CuGenDBv2

Gene ID	HG10012687
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	preprotein translocase subunit SECE1
Genome location	Chr01:23412802..23413341
RNA-Seq Expression	HG10012687
Synteny	HG10012687
Gene Ontology terms	GO:0009306 - protein secretion (biological process) GO:0071806 - protein transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domains	IPR038379 - SecE superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0049363.1 preprotein translocase subunit SECE1 [Cucumis melo var. makuwa]

5.9e-78

93.33

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Query:  MAVPISLKFPAVSSTLTNRAASLFVS-LRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLG
        MAVPI LKFP V STLTNR ASLFV  LRRSS HHSH HSQHTIRL TIRS RNIKFSAVNAVQESQENTESDGVEVQAGPPT EPKTADQSAESGANLG
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVS-LRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLG

Query:  AEIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        AEIQ ALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  AEIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

XP_004134136.1 preprotein translocase subunit SECE1 [Cucumis sativus]

7.0e-79

92.74

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Query:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA
        MAVPISLKFP V STLTNR ASLFV LRRSS HHSH HSQHTIR  TIRS RN+KFSAVNAVQESQENTESDGVEVQAGPPT EPKTADQSAESGANLGA
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA

Query:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQ ALKQ+KVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

XP_008438678.1 PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]

3.5e-78

93.33

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Query:  MAVPISLKFPAVSSTLTNRAASLFVS-LRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLG
        MAVPISLKFP V STLTNR ASLFV  LR+SS HHSH HSQHTIRL TIRS RNIKFSAVNAVQESQENTESDGVEVQAGPPT EPKTADQSAESGANLG
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVS-LRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLG

Query:  AEIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        AEIQ ALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  AEIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

XP_022979428.1 preprotein translocase subunit SECE1 [Cucurbita maxima]

6.7e-74

88.83

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Query:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA
        MAVPISL+FPAV STLT+RAASLFVSLRRSS+H SH HS  TIRL  +RS+RN KFSAVNAVQESQENTESDGVEVQAGPPT E KTADQ AESG NLGA
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA

Query:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQ ALKQRKVEKEGDLIGGVAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

XP_038896581.1 preprotein translocase subunit SECE1 [Benincasa hispida]

1.7e-77

92.18

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Query:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA
        MAVPISLKFP V STLTNR+ASLF+SLRRSSAHHSH HSQHTIRL TIR  R I FSAVNAVQESQENTES+GVEVQAGPPT EPKTADQSAESGANLGA
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA

Query:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQ ALKQRKVEKEGDLIGGVAEEIKEIEWPAF+KVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5J0 Uncharacterized protein

3.4e-79

92.74

Show/hide

Query:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA
        MAVPISLKFP V STLTNR ASLFV LRRSS HHSH HSQHTIR  TIRS RN+KFSAVNAVQESQENTESDGVEVQAGPPT EPKTADQSAESGANLGA
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA

Query:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQ ALKQ+KVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

A0A1S3AWM4 preprotein translocase subunit SECE1

1.7e-78

93.33

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Query:  MAVPISLKFPAVSSTLTNRAASLFVS-LRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLG
        MAVPISLKFP V STLTNR ASLFV  LR+SS HHSH HSQHTIRL TIRS RNIKFSAVNAVQESQENTESDGVEVQAGPPT EPKTADQSAESGANLG
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVS-LRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLG

Query:  AEIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        AEIQ ALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  AEIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

A0A5D3D089 Preprotein translocase subunit SECE1

2.9e-78

93.33

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Query:  MAVPISLKFPAVSSTLTNRAASLFVS-LRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLG
        MAVPI LKFP V STLTNR ASLFV  LRRSS HHSH HSQHTIRL TIRS RNIKFSAVNAVQESQENTESDGVEVQAGPPT EPKTADQSAESGANLG
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVS-LRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLG

Query:  AEIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        AEIQ ALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  AEIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

A0A6J1GWU8 preprotein translocase subunit SECE1

1.8e-72

87.71

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Query:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA
        MAVPISL+FP V ST TNRAASLFVSLRRSSA+HSH H   TIRL  IRS+RN  FSAVNAVQESQENTESDGVEVQAGPP  E KTADQ AESG NLGA
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA

Query:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQ ALKQRKVEKEGDLIGGVAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

A0A6J1IW64 preprotein translocase subunit SECE1

3.3e-74

88.83

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Query:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA
        MAVPISL+FPAV STLT+RAASLFVSLRRSS+H SH HS  TIRL  +RS+RN KFSAVNAVQESQENTESDGVEVQAGPPT E KTADQ AESG NLGA
Subjt:  MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGA

Query:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQ ALKQRKVEKEGDLIGGVAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQGALKQRKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

SwissProt top hits

e value

%identity

Alignment

O23342 Preprotein translocase subunit SECE1

8.4e-27

50.35

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Query:  IRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGAEIQGALKQRKVEKE----GDLIGGVAEEIKEIEWPAFRKVLG
        IR  T  + R        A+++ ++   S+        P  E  + +      + +GAEI+ A++QRK  +E     + + GVAEE+KEIEWPAF+KVLG
Subjt:  IRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGAEIQGALKQRKVEKE----GDLIGGVAEEIKEIEWPAFRKVLG

Query:  TTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        TTGVV+GVIAGSSVVLLTVN LLAELSDRVF G+GVQDFFS
Subjt:  TTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

Arabidopsis top hits

e value

%identity

Alignment

AT4G14870.1 secE/sec61-gamma protein transport protein

6.0e-28

50.35

Show/hide

Query:  IRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGAEIQGALKQRKVEKE----GDLIGGVAEEIKEIEWPAFRKVLG
        IR  T  + R        A+++ ++   S+        P  E  + +      + +GAEI+ A++QRK  +E     + + GVAEE+KEIEWPAF+KVLG
Subjt:  IRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGAEIQGALKQRKVEKE----GDLIGGVAEEIKEIEWPAFRKVLG

Query:  TTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        TTGVV+GVIAGSSVVLLTVN LLAELSDRVF G+GVQDFFS
Subjt:  TTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

Sequences

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CDS sequence

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ATGGCCGTTCCGATCTCCCTGAAATTTCCGGCGGTATCATCCACTTTAACCAATAGAGCCGCCTCCTTGTTCGTATCACTACGGCGAAGCTCCGCTCATCATTCTCATAC
TCACTCGCAGCACACGATCAGACTCTCGACGATTAGGTCCAAAAGGAACATTAAGTTCTCTGCCGTCAATGCCGTGCAGGAAAGCCAAGAGAACACAGAATCCGACGGGG
TGGAGGTTCAAGCAGGACCACCGACGGTGGAGCCGAAAACGGCCGACCAATCGGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGGGGCTTTGAAGCAACGGAAG
GTGGAGAAAGAAGGGGACCTGATCGGTGGAGTGGCGGAGGAGATAAAGGAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTAT
TGCTGGCTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTATTGGCGGAGCTGTCCGACCGAGTTTTCGCCGGGAAAGGAGTTCAGGATTTCTTTAGCTGA

mRNA sequence

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Protein sequence

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MAVPISLKFPAVSSTLTNRAASLFVSLRRSSAHHSHTHSQHTIRLSTIRSKRNIKFSAVNAVQESQENTESDGVEVQAGPPTVEPKTADQSAESGANLGAEIQGALKQRK
VEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

HG10012687 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome