; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012564 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012564
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranslocator protein homolog
Genome locationChr01:22391368..22391886
RNA-Seq ExpressionHG10012564
SyntenyHG10012564
Gene Ontology termsGO:0018216 - peptidyl-arginine methylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004307 - TspO/MBR-related protein
IPR038330 - TspO/MBR-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134488.1 translocator protein homolog [Cucumis sativus]8.4e-8291.28Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIA IFLFGRS+RH+PNRNRPIWI PLWL+ LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        IAHLSLSVVWNPLVLVIRSVVIAFLFCVLD VTLFACY  FK+VNPFAKDL+KPCLAWTAYLSAVTYVFIDL
Subjt:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

XP_016898980.1 PREDICTED: translocator protein homolog [Cucumis melo]1.0e-8292.44Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI PLWLL LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        IAHLSLSVVW+PLVLVIRSVVIAFLFCVLDFVTLFACYR F++VNPFAKDL+KPCLAWTAYLSAVTYVFI L
Subjt:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]2.9e-8292.35Show/hide
Query:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+APLWLLHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        HLSLSVVWNPLVLVIR++++AFLFCVLDFVTL+ACYRTFK+VNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  HLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]1.4e-8191.76Show/hide
Query:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+APLWLLHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        HLSLSVVWNPLVLVIR++++AFLFCVLD VTL+ACYRTFK+VNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  HLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

XP_038878873.1 translocator protein homolog [Benincasa hispida]1.3e-8797.67Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRSARHFPNRNRPIWI PLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        IAHLSLSVVWNPLVLVIRSVV+AFLFCVLDFVTLFACYRTFK+VNPFAKDLIKPCLAWTAYLSAVTYVFIDL
Subjt:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

TrEMBL top hitse value%identityAlignment
A0A0A0L583 Uncharacterized protein4.1e-8291.28Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIA IFLFGRS+RH+PNRNRPIWI PLWL+ LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        IAHLSLSVVWNPLVLVIRSVVIAFLFCVLD VTLFACY  FK+VNPFAKDL+KPCLAWTAYLSAVTYVFIDL
Subjt:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

A0A1S4DTF2 translocator protein homolog4.8e-8392.44Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI PLWLL LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        IAHLSLSVVW+PLVLVIRSVVIAFLFCVLDFVTLFACYR F++VNPFAKDL+KPCLAWTAYLSAVTYVFI L
Subjt:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

A0A5D3CWC4 Translocator protein-like protein4.8e-8392.44Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI PLWLL LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        IAHLSLSVVW+PLVLVIRSVVIAFLFCVLDFVTLFACYR F++VNPFAKDL+KPCLAWTAYLSAVTYVFI L
Subjt:  IAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

A0A6J1FZS9 translocator protein homolog2.0e-8191.76Show/hide
Query:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+APLWLLHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        HLSLSVVWNPLVLVIR+ ++AFLFCVLD VTL+ACYRTFK+VNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  HLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

A0A6J1ICB9 translocator protein homolog1.4e-8292.35Show/hide
Query:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+APLWLLHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL
        HLSLSVVWNPLVLVIR++++AFLFCVLDFVTL+ACYRTFK+VNPFAKDLIKPCLAWTAYL AVTYVFIDL
Subjt:  HLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL

SwissProt top hitse value%identityAlignment
E2RDM9 Translocator protein 21.9e-0429.66Show/hide
Query:  AVSVAIPLFLTIAVIFLF-GRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVV--I
        A+ VA+P    I V  L   R  R +    +P W  P  +L    I   F++G A++LVW D GG  G   ALPL +  + L+V W  L+    +    +
Subjt:  AVSVAIPLFLTIAVIFLF-GRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVV--I

Query:  AFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTY
        A L  +L +  + +    +  +N  A  L+ P LAW    +++ Y
Subjt:  AFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTY

O82245 Translocator protein homolog7.1e-3143.31Show/hide
Query:  KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSV
        K + + K   AKR L+SL V+VA P+ +T+   +  G S  +        WI PLWLLH + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSV

Query:  VWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAV
        VW+P+   + S V      +     LF CY+ F +++P A +L+KPCLAW A+++AV
Subjt:  VWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAV

Q9GMC9 Translocator protein6.6e-0528.91Show/hide
Query:  FLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNA-LPLYIAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYR
        ++ G   R + +  +P W  P W+L          +G  ++L+W + GGF   +   L LY   L+L+  W PL    R +  AF+  +L      A   
Subjt:  FLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNA-LPLYIAHLSLSVVWNPLVLVIRSVVIAFLFCVLDFVTLFACYR

Query:  TFKQVNPFAKDLIKPCLAWTAYLSAVTY
         ++QV+P A  L+ P LAW A+ + + Y
Subjt:  TFKQVNPFAKDLIKPCLAWTAYLSAVTY

Arabidopsis top hitse value%identityAlignment
AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related5.0e-3243.31Show/hide
Query:  KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSV
        K + + K   AKR L+SL V+VA P+ +T+   +  G S  +        WI PLWLLH + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSV

Query:  VWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAV
        VW+P+   + S V      +     LF CY+ F +++P A +L+KPCLAW A+++AV
Subjt:  VWNPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCCAATCCGCCGTTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCCCTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTCAC
AATCGCCGTCATCTTCCTCTTCGGCCGCTCCGCTCGCCATTTCCCCAACCGGAACCGTCCGATTTGGATAGCGCCGCTCTGGCTCCTCCATCTCTCCTCTATTGGCTCCT
CCTTTCTAATTGGCCTCGCCGCTTGGCTCGTTTGGGCGGATGGTGGTTTCCACGGCGGTTCCAATGCTCTTCCGCTCTACATCGCTCATCTTTCTCTTAGCGTCGTTTGG
AATCCTCTGGTGCTCGTGATTCGCTCTGTTGTGATTGCGTTTCTGTTCTGCGTTTTGGATTTTGTTACTCTGTTTGCTTGTTATCGGACTTTCAAGCAAGTCAATCCCTT
CGCTAAGGATCTGATTAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACTTACGTGTTCATTGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTTCCAATCCGCCGTTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCCCTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTCAC
AATCGCCGTCATCTTCCTCTTCGGCCGCTCCGCTCGCCATTTCCCCAACCGGAACCGTCCGATTTGGATAGCGCCGCTCTGGCTCCTCCATCTCTCCTCTATTGGCTCCT
CCTTTCTAATTGGCCTCGCCGCTTGGCTCGTTTGGGCGGATGGTGGTTTCCACGGCGGTTCCAATGCTCTTCCGCTCTACATCGCTCATCTTTCTCTTAGCGTCGTTTGG
AATCCTCTGGTGCTCGTGATTCGCTCTGTTGTGATTGCGTTTCTGTTCTGCGTTTTGGATTTTGTTACTCTGTTTGCTTGTTATCGGACTTTCAAGCAAGTCAATCCCTT
CGCTAAGGATCTGATTAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTGTTACTTACGTGTTCATTGATCTTTGA
Protein sequenceShow/hide protein sequence
MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIAPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW
NPLVLVIRSVVIAFLFCVLDFVTLFACYRTFKQVNPFAKDLIKPCLAWTAYLSAVTYVFIDL