| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 2.2e-33 | 65.42 | Show/hide |
Query: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
+ IPS ++ L +N+AID+LRFLGDVGETDIHLL++ILPHCTVDQL+H+E SS+GRDLTP+TD LWK FYE++FGK + +V+ERM+ K +F+W QLYEA
Subjt: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
Query: KMEALEE
KME +E+
Subjt: KMEALEE
|
|
| XP_022149769.1 transcription elongation factor B polypeptide 3 [Momordica charantia] | 1.7e-33 | 66.36 | Show/hide |
Query: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
+ IPS ++ L +N AID+LRFLGDVGETDIHLLE+ILPHCT+DQL+H+E SSKGRDLTP+TD LWK FYE++FGK++ ++V+ RM+ K SF+W QLYEA
Subjt: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
Query: KMEALEE
K+E LE+
Subjt: KMEALEE
|
|
| XP_031743455.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis sativus] | 2.2e-33 | 65.42 | Show/hide |
Query: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
+ IPS ++ L +N+AID+LRFLGDVGETDIHLL++ILPHCTVDQL+H+E SS+GRDLTP+TD LWK FYE++FGK + +V+ERM+ K +F+W QLYEA
Subjt: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
Query: KMEALEE
KME +E+
Subjt: KMEALEE
|
|
| XP_038885873.1 uncharacterized protein LOC120076176 [Benincasa hispida] | 1.1e-45 | 79.13 | Show/hide |
Query: MCGEVTKTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKW
MC EV+K SFL+H SINEAIDSLRFLGDVG+TD+H+LE+ILPHCTVDQL+HIE+SSKGRDLTP+TD LWKNFYEKKFGKN+ D V+++MK+K ESFKW
Subjt: MCGEVTKTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKW
Query: KQLYEAKMEALEEKA
KQLYEAKMEALE+KA
Subjt: KQLYEAKMEALEEKA
|
|
| XP_038885879.1 uncharacterized protein LOC120076185 [Benincasa hispida] | 2.4e-43 | 76.52 | Show/hide |
Query: MCGEVTKTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKW
MC EV+K SFL+H SINEAID+LRFL DVG+TD+H+L++ILPHCTVDQL+HIE+SSKGRDLT +TD LWKNFY KKFGKN+FD +ERMK+K ESFKW
Subjt: MCGEVTKTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKW
Query: KQLYEAKMEALEEKA
KQLYEAKMEALE+KA
Subjt: KQLYEAKMEALEEKA
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KGZ5 Uncharacterized protein | 1.1e-33 | 65.42 | Show/hide |
Query: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
+ IPS ++ L +N+AID+LRFLGDVGETDIHLL++ILPHCTVDQL+H+E SS+GRDLTP+TD LWK FYE++FGK + +V+ERM+ K +F+W QLYEA
Subjt: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
Query: KMEALEE
KME +E+
Subjt: KMEALEE
|
|
| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 1.8e-33 | 64.49 | Show/hide |
Query: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
+ IPS ++ L +N+AID++RFLGDVGETDIHLLE+ILPHCTVDQL+H+E SS+GRDLTP+TD LWK FYE++FGK + +V+ERM+ K +F+W QLYEA
Subjt: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
Query: KMEALEE
KM+ +E+
Subjt: KMEALEE
|
|
| A0A5A7ULV4 Transcription elongation factor B polypeptide 3 isoform X2 | 1.8e-33 | 64.49 | Show/hide |
Query: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
+ IPS ++ L +N+AID++RFLGDVGETDIHLLE+ILPHCTVDQL+H+E SS+GRDLTP+TD LWK FYE++FGK + +V+ERM+ K +F+W QLYEA
Subjt: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
Query: KMEALEE
KM+ +E+
Subjt: KMEALEE
|
|
| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 1.8e-33 | 64.49 | Show/hide |
Query: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
+ IPS ++ L +N+AID++RFLGDVGETDIHLLE+ILPHCTVDQL+H+E SS+GRDLTP+TD LWK FYE++FGK + +V+ERM+ K +F+W QLYEA
Subjt: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
Query: KMEALEE
KM+ +E+
Subjt: KMEALEE
|
|
| A0A6J1D807 transcription elongation factor B polypeptide 3 | 8.3e-34 | 66.36 | Show/hide |
Query: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
+ IPS ++ L +N AID+LRFLGDVGETDIHLLE+ILPHCT+DQL+H+E SSKGRDLTP+TD LWK FYE++FGK++ ++V+ RM+ K SF+W QLYEA
Subjt: KTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMKHKNESFKWKQLYEA
Query: KMEALEE
K+E LE+
Subjt: KMEALEE
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 1.1e-22 | 44.25 | Show/hide |
Query: VTKTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMK-HKNESFKWKQL
+TK PS ++ L + +AID+++++G VG D LLEQIL HCT++QL HIE ++ DL+PITD WK FY+K +G+ + ++E ++ +K FKW+ L
Subjt: VTKTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMK-HKNESFKWKQL
Query: YEAKMEALEEKAK
YE K+ A+++K K
Subjt: YEAKMEALEEKAK
|
|
| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 1.1e-22 | 44.25 | Show/hide |
Query: VTKTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMK-HKNESFKWKQL
+TK PS ++ L + +AID+++++G VG D LLEQIL HCT++QL HIE ++ DL+PITD WK FY+K +G+ + ++E ++ +K FKW+ L
Subjt: VTKTIPSFLNHLSINEAIDSLRFLGDVGETDIHLLEQILPHCTVDQLIHIESSSKGRDLTPITDNLWKNFYEKKFGKNNFDSVVERMK-HKNESFKWKQL
Query: YEAKMEALEEKAK
YE K+ A+++K K
Subjt: YEAKMEALEEKAK
|
|
