; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012743 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012743
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationChr01:23945248..23945820
RNA-Seq ExpressionHG10012743
SyntenyHG10012743
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134101.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]6.9e-10196.32Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSL+SIGKG+VKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_008438585.1 PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Cucumis melo]6.9e-10196.84Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_022924760.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita moschata]8.1e-9491.67Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGKG VKN  ESQCVSFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_038877102.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Benincasa hispida]1.6e-9795.21Show/hide
Query:  YEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRGLL
        Y VELV+DVEIT EKEKRDA NFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVV ++SQCVSFPITFSCRTFLPFEGEILHGVV HIFRRGLL
Subjt:  YEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRGLL

Query:  LKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LKCGPIKYVFLSA KMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_038877103.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]2.2e-9995.79Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELV+DVEIT EKEKRDA NFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVV ++SQCVSFPITFSCRTFLPFEGEILHGVV HIFRRG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSA KMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A3 Uncharacterized protein3.3e-10196.32Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSL+SIGKG+VKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like3.3e-10196.84Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like3.3e-10196.84Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like3.9e-9491.67Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGKG VKN  ESQCVSFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X19.7e-9390.62Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MF EVELVR+VE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGK  VKN  ESQCVSFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 71.2e-3441.99Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  +V I  E         +R I+  LLE    +KA K+ GY++AVT+L  IG+G ++  +  V FP+ FS  TF  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F + + + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS

P38421 DNA-directed RNA polymerase II subunit 71.9e-1325.81Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF+ + L R++++     +    N +  +++ L+++ ++   +  HG+ +A+T + +IGKG++++ +  V+FP+ + C  F PF+GEIL  VV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR
           + GP++ +F+S   +P    +  G+ P +++++ +  I  +  VR  ++G R
Subjt:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR

P46279 DNA-directed RNA polymerase II subunit RPB73.9e-1428.48Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKE---KANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIF
        MF+ + L R++++           F R +   L+  L+K+     +  HG+ +AVT +++IGKG++++ +  V+FP+ + C  F PF+GEIL  VV  + 
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKE---KANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR
        + G   + GP++ +F+S   +P    +  G+ P +++++ +  I  D  VR  ++G R
Subjt:  RRGLLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein5.6e-3741.21Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

Q8LE42 DNA-directed RNA polymerase IV subunit 76.6e-3041.34Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  DV I  E +       QR I+  LLE   KEKA KD GY +  T L++IG+G +K ++  + FP+ F+   F  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain4.7e-3141.34Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  DV I  E +       QR I+  LLE   KEKA KD GY +  T L++IG+G +K ++  + FP+ F+   F  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

AT4G14520.1 DNA-directed RNA polymerase II-related4.0e-3841.21Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14520.2 DNA-directed RNA polymerase II-related4.0e-3841.21Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14520.3 DNA-directed RNA polymerase II-related4.0e-3841.21Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain8.3e-3641.99Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  +V I  E         +R I+  LLE    +KA K+ GY++AVT+L  IG+G ++  +  V FP+ FS  TF  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F + + + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTATGAAGTGGAACTGGTGAGAGATGTGGAAATCACGGTGGAAAAGGAAAAGAGAGATGCTCACAACTTTCAGAGGTACATTATAACATGTCTATTAGAAAACTT
ATTGAAGGAGAAGGCCAACAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGTGGTTAAGAATGAGTCTCAATGTGTTTCATTCCCCA
TTACCTTTAGTTGCCGAACCTTTTTGCCTTTCGAGGGGGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTAC
GTATTTCTTTCAGCTCGGAAAATGCCAACCTACCATTATGTTGGTGGTGAAAATCCTGTATTCTCAAGCAACGAATTTGCAACGATTGGAAACGATGTCGTTGTACGGTT
CAGTGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAAGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCTG
ACTCCGATGAGTTTGACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTATGAAGTGGAACTGGTGAGAGATGTGGAAATCACGGTGGAAAAGGAAAAGAGAGATGCTCACAACTTTCAGAGGTACATTATAACATGTCTATTAGAAAACTT
ATTGAAGGAGAAGGCCAACAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGTGGTTAAGAATGAGTCTCAATGTGTTTCATTCCCCA
TTACCTTTAGTTGCCGAACCTTTTTGCCTTTCGAGGGGGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTAC
GTATTTCTTTCAGCTCGGAAAATGCCAACCTACCATTATGTTGGTGGTGAAAATCCTGTATTCTCAAGCAACGAATTTGCAACGATTGGAAACGATGTCGTTGTACGGTT
CAGTGTGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAAGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCTG
ACTCCGATGAGTTTGACTTGTAA
Protein sequenceShow/hide protein sequence
MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRGLLLKCGPIKY
VFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL