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HG10012570 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012570
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCAP-Gly domain-containing linker protein 1-like
Genome locationChr01:22424660..22428506
RNA-Seq ExpressionHG10012570
SyntenyHG10012570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134206.1 CAP-Gly domain-containing linker protein 1 [Cucumis sativus]1.4e-4894.21Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK
        ELNESRSELLNRIQSLKQDLQNWRSKLDTQV+TYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE QHQHPV + DK
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK

Query:  EDADEAKKDGSTEEKGNEAEN
        EDADEAKKD  TEEKGNEAEN
Subjt:  EDADEAKKDGSTEEKGNEAEN

XP_008438878.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X1 [Cucumis melo]2.6e-4793.44Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG-LQDVSVDNNENQHQHPVENSD
        ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG LQDVSVD NE QHQHP  + D
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG-LQDVSVDNNENQHQHPVENSD

Query:  KEDADEAKKDGSTEEKGNEAEN
        KEDADEAKKDG TEEKGNEAEN
Subjt:  KEDADEAKKDGSTEEKGNEAEN

XP_008438879.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo]1.0e-4894.21Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK
        ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD NE QHQHP  + DK
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK

Query:  EDADEAKKDGSTEEKGNEAEN
        EDADEAKKDG TEEKGNEAEN
Subjt:  EDADEAKKDGSTEEKGNEAEN

XP_038878824.1 CAP-Gly domain-containing linker protein 1 isoform X1 [Benincasa hispida]2.1e-4995.04Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK
        ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSV++NE QHQHPVE+SDK
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK

Query:  EDADEAKKDGSTEEKGNEAEN
        EDAD+AKKDG TEEKGNEAEN
Subjt:  EDADEAKKDGSTEEKGNEAEN

XP_038878834.1 CAP-Gly domain-containing linker protein 1 isoform X2 [Benincasa hispida]5.7e-4793.39Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK
        ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG  DVSV++NE QHQHPVE+SDK
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK

Query:  EDADEAKKDGSTEEKGNEAEN
        EDAD+AKKDG TEEKGNEAEN
Subjt:  EDADEAKKDGSTEEKGNEAEN

TrEMBL top hitse value%identityAlignment
A0A1S3AXE8 CAP-Gly domain-containing linker protein 1 isoform X11.2e-4793.44Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG-LQDVSVDNNENQHQHPVENSD
        ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG LQDVSVD NE QHQHP  + D
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLG-LQDVSVDNNENQHQHPVENSD

Query:  KEDADEAKKDGSTEEKGNEAEN
        KEDADEAKKDG TEEKGNEAEN
Subjt:  KEDADEAKKDGSTEEKGNEAEN

A0A1S3AY29 CAP-Gly domain-containing linker protein 1 isoform X25.1e-4994.21Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK
        ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD NE QHQHP  + DK
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK

Query:  EDADEAKKDGSTEEKGNEAEN
        EDADEAKKDG TEEKGNEAEN
Subjt:  EDADEAKKDGSTEEKGNEAEN

A0A5D3D134 CAP-Gly domain-containing linker protein 1 isoform X25.1e-4994.21Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK
        ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD NE QHQHP  + DK
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK

Query:  EDADEAKKDGSTEEKGNEAEN
        EDADEAKKDG TEEKGNEAEN
Subjt:  EDADEAKKDGSTEEKGNEAEN

A0A6J1GVY7 CAP-Gly domain-containing linker protein 1-like8.9e-4690.24Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK
        ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE +HQHP E S+K
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK

Query:  EDADEAKKD--GSTEEKGNEAEN
        EDA EA K+  GSTEEKGNEA N
Subjt:  EDADEAKKD--GSTEEKGNEAEN

A0A6J1IY17 CAP-Gly domain-containing linker protein 18.9e-4690.24Show/hide
Query:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK
        ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNE +HQHP E S+K
Subjt:  ELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVDNNENQHQHPVENSDK

Query:  EDADEAKKD--GSTEEKGNEAEN
        EDA EA K+  GSTEEKGNEA N
Subjt:  EDADEAKKD--GSTEEKGNEAEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15790.1 unknown protein3.6e-2352.38Show/hide
Query:  VDASSLIMTRGLTEKEVASLLTEMELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRN
        +  SS   T+      V S LT  ELNESR+ELLNRIQ+LKQDLQ+WR KLDTQV  YR ELS LKK+LN+EVE LR EF++L+TTL QQQ+DV+ SL++
Subjt:  VDASSLIMTRGLTEKEVASLLTEMELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRN

Query:  LGLQDVSVDNNENQHQHPVENSDK--EDADEAKKDGSTEEKGNEAEN
        LGLQD              E  DK  E  +E  +  ST++   EAE+
Subjt:  LGLQDVSVDNNENQHQHPVENSDK--EDADEAKKDGSTEEKGNEAEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACGCATCTAGCTTAATCATGACTCGTGGATTAACGGAAAAGGAAGTTGCATCCCTTCTCACTGAAATGGAATTGAACGAATCAAGGTCAGAGCTGCTTAATAG
AATTCAATCTCTTAAGCAGGATCTCCAGAATTGGAGGTCAAAGCTAGACACGCAAGTTAATACCTACCGCAGTGAACTCTCCGAACTCAAGAAATCACTTAATGTTGAAG
TGGAGCACCTTCGCACGGAGTTCCAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGATGTGACTACTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCTGTGGAC
AATAACGAGAATCAACATCAACATCCAGTGGAAAACAGCGACAAGGAAGACGCAGACGAGGCTAAGAAGGATGGCTCAACAGAGGAAAAGGGGAATGAAGCTGAGAATTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACGCATCTAGCTTAATCATGACTCGTGGATTAACGGAAAAGGAAGTTGCATCCCTTCTCACTGAAATGGAATTGAACGAATCAAGGTCAGAGCTGCTTAATAG
AATTCAATCTCTTAAGCAGGATCTCCAGAATTGGAGGTCAAAGCTAGACACGCAAGTTAATACCTACCGCAGTGAACTCTCCGAACTCAAGAAATCACTTAATGTTGAAG
TGGAGCACCTTCGCACGGAGTTCCAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGATGTGACTACTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCTGTGGAC
AATAACGAGAATCAACATCAACATCCAGTGGAAAACAGCGACAAGGAAGACGCAGACGAGGCTAAGAAGGATGGCTCAACAGAGGAAAAGGGGAATGAAGCTGAGAATTA
A
Protein sequenceShow/hide protein sequence
MVDASSLIMTRGLTEKEVASLLTEMELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQDVSVD
NNENQHQHPVENSDKEDADEAKKDGSTEEKGNEAEN