-6340.43Show/hide
Query:  LFSFLLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFN
        LFS LLA+++     SAA GFD+ L PSY AE P GDPW GLRVFDVNDYG VADGKT+NSLA M AWEDAC ++G SMLLI EG++FVD +TFSGPCFN
Subjt:  LFSFLLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFN

Query:  DLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFA---------------------------------
        DLSPKVLILGTLIAPT  T DVWI F  LRRL L+ G  S  LDG+GAQTWSSGS CR  MTC MFA                                 
Subjt:  DLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFA---------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------TSSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINLT-------PTQPLEI
                                                 SSSVKL DINIRNISGTYN+EFA+N++CSST  CEN++LS INLT         +  E 
Subjt:  ----------------------------------------TSSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINLT-------PTQPLEI

Query:  GEI-GRFNCKGALNDFTILNSTF
        G++ G FN KGALN FTI NSTF
Subjt:  GEI-GRFNCKGALNDFTILNSTF

A0A5A7U2P8 Exopolygalacturonase-like7.0e-5958.33Show/hide
Query:  MKLSP--ILFSFLLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNL
        MKLS   +LFSFLLA    A NFSAA GFD+ L PSY  E P GDPW GLRVFDV+DYGAVADGKT+++LA M AWEDAC  +G SMLLI EG++ VD +
Subjt:  MKLSP--ILFSFLLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNL

Query:  TFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTYNTEFAV
        T SGPCF+DLSPKVLILGTLIAPT  T DVWI F  L RL L+ G  S I DGQGAQTWSSGSACR+ +TC MFAT   + L           Y + FA 
Subjt:  TFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTYNTEFAV

Query:  NIQCSSTTPCENVQLSNINLTPTQPLEI
         +Q    +   N  +SNINL  ++   +
Subjt:  NIQCSSTTPCENVQLSNINLTPTQPLEI

A0A6J1FMM1 exopolygalacturonase-like2.1e-4234.94Show/hide
Query:  MTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCK
        M AWEDAC Y+GSS LLI EGSFF+  + FSGPCF DLSPKV+ILGTLIAPTT T DVWI F+ LR L ++G   S ILDGQGA+TW  G  CR R++C 
Subjt:  MTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCK

Query:  MFAT------------------------------------------------------------------------------------------------
        +F T                                                                                                
Subjt:  MFAT------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------SSSVKLRDINIRNISGTYNTEF
                                                                                      SS VKL +INI+NISGTYN+EF
Subjt:  ------------------------------------------------------------------------------SSSVKLRDINIRNISGTYNTEF

Query:  AVNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF
        AVN+QCSS  PCENVQLS INLT  +P E  +IGRFNCKG+LN+F+ILNSTF
Subjt:  AVNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF

A0A6J1GXB0 exopolygalacturonase-like1.1e-4335.9Show/hide
Query:  MTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCK
        M AWE+AC +KG S+ LI EG+F V  +TFSGPCFN+LSPKVLI  TLIAPT  TTDVWI F  LR L+L+G D SA+L+GQGAQTWS GSACR+RMTC 
Subjt:  MTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCK

Query:  MFAT------------------------------------------------------------------------------------------------
        +F T                                                                                                
Subjt:  MFAT------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------SSSVKLRDINIRNISGTYNTEFA
                                                                                     SSSVKL ++N+RNISGTYNT+FA
Subjt:  -----------------------------------------------------------------------------SSSVKLRDINIRNISGTYNTEFA

Query:  VNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF
        VNI CSS  PC NV LS INLT T P E  EIGRFNC GALN FT+LNSTF
Subjt:  VNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF

A0A6J1I855 exopolygalacturonase-like6.0e-4234.66Show/hide
Query:  MTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCK
        M AWEDAC Y+GSS  LI EGSFF+  + FSGPCF DLSPKV+ILGTLIAPTT T DVWI F+ LR+L ++G   S ILDGQGA+TW  G  CR R++C 
Subjt:  MTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCK

Query:  MFAT------------------------------------------------------------------------------------------------
        +F T                                                                                                
Subjt:  MFAT------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------SSSVKLRDINIRNISGTYNTEF
                                                                                      SS VKL +INI+NISGTYN+EF
Subjt:  ------------------------------------------------------------------------------SSSVKLRDINIRNISGTYNTEF

Query:  AVNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF
        AVN+QCSS  PCENVQLS INLT  +P E  +IGRFNCKG+LN+F+ILNSTF
Subjt:  AVNIQCSSTTPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF

SwissProt top hitse value%identityAlignment
P48979 Polygalacturonase3.0e-1435.29Show/hide
Query:  FDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPT----TPTTDVWIRFQFLRRLILSGGDRS
        ++V   GA ADGKTD++ AF++AW  AC      ++ +  G+FF+ ++ FSGPC N+ +    I GTL+AP+          WI F  +  + +SGG   
Subjt:  FDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPT----TPTTDVWIRFQFLRRLILSGGDRS

Query:  AILDGQGAQTWS----SGSACRQRMTCKMFATSSSV
         ILDGQG   W+     G +C    T   F+ S+++
Subjt:  AILDGQGAQTWS----SGSACRQRMTCKMFATSSSV

P49062 Exopolygalacturonase clone GBGE1843.9e-1428.87Show/hide
Query:  LLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSP
        L+AL   +C    A G  L  +   AA S  G+P     V+D+  +GAV DG T+   AF+  W   C     + LL+ +G+F    + F+GPC + ++ 
Subjt:  LLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSP

Query:  KVLILGTLIAPTTP-TTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVK-LRDINIRNISGTYNTEFAVNIQCSSTTPC
         V ++GT+IA T+   T  W  F+ +  L+L+G   +    G+G   W +   C +++ C +  TS   + ++++ I  IS      F + +        
Subjt:  KVLILGTLIAPTTP-TTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVK-LRDINIRNISGTYNTEFAVNIQCSSTTPC

Query:  ENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNST
        ENV + NI L  T P E       +   A ++ +IL+ST
Subjt:  ENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNST

P49063 Exopolygalacturonase clone GBGA4839.6e-1330.69Show/hide
Query:  DVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDV----WIRFQFLRRLILSGGDRSA
        DV   GA  D KTD+S AF  AW++AC     S + + +G + V++L F GPC   ++  + + G   AP T  T      WI F+ +    L+G    A
Subjt:  DVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTDV----WIRFQFLRRLILSGGDRSA

Query:  ILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINL-TPTQPLEIG--EIGRFN
        I DGQG+  W +    +      +        L +  I +I+ T +  F +NI       C+N+ LS+I +  P + L      IGR N
Subjt:  ILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINL-TPTQPLEIG--EIGRFN

Q7M1E7 Polygalacturonase7.8e-1535.76Show/hide
Query:  VFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTP----TTDVWIRFQFLRRLILSGGDR
        VF+V  YGAV DGK D++ AF T W  AC    + +L+     FFV+NL F GPC   LS KV   GT++A   P     + +W++F  L    L G   
Subjt:  VFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTP----TTDVWIRFQFLRRLILSGGDR

Query:  SAILDGQGAQTW-------SSGSAC--RQRMTCKMFATSSSVKLRDINIRN
        + ++DGQG Q W       +  + C  R R T      S SV ++++ + N
Subjt:  SAILDGQGAQTW-------SSGSAC--RQRMTCKMFATSSSVKLRDINIRN

Q8RY29 Polygalacturonase ADPG29.2e-1630.37Show/hide
Query:  VNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEG-SFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPT----TDVWIRFQFLRRLILSGGDRSA
        V+D+GA  DGKTD++ AF+ AW+ AC   G+  LL+ +G ++ + ++  +GPC + L+  V I GTL A    +       WI F  +  L + GGD + 
Subjt:  VNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEG-SFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPT----TDVWIRFQFLRRLILSGGDRSA

Query:  ILDGQGAQTW------SSGSACRQRMTCKMFATSSSVKLRDINIRNISG-TYNTEFAVNIQCSS---TTPCENVQLSNINLTPTQPLEIGE
        ++DG G   W      +    C +  T   F  S S+ ++++ +RN      + E   N+Q S+   T P ++     I++T TQ + + E
Subjt:  ILDGQGAQTW------SSGSACRQRMTCKMFATSSSVKLRDINIRNISG-TYNTEFAVNIQCSS---TTPCENVQLSNINLTPTQPLEIGE

Arabidopsis top hitse value%identityAlignment
AT1G17150.1 Pectin lyase-like superfamily protein2.4e-1929.88Show/hide
Query:  RVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTD-----VWIRFQFLRRLILSGG
        +VFDV  YGA  DGK DN+ AF  AW+DAC + G S + I  G+F++  +TF GPC   +S   +I GTL+AP  P  D     +WI F+++  L + G 
Subjt:  RVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTTD-----VWIRFQFLRRLILSGG

Query:  DRSAILDGQGAQTWSSGSACRQRMTCKMFATSSS---VKLRDIN----IRNISGTYN-------TEFAVNIQCSSTTP---------CENVQLSNINLT-
             LDGQG ++WS    C++   C   A +     VK   +N    + + +G +N       +   VNI   S +P           N+Q+SN +++ 
Subjt:  DRSAILDGQGAQTWSSGSACRQRMTCKMFATSSS---VKLRDIN----IRNISGTYN-------TEFAVNIQCSSTTP---------CENVQLSNINLT-

Query:  ----------------------PTQPLEIGEIGRFNCKGALNDFTILNSTF
                              P   + IG +G+   +  +N   + NS F
Subjt:  ----------------------PTQPLEIGEIGRFNCKGALNDFTILNSTF

AT1G78400.1 Pectin lyase-like superfamily protein8.6e-2541.94Show/hide
Query:  SAAGGFDLLLQPSYAAESPRGDP---WMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTL
        S   GF L+L  +  A S    P    +G +VFDV  YGA  DGKTDN++AF  AW+DAC +KG   + I  G+F++  + F+GPC + +S   +I GTL
Subjt:  SAAGGFDLLLQPSYAAESPRGDP---WMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTL

Query:  IAPTTPTT---DVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCK
        +AP  P     D WI F+++  L +SGG    ILDGQG+ +W   + CRQ   C+
Subjt:  IAPTTPTT---DVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCK

AT1G78400.1 Pectin lyase-like superfamily protein3.1e-0646.81Show/hide
Query:  FATSSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINL
        F + S +++RD+  +NI GT   + AV +QCS   PC+NVQL NIN+
Subjt:  FATSSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINL

AT2G15460.1 Pectin lyase-like superfamily protein6.3e-2028.4Show/hide
Query:  RVFDVNDYGAVADGKTDNSLAFMTAWEDAC-GYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPT---TDVWIRFQFLRRLILSGGD
        +VF+V  +GA  DGKTDN+ AF + W  AC    GSS + + +G+F++  + F GPC N +  + +I GTL+AP  P+    D WI F+++  L +SG  
Subjt:  RVFDVNDYGAVADGKTDNSLAFMTAWEDAC-GYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPT---TDVWIRFQFLRRLILSGGD

Query:  RSAILDGQGAQTWSSGSACRQRMTCKM------FATSSSVKLRDINIRNISGTYNTEFAV----------------------------NIQCSST-----
         S  LDGQG Q+W     C     C        FA  ++  ++DI   N    +   F+V                            NIQ S T     
Subjt:  RSAILDGQGAQTWSSGSACRQRMTCKM------FATSSSVKLRDINIRNISGTYNTEFAV----------------------------NIQCSST-----

Query:  -------TPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF
               +   N+ +SN+N  P   + +G +G+   +  + D  + +  F
Subjt:  -------TPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF

AT2G26620.1 Pectin lyase-like superfamily protein1.3e-2034.01Show/hide
Query:  RVFDVNDYGAVADGKTDNSLAFMTAWEDAC-GYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPT---TDVWIRFQFLRRLILSGGD
        +VF+V  +G+  DGKTDN+ AF + W  AC    GSS + + +G+F++  + F GPC N +  + +I GTL+AP  P     D WI F+++  L +SG  
Subjt:  RVFDVNDYGAVADGKTDNSLAFMTAWEDAC-GYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPT---TDVWIRFQFLRRLILSGGD

Query:  RSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVK-LRDINIRNIS------GTYNTEF-------AVNIQCSSTTP---------CENVQLSNINL
         S  LDGQG Q+W     C +   C   A S     + + NI++I+      G +N  F        V I   S +P         C N+Q+SN N+
Subjt:  RSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVK-LRDINIRNIS------GTYNTEF-------AVNIQCSSTTP---------CENVQLSNINL

AT4G13760.1 Pectin lyase-like superfamily protein2.8e-2028.24Show/hide
Query:  PWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYK-GSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTT---DVWIRFQFLRRLI
        P +  ++F+V  +G+ +DGKTDN+  F + W  AC  K GSS + + +G+F++  + F GPC N +  + LI GTL+AP  P     D WI+F+++  L 
Subjt:  PWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYK-GSSMLLIGEGSFFVDNLTFSGPCFNDLSPKVLILGTLIAPTTPTT---DVWIRFQFLRRLI

Query:  LSGGDRSAILDGQGAQTWSSGSACRQRMTCKM------FATSSSVKLRDINIRNISGTYNTEFAV----------------------------NIQCSST
        +SG   S  LDGQG Q+W     C +   C        FA  ++  ++DI   N    +   F+V                            NI  S+T
Subjt:  LSGGDRSAILDGQGAQTWSSGSACRQRMTCKM------FATSSSVKLRDINIRNISGTYNTEFAV----------------------------NIQCSST

Query:  ------------TPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF
                    +   N+ +SN+N  P   + +G +G+   +  + D TI +  F
Subjt:  ------------TPCENVQLSNINLTPTQPLEIGEIGRFNCKGALNDFTILNSTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTTCACCAATTTTATTCTCTTTTCTTCTGGCCCTCTCTGTATCTGCCTGCAATTTCTCCGCCGCCGGTGGATTTGATTTACTTCTCCAGCCGTCGTACGCGGC
GGAGTCCCCGCGCGGAGATCCTTGGATGGGACTGCGTGTTTTTGATGTAAATGATTATGGGGCAGTTGCTGATGGGAAGACAGACAACAGCTTGGCATTCATGACGGCGT
GGGAAGACGCATGTGGTTACAAAGGAAGCTCCATGTTATTAATAGGAGAGGGCAGTTTCTTCGTGGACAACCTTACATTTTCAGGCCCATGTTTCAATGACCTTTCTCCC
AAAGTCCTCATTTTAGGCACTTTGATTGCTCCCACCACCCCCACCACCGACGTTTGGATCCGCTTCCAATTCCTCCGCCGCCTCATTCTCTCCGGCGGTGATAGATCCGC
CATTCTCGATGGCCAGGGTGCCCAAACCTGGTCATCCGGTTCTGCTTGTCGTCAACGCATGACTTGCAAAATGTTTGCCACGTCATCAAGTGTGAAGCTGCGTGATATCA
ACATAAGAAACATAAGTGGAACTTACAACACTGAGTTTGCAGTTAATATACAATGTAGCTCAACTACGCCTTGCGAGAACGTTCAACTTTCTAACATCAATCTCACTCCT
ACTCAGCCACTAGAAATTGGTGAAATCGGCCGCTTCAATTGCAAGGGTGCTCTCAATGACTTCACCATTCTTAATTCAACATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTTCACCAATTTTATTCTCTTTTCTTCTGGCCCTCTCTGTATCTGCCTGCAATTTCTCCGCCGCCGGTGGATTTGATTTACTTCTCCAGCCGTCGTACGCGGC
GGAGTCCCCGCGCGGAGATCCTTGGATGGGACTGCGTGTTTTTGATGTAAATGATTATGGGGCAGTTGCTGATGGGAAGACAGACAACAGCTTGGCATTCATGACGGCGT
GGGAAGACGCATGTGGTTACAAAGGAAGCTCCATGTTATTAATAGGAGAGGGCAGTTTCTTCGTGGACAACCTTACATTTTCAGGCCCATGTTTCAATGACCTTTCTCCC
AAAGTCCTCATTTTAGGCACTTTGATTGCTCCCACCACCCCCACCACCGACGTTTGGATCCGCTTCCAATTCCTCCGCCGCCTCATTCTCTCCGGCGGTGATAGATCCGC
CATTCTCGATGGCCAGGGTGCCCAAACCTGGTCATCCGGTTCTGCTTGTCGTCAACGCATGACTTGCAAAATGTTTGCCACGTCATCAAGTGTGAAGCTGCGTGATATCA
ACATAAGAAACATAAGTGGAACTTACAACACTGAGTTTGCAGTTAATATACAATGTAGCTCAACTACGCCTTGCGAGAACGTTCAACTTTCTAACATCAATCTCACTCCT
ACTCAGCCACTAGAAATTGGTGAAATCGGCCGCTTCAATTGCAAGGGTGCTCTCAATGACTTCACCATTCTTAATTCAACATTTTAG
Protein sequenceShow/hide protein sequence
MKLSPILFSFLLALSVSACNFSAAGGFDLLLQPSYAAESPRGDPWMGLRVFDVNDYGAVADGKTDNSLAFMTAWEDACGYKGSSMLLIGEGSFFVDNLTFSGPCFNDLSP
KVLILGTLIAPTTPTTDVWIRFQFLRRLILSGGDRSAILDGQGAQTWSSGSACRQRMTCKMFATSSSVKLRDINIRNISGTYNTEFAVNIQCSSTTPCENVQLSNINLTP
TQPLEIGEIGRFNCKGALNDFTILNSTF