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HG10012574 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012574
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSANT domain-containing protein
Genome locationChr01:22459214..22459501
RNA-Seq ExpressionHG10012574
SyntenyHG10012574
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049486.1 uncharacterized protein E6C27_scaffold171G007400 [Cucumis melo var. makuwa]8.1e-1056.79Show/hide
Query:  VFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCF-SDRLNLGLS-CFVPVQCPVVIRKLVT
        VFS       VLHF + AVLCGNSETK LYPVNL  +  L  F     +    F   R NLGLS CF PVQCPVVI KLVT
Subjt:  VFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCF-SDRLNLGLS-CFVPVQCPVVIRKLVT
TrEMBL top hitse value%identityAlignment
A0A5D3D0I3 SANT domain-containing protein3.9e-1056.79Show/hide
Query:  VFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCF-SDRLNLGLS-CFVPVQCPVVIRKLVT
        VFS       VLHF + AVLCGNSETK LYPVNL  +  L  F     +    F   R NLGLS CF PVQCPVVI KLVT
Subjt:  VFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCF-SDRLNLGLS-CFVPVQCPVVIRKLVT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCGTATGGTGAAGCGAGTCTCCTTCCAACTCCAGTGGCTGTCGTCTTCTCATCCTCCACATTCAAGCTGTGTGTGCTTCACTTTACATCTGCAGCAGTTCTCTG
TGGAAATTCAGAAACTAAGCCCCTTTACCCTGTGAACTTGAATTACTTGCATCTCTTAAATCATTTTTTGCTGCACAGTTCGAATCTTGGTCGATGTTTCTCTGATCGTT
TGAATCTCGGACTCTCCTGTTTTGTACCTGTACAGTGTCCAGTGGTGATAAGAAAACTTGTCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCGTATGGTGAAGCGAGTCTCCTTCCAACTCCAGTGGCTGTCGTCTTCTCATCCTCCACATTCAAGCTGTGTGTGCTTCACTTTACATCTGCAGCAGTTCTCTG
TGGAAATTCAGAAACTAAGCCCCTTTACCCTGTGAACTTGAATTACTTGCATCTCTTAAATCATTTTTTGCTGCACAGTTCGAATCTTGGTCGATGTTTCTCTGATCGTT
TGAATCTCGGACTCTCCTGTTTTGTACCTGTACAGTGTCCAGTGGTGATAAGAAAACTTGTCACATGA
Protein sequenceShow/hide protein sequence
MKPYGEASLLPTPVAVVFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCFSDRLNLGLSCFVPVQCPVVIRKLVT