; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012603 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012603
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box-like domain-containing protein
Genome locationChr01:22706276..22708977
RNA-Seq ExpressionHG10012603
SyntenyHG10012603
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
InterPro domainsIPR039588 - F-box only protein 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134187.1 uncharacterized protein LOC101218430 [Cucumis sativus]3.2e-9072.27Show/hide
Query:  MDHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPI
        +D+L IDTALKIASSLQ                                                  GWKSFYIQRHIEI GRAQAAVKF+EQCSP+TPI
Subjt:  MDHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPI

Query:  EGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVT
        EGGDYLRTIGGLWDLKLSF+DAQMVLFKPQLNELLNLVGLHYCR WLQ+PANQ+MEALQR KI ERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAEL+T
Subjt:  EGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVT

Query:  EEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST
        EEGEDVLGVLSRGAVHEVLRVQVSVGD FA HWS+QST
Subjt:  EEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST

XP_008438803.1 PREDICTED: uncharacterized protein LOC103483796 [Cucumis melo]1.3e-9173.42Show/hide
Query:  DHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIE
        DHLP DTALKIASSLQ                                                  GWKSFYIQRHIEILGRAQAAVKF+EQCSP+TPIE
Subjt:  DHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIE

Query:  GGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTE
        GGDYLRTIGGLWDLKLSF+DAQMVLFKPQLNELLNLVGLHYCR WLQVPANQ++EALQR KI ERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAEL+TE
Subjt:  GGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTE

Query:  EGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST
        EGEDVLGVLSRGAVHEVLRVQVSVGD FA HWS+QST
Subjt:  EGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST

XP_022137971.1 uncharacterized protein LOC111009254 isoform X1 [Momordica charantia]1.5e-7963.07Show/hide
Query:  HLPIDTALKIASSLQ-------------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPA
        HLPID ALKIASSLQ                                                       GW++FYI++HIEI G+A+AAVKFIEQCSP+
Subjt:  HLPIDTALKIASSLQ-------------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPA

Query:  TPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAE
        TPIE GDY R I GLWDLKLSF+D QMVLFKPQLNELLNLVGLHYC+ WLQVPANQVMEAL   KI+E+H+ VKWWKLGRWFYGFRMRDE QTRRVSLAE
Subjt:  TPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAE

Query:  LVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST
        L+  EGED+LGVLSRGAVHEVLRVQ++ GDPF SHWSQQ T
Subjt:  LVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST

XP_022950192.1 uncharacterized protein LOC111453355 [Cucurbita moschata]4.5e-7686.67Show/hide
Query:  GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERH
        GWKSFYI RHIEILGRAQAAVKFIEQC P+TPIEGGDYLRTI GL DLKLSFID QMVLFKPQLN LLNLVGLHYC   L++PA +VMEALQR KI+E+H
Subjt:  GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERH

Query:  ICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASH
        ICVKWWKLGRWFYGFRMRDEQ TRRVSLAELVT EGEDVLGVLSRG VHEVLRVQVSV DPF SH
Subjt:  ICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASH

XP_038893805.1 uncharacterized protein LOC120082593 [Benincasa hispida]8.4e-9174.36Show/hide
Query:  MDHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPI
        ++HLPIDTALKIASSLQ                                                  GWKS YIQRHIEILGRAQAAVKFIEQCSP+TPI
Subjt:  MDHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPI

Query:  EGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVT
        EGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCR WLQVPANQVMEALQR K+ ER+ICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVT
Subjt:  EGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVT

Query:  EEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWS
        EEGEDVLGVLSRGAVHEVLRVQVS GDPFASHWS
Subjt:  EEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWS

TrEMBL top hitse value%identityAlignment
A0A0A0L7T9 F-box domain-containing protein1.5e-9072.27Show/hide
Query:  MDHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPI
        +D+L IDTALKIASSLQ                                                  GWKSFYIQRHIEI GRAQAAVKF+EQCSP+TPI
Subjt:  MDHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPI

Query:  EGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVT
        EGGDYLRTIGGLWDLKLSF+DAQMVLFKPQLNELLNLVGLHYCR WLQ+PANQ+MEALQR KI ERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAEL+T
Subjt:  EGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVT

Query:  EEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST
        EEGEDVLGVLSRGAVHEVLRVQVSVGD FA HWS+QST
Subjt:  EEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST

A0A1S3AXY1 uncharacterized protein LOC1034837966.3e-9273.42Show/hide
Query:  DHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIE
        DHLP DTALKIASSLQ                                                  GWKSFYIQRHIEILGRAQAAVKF+EQCSP+TPIE
Subjt:  DHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIE

Query:  GGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTE
        GGDYLRTIGGLWDLKLSF+DAQMVLFKPQLNELLNLVGLHYCR WLQVPANQ++EALQR KI ERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAEL+TE
Subjt:  GGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTE

Query:  EGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST
        EGEDVLGVLSRGAVHEVLRVQVSVGD FA HWS+QST
Subjt:  EGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST

A0A5A7U795 F-box-like domain-containing protein6.3e-9273.42Show/hide
Query:  DHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIE
        DHLP DTALKIASSLQ                                                  GWKSFYIQRHIEILGRAQAAVKF+EQCSP+TPIE
Subjt:  DHLPIDTALKIASSLQ--------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIE

Query:  GGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTE
        GGDYLRTIGGLWDLKLSF+DAQMVLFKPQLNELLNLVGLHYCR WLQVPANQ++EALQR KI ERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAEL+TE
Subjt:  GGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTE

Query:  EGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST
        EGEDVLGVLSRGAVHEVLRVQVSVGD FA HWS+QST
Subjt:  EGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST

A0A6J1C8B1 uncharacterized protein LOC111009254 isoform X17.2e-8063.07Show/hide
Query:  HLPIDTALKIASSLQ-------------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPA
        HLPID ALKIASSLQ                                                       GW++FYI++HIEI G+A+AAVKFIEQCSP+
Subjt:  HLPIDTALKIASSLQ-------------------------------------------------------GWKSFYIQRHIEILGRAQAAVKFIEQCSPA

Query:  TPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAE
        TPIE GDY R I GLWDLKLSF+D QMVLFKPQLNELLNLVGLHYC+ WLQVPANQVMEAL   KI+E+H+ VKWWKLGRWFYGFRMRDE QTRRVSLAE
Subjt:  TPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAE

Query:  LVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST
        L+  EGED+LGVLSRGAVHEVLRVQ++ GDPF SHWSQQ T
Subjt:  LVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST

A0A6J1GE44 uncharacterized protein LOC1114533552.2e-7686.67Show/hide
Query:  GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERH
        GWKSFYI RHIEILGRAQAAVKFIEQC P+TPIEGGDYLRTI GL DLKLSFID QMVLFKPQLN LLNLVGLHYC   L++PA +VMEALQR KI+E+H
Subjt:  GWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERH

Query:  ICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASH
        ICVKWWKLGRWFYGFRMRDEQ TRRVSLAELVT EGEDVLGVLSRG VHEVLRVQVSV DPF SH
Subjt:  ICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15563.1 unknown protein5.7e-2941.45Show/hide
Query:  RHIEILGRAQAAVKFIEQCSPATPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKL
        +H E+  RA   +K++ +      +E G YL  +  +  ++  F D ++  FKP L+ LLNL+GL YC   L+    QV++ L++  I+E+ + VKW  L
Subjt:  RHIEILGRAQAAVKFIEQCSPATPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEALQRSKITERHICVKWWKL

Query:  GRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSVGD
        GRW  G RMRD+  +R+VSL ++VT + E VL VL RG VHEVLRV +S  D
Subjt:  GRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSVGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGATGGACCATCTTCCCATTGACACTGCACTGAAAATTGCTTCTTCCCTTCAGGGATGGAAAAGCTTTTACATTCAGAGACATATTGAGATATTGGGAAGAGCCCA
AGCAGCGGTAAAGTTTATAGAACAATGCTCTCCCGCTACCCCAATTGAGGGCGGAGACTATCTCAGGACAATTGGTGGCTTGTGGGATTTGAAGCTCAGTTTTATAGATG
CTCAGATGGTGCTTTTCAAACCTCAACTTAATGAGCTACTGAACTTGGTTGGCTTACACTACTGTAGAACTTGGCTTCAAGTCCCTGCCAATCAAGTCATGGAAGCACTC
CAAAGATCCAAGATAACAGAGAGGCATATATGTGTGAAATGGTGGAAGCTAGGAAGATGGTTTTATGGATTCCGCATGAGAGACGAACAACAAACTCGTCGAGTCTCTCT
GGCAGAACTCGTGACGGAAGAAGGGGAGGATGTTCTTGGGGTGCTCAGCCGAGGTGCCGTTCACGAGGTGCTTCGAGTTCAGGTTTCTGTAGGTGATCCCTTTGCCAGTC
ACTGGTCTCAGCAAAGCACATAA
mRNA sequenceShow/hide mRNA sequence
ATTGAGATGGACCATCTTCCCATTGACACTGCACTGAAAATTGCTTCTTCCCTTCAGGGATGGAAAAGCTTTTACATTCAGAGACATATTGAGATATTGGGAAGAGCCCA
AGCAGCGGTAAAGTTTATAGAACAATGCTCTCCCGCTACCCCAATTGAGGGCGGAGACTATCTCAGGACAATTGGTGGCTTGTGGGATTTGAAGCTCAGTTTTATAGATG
CTCAGATGGTGCTTTTCAAACCTCAACTTAATGAGCTACTGAACTTGGTTGGCTTACACTACTGTAGAACTTGGCTTCAAGTCCCTGCCAATCAAGTCATGGAAGCACTC
CAAAGATCCAAGATAACAGAGAGGCATATATGTGTGAAATGGTGGAAGCTAGGAAGATGGTTTTATGGATTCCGCATGAGAGACGAACAACAAACTCGTCGAGTCTCTCT
GGCAGAACTCGTGACGGAAGAAGGGGAGGATGTTCTTGGGGTGCTCAGCCGAGGTGCCGTTCACGAGGTGCTTCGAGTTCAGGTTTCTGTAGGTGATCCCTTTGCCAGTC
ACTGGTCTCAGCAAAGCACATAA
Protein sequenceShow/hide protein sequence
IEMDHLPIDTALKIASSLQGWKSFYIQRHIEILGRAQAAVKFIEQCSPATPIEGGDYLRTIGGLWDLKLSFIDAQMVLFKPQLNELLNLVGLHYCRTWLQVPANQVMEAL
QRSKITERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSVGDPFASHWSQQST