; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012566 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012566
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein RALF-like 33
Genome locationChr01:22396451..22396837
RNA-Seq ExpressionHG10012566
SyntenyHG10012566
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138185.1 protein RALF-like 33 [Momordica charantia]9.8e-4372.66Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSR
        M +S IHGFL++CAIS SYL  SSSTAVDFTGDRQFL LPPES CR   G IAEC LGG+ F FA        +  RILAT  RYISYGA+RRN+VPCSR
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSR

Query:  RGASYYNCQMGAPANPYSRGCSAITRCR
        RGASYYNC+ GAPANPYSRGCSAITRCR
Subjt:  RGASYYNCQMGAPANPYSRGCSAITRCR

XP_022138421.1 protein RALF-like 33 [Momordica charantia]4.9e-3461.72Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSR
        M+ S +   L   AI  ++L  SS+TA DF+GD + L++P +S CR   GSIAEC L G++  F  EFE+ S+I+RRILA T RYISYGA++RNSVPCSR
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSR

Query:  RGASYYNCQMGAPANPYSRGCSAITRCR
        RGASYYNCQ GA ANPY+RGCSAITRCR
Subjt:  RGASYYNCQMGAPANPYSRGCSAITRCR

XP_023000591.1 protein RALF-like 33 [Cucurbita maxima]8.6e-3158.46Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGE--EFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC
        M+ S +  FL   AI  ++   SS+  VDF+GD + L +P ES CR   GSIAEC L G+  +  F  EFE+ S+I+RRILA + RY+SYGA++RNSVPC
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGE--EFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC

Query:  SRRGASYYNCQMGAPANPYSRGCSAITRCR
        SRRGASYYNCQ GA ANPY RGC+AITRCR
Subjt:  SRRGASYYNCQMGAPANPYSRGCSAITRCR

XP_023006467.1 protein RALF-like 33 [Cucurbita maxima]8.6e-3157.69Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGG--EEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC
        M  S +   +   A+  ++   SS+TA+DF+GD + L  P +S CR   GSI EC L G  ++  F  EFE+ S+I+RRILATT RYISYGA+RRN+VPC
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGG--EEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC

Query:  SRRGASYYNCQMGAPANPYSRGCSAITRCR
        SRRGASYYNC+ GA ANPY+RGCSAITRCR
Subjt:  SRRGASYYNCQMGAPANPYSRGCSAITRCR

XP_038875155.1 protein RALF-like 33 [Benincasa hispida]8.6e-3159.23Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGG--EEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC
        M  S +   L   AI  ++   SS+TAVDF+GD + L +P +S CR   GSIAEC L G  ++  F  EF + S+I+RRILATT RYISYGA+RRN+VPC
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGG--EEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC

Query:  SRRGASYYNCQMGAPANPYSRGCSAITRCR
        SRRGASYYNC+ GA ANPY+RGC+AITRCR
Subjt:  SRRGASYYNCQMGAPANPYSRGCSAITRCR

TrEMBL top hitse value%identityAlignment
A0A6J1C8R0 protein RALF-like 334.8e-4372.66Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSR
        M +S IHGFL++CAIS SYL  SSSTAVDFTGDRQFL LPPES CR   G IAEC LGG+ F FA        +  RILAT  RYISYGA+RRN+VPCSR
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSR

Query:  RGASYYNCQMGAPANPYSRGCSAITRCR
        RGASYYNC+ GAPANPYSRGCSAITRCR
Subjt:  RGASYYNCQMGAPANPYSRGCSAITRCR

A0A6J1C9N4 protein RALF-like 332.4e-3461.72Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSR
        M+ S +   L   AI  ++L  SS+TA DF+GD + L++P +S CR   GSIAEC L G++  F  EFE+ S+I+RRILA T RYISYGA++RNSVPCSR
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSR

Query:  RGASYYNCQMGAPANPYSRGCSAITRCR
        RGASYYNCQ GA ANPY+RGCSAITRCR
Subjt:  RGASYYNCQMGAPANPYSRGCSAITRCR

A0A6J1EV64 protein RALF-like 337.1e-3158.46Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGE--EFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC
        M+ S +  FL   AI  ++   SS+ AVDF+G  + L +P ES CR   GSIAEC L G+  +  F  EFE+ S+I+RRILA++ RY+SYGA++RNSVPC
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGE--EFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC

Query:  SRRGASYYNCQMGAPANPYSRGCSAITRCR
        SRRGASYYNCQ GA ANPY RGC+AITRCR
Subjt:  SRRGASYYNCQMGAPANPYSRGCSAITRCR

A0A6J1KG89 protein RALF-like 334.2e-3158.46Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGE--EFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC
        M+ S +  FL   AI  ++   SS+  VDF+GD + L +P ES CR   GSIAEC L G+  +  F  EFE+ S+I+RRILA + RY+SYGA++RNSVPC
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGE--EFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC

Query:  SRRGASYYNCQMGAPANPYSRGCSAITRCR
        SRRGASYYNCQ GA ANPY RGC+AITRCR
Subjt:  SRRGASYYNCQMGAPANPYSRGCSAITRCR

A0A6J1KVY0 protein RALF-like 334.2e-3157.69Show/hide
Query:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGG--EEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC
        M  S +   +   A+  ++   SS+TA+DF+GD + L  P +S CR   GSI EC L G  ++  F  EFE+ S+I+RRILATT RYISYGA+RRN+VPC
Subjt:  MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGG--EEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPC

Query:  SRRGASYYNCQMGAPANPYSRGCSAITRCR
        SRRGASYYNC+ GA ANPY+RGCSAITRCR
Subjt:  SRRGASYYNCQMGAPANPYSRGCSAITRCR

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 335.1e-2657.02Show/hide
Query:  LMICAISVSYL--AFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYN
        ++I  ++V +L  A +S ++ DF        +P ES C   +G+IAEC L   E     EFE+ S+I+RRILATT +YISYGA+RRN+VPCSRRGASYYN
Subjt:  LMICAISVSYL--AFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYN

Query:  CQMGAPANPYSRGCSAITRCR
        C+ GA ANPYSRGCSAITRCR
Subjt:  CQMGAPANPYSRGCSAITRCR

Q945T0 Rapid alkalinization factor5.8e-2254.1Show/hide
Query:  LMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSG---SGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYY
        ++I A  +S  A   S A D+        +P     RSG    GSI EC +  EE     EFE+ S+ +RRILA T++YISYGA+++NSVPCSRRGASYY
Subjt:  LMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSG---SGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYY

Query:  NCQMGAPANPYSRGCSAITRCR
        NC+ GA ANPYSRGCSAITRCR
Subjt:  NCQMGAPANPYSRGCSAITRCR

Q9LUS7 Rapid alkalinization factor 231.0e-2654.48Show/hide
Query:  IHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPP-ESVCRSGSGSIAECKL------GGEEFH----FAAEFEIPSKISRRILATTRRYISYGAMRRN
        I   L+I A+  ++    SS + +F GD      PP E+ CR   G+IAEC +      GG+ F+       EFE+ S+I+RRILA TRRYISYGA+RRN
Subjt:  IHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPP-ESVCRSGSGSIAECKL------GGEEFH----FAAEFEIPSKISRRILATTRRYISYGAMRRN

Query:  SVPCSRRGASYYNCQMGAPANPYSRGCSAITRCR
        ++PCSRRGASYYNC+ GA ANPYSRGCSAITRCR
Subjt:  SVPCSRRGASYYNCQMGAPANPYSRGCSAITRCR

Q9MA62 Protein RALF-like 221.6e-2454.4Show/hide
Query:  SNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGA
        +N      + AI    ++   ST  DF     F+     S+    +GSIAEC +  EE     E E  S ISRRILA  ++YISYGAMRRNSVPCSRRGA
Subjt:  SNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGA

Query:  SYYNCQMGAPANPYSRGCSAITRCR
        SYYNCQ GA ANPYSRGCS ITRCR
Subjt:  SYYNCQMGAPANPYSRGCSAITRCR

Q9SRY3 Protein RALF-like 13.8e-2169.62Show/hide
Query:  GSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYNCQMGAPANPYSRGCSAITRCR
        GSIAEC +G E      E E+ S+I+RRILATT +YISY +++RNSVPCSRRGASYYNCQ GA ANPYSRGCS I RCR
Subjt:  GSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYNCQMGAPANPYSRGCSAITRCR

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 12.7e-2269.62Show/hide
Query:  GSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYNCQMGAPANPYSRGCSAITRCR
        GSIAEC +G E      E E+ S+I+RRILATT +YISY +++RNSVPCSRRGASYYNCQ GA ANPYSRGCS I RCR
Subjt:  GSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYNCQMGAPANPYSRGCSAITRCR

AT2G33775.1 ralf-like 193.7e-1651.81Show/hide
Query:  CRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYNCQMGAPANPYSRGCSAITRC
        C +G G I E    GE      ++ + S+ +RR LA  R YISYGA+R+N+VPCSRRG SYY+C+    ANPY RGCS IT C
Subjt:  CRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYNCQMGAPANPYSRGCSAITRC

AT3G05490.1 ralf-like 221.2e-2554.4Show/hide
Query:  SNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGA
        +N      + AI    ++   ST  DF     F+     S+    +GSIAEC +  EE     E E  S ISRRILA  ++YISYGAMRRNSVPCSRRGA
Subjt:  SNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGA

Query:  SYYNCQMGAPANPYSRGCSAITRCR
        SYYNCQ GA ANPYSRGCS ITRCR
Subjt:  SYYNCQMGAPANPYSRGCSAITRCR

AT3G16570.1 rapid alkalinization factor 237.3e-2854.48Show/hide
Query:  IHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPP-ESVCRSGSGSIAECKL------GGEEFH----FAAEFEIPSKISRRILATTRRYISYGAMRRN
        I   L+I A+  ++    SS + +F GD      PP E+ CR   G+IAEC +      GG+ F+       EFE+ S+I+RRILA TRRYISYGA+RRN
Subjt:  IHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPP-ESVCRSGSGSIAECKL------GGEEFH----FAAEFEIPSKISRRILATTRRYISYGAMRRN

Query:  SVPCSRRGASYYNCQMGAPANPYSRGCSAITRCR
        ++PCSRRGASYYNC+ GA ANPYSRGCSAITRCR
Subjt:  SVPCSRRGASYYNCQMGAPANPYSRGCSAITRCR

AT4G15800.1 ralf-like 333.6e-2757.02Show/hide
Query:  LMICAISVSYL--AFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYN
        ++I  ++V +L  A +S ++ DF        +P ES C   +G+IAEC L   E     EFE+ S+I+RRILATT +YISYGA+RRN+VPCSRRGASYYN
Subjt:  LMICAISVSYL--AFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYN

Query:  CQMGAPANPYSRGCSAITRCR
        C+ GA ANPYSRGCSAITRCR
Subjt:  CQMGAPANPYSRGCSAITRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCTCAAACATCCATGGCTTCCTCATGATCTGCGCAATCTCCGTCTCCTATCTGGCGTTCTCTTCATCCACCGCCGTCGATTTCACCGGAGACCGCCAATTCCT
CCACCTTCCGCCGGAATCTGTTTGCCGGTCAGGATCGGGATCGATCGCGGAGTGCAAGCTCGGTGGCGAGGAATTCCATTTCGCGGCGGAGTTCGAAATACCGTCGAAGA
TCAGCCGCCGCATTCTGGCGACTACGAGGCGTTACATCAGCTACGGTGCGATGCGGAGGAACTCAGTGCCGTGCTCCCGACGCGGCGCGTCGTATTACAATTGCCAGATG
GGAGCTCCGGCCAATCCATACTCTCGTGGTTGCAGCGCCATCACTAGATGTAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCTCAAACATCCATGGCTTCCTCATGATCTGCGCAATCTCCGTCTCCTATCTGGCGTTCTCTTCATCCACCGCCGTCGATTTCACCGGAGACCGCCAATTCCT
CCACCTTCCGCCGGAATCTGTTTGCCGGTCAGGATCGGGATCGATCGCGGAGTGCAAGCTCGGTGGCGAGGAATTCCATTTCGCGGCGGAGTTCGAAATACCGTCGAAGA
TCAGCCGCCGCATTCTGGCGACTACGAGGCGTTACATCAGCTACGGTGCGATGCGGAGGAACTCAGTGCCGTGCTCCCGACGCGGCGCGTCGTATTACAATTGCCAGATG
GGAGCTCCGGCCAATCCATACTCTCGTGGTTGCAGCGCCATCACTAGATGTAGGTGA
Protein sequenceShow/hide protein sequence
MQSSNIHGFLMICAISVSYLAFSSSTAVDFTGDRQFLHLPPESVCRSGSGSIAECKLGGEEFHFAAEFEIPSKISRRILATTRRYISYGAMRRNSVPCSRRGASYYNCQM
GAPANPYSRGCSAITRCR