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HG10012773 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012773
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAT-hook motif nuclear-localized protein 20-like
Genome locationChr01:24167538..24167843
RNA-Seq ExpressionHG10012773
SyntenyHG10012773
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049279.1 hypothetical protein E6C27_scaffold171G005190 [Cucumis melo var. makuwa]1.5e-3076.24Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        M+DAERK    T   APTRLQSQAPASIEIKR  +WNV IPLLS LVSPSSCGNSG E+ L MA+N AREE KGL FTK QHPAAPFYYEPVPRA  FVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

KAE8650334.1 hypothetical protein Csa_009641 [Cucumis sativus]7.3e-3379.21Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        M+DAERK++      APTRLQSQAPASIEIKRA NWNVAIPLLS LVSPSSCGNS  E+ L MAEN AREE KGL FTK QHPAAPFYYEPVPRA PFVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

KAG6582368.1 AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia]4.6e-1962.38Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        MA +ER+++       PTRLQSQAPASI I RA NWNVAIPLL+ LVS S CGNS Q + LLM ENKAREE      TK QHPA P Y  P+P  TPFVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

XP_022924297.1 AT-hook motif nuclear-localized protein 20-like [Cucurbita moschata]3.0e-1864.84Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP
        MA +ER+++       PTRLQSQAPASI I RA NWNVAIPLL+ LVS S CGNS Q + LLM ENKAREE KGL  TK QHPA PF   P
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP

XP_023526926.1 AT-hook motif nuclear-localized protein 20-like [Cucurbita pepo subsp. pepo]3.0e-1864.84Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP
        MA +ER+++       PTRLQSQAPASI I RA NWNVAIPLL+ LVS S CGNS Q + LL AENKAREE KGL  TK QHPA PF   P
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP

TrEMBL top hitse value%identityAlignment
A0A0A0L8D3 Uncharacterized protein3.5e-3379.21Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        M+DAERK++      APTRLQSQAPASIEIKRA NWNVAIPLLS LVSPSSCGNS  E+ L MAEN AREE KGL FTK QHPAAPFYYEPVPRA PFVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

A0A2P5FLQ7 Uncharacterized protein3.7e-1448.57Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAR----EEAKGLAFTKGQHPAAPFYYEPVPRAT
        MAD  R +S    R+ P+RLQ +APAS++I+   +WNVAIPLLS L SPSS   +    A + +    R    E  K + F K QHPAAPF YEP P   
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAR----EEAKGLAFTKGQHPAAPFYYEPVPRAT

Query:  PFVPV
        PFVPV
Subjt:  PFVPV

A0A5D3D1A6 Uncharacterized protein7.3e-3176.24Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        M+DAERK    T   APTRLQSQAPASIEIKR  +WNV IPLLS LVSPSSCGNSG E+ L MA+N AREE KGL FTK QHPAAPFYYEPVPRA  FVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

A0A6J1CRZ0 uncharacterized protein At4g14450, chloroplastic-like7.1e-1856.19Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEA----KGLAFTKGQHPAAPFYYEPVPRAT
        M DAER+ +  +  Q  TRLQ +AP+SI+I R  +WNVAIPLLS LVSP       ++  +LM ENKAREEA    K   FT+ +HPAAPFYY PV R T
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEA----KGLAFTKGQHPAAPFYYEPVPRAT

Query:  PFVPV
        PFVPV
Subjt:  PFVPV

A0A6J1E8H9 AT-hook motif nuclear-localized protein 20-like1.4e-1864.84Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP
        MA +ER+++       PTRLQSQAPASI I RA NWNVAIPLL+ LVS S CGNS Q + LLM ENKAREE KGL  TK QHPA PF   P
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic1.8e-0539Show/hide
Query:  SSAVTQRQAPTRLQSQAPA-SIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKA-----REEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV
        SSA +  +  ++LQ +AP+  I+     NWNVAIPLLS L    S  +S  +  +   +NK       E  K   F K QHPA+PF YEP     PF+ V
Subjt:  SSAVTQRQAPTRLQSQAPA-SIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKA-----REEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein2.5e-0739.22Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQ-NWNVAIPLLSLLVSPSSCGNSGQEEALLMAENK--AREEAKGLAFTKGQHPAAPFYYEPVPRAT-
        M+   R  S    R++ +RLQ +AP  ++I   + NW VAIPLLS   SP       +  A++  E +   +E  K   F K QHPAAPFYY+P P +  
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQ-NWNVAIPLLSLLVSPSSCGNSGQEEALLMAENK--AREEAKGLAFTKGQHPAAPFYYEPVPRAT-

Query:  PF
        PF
Subjt:  PF

AT3G23170.1 unknown protein2.5e-0742.39Show/hide
Query:  RQAPTRLQSQAPASIEI---KRAQNWNVAIPLLS-LLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV
        R+ P+RL  + PA   +     A NWN AIPLLS L +SP S  +   +  +   ++ A    K   F K QHPAAPFYYE      PFVPV
Subjt:  RQAPTRLQSQAPASIEI---KRAQNWNVAIPLLS-LLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV

AT4G14450.1 unknown protein1.2e-0639Show/hide
Query:  SSAVTQRQAPTRLQSQAPA-SIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKA-----REEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV
        SSA +  +  ++LQ +AP+  I+     NWNVAIPLLS L    S  +S  +  +   +NK       E  K   F K QHPA+PF YEP     PF+ V
Subjt:  SSAVTQRQAPTRLQSQAPA-SIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKA-----REEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATGCAGAGAGAAAAAGCAGCGCCGTTACCCAGAGGCAAGCGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCAGAATTGGAA
CGTGGCTATACCGTTGTTATCCCTTCTTGTGTCACCTTCGTCTTGTGGGAATTCAGGGCAAGAAGAAGCGTTGTTGATGGCTGAGAATAAGGCGAGGGAGGAAGCCAAAG
GGCTAGCCTTTACCAAAGGGCAGCACCCTGCGGCTCCATTTTATTATGAGCCAGTCCCAAGGGCCACACCCTTTGTGCCCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATGCAGAGAGAAAAAGCAGCGCCGTTACCCAGAGGCAAGCGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCAGAATTGGAA
CGTGGCTATACCGTTGTTATCCCTTCTTGTGTCACCTTCGTCTTGTGGGAATTCAGGGCAAGAAGAAGCGTTGTTGATGGCTGAGAATAAGGCGAGGGAGGAAGCCAAAG
GGCTAGCCTTTACCAAAGGGCAGCACCCTGCGGCTCCATTTTATTATGAGCCAGTCCCAAGGGCCACACCCTTTGTGCCCGTGTGA
Protein sequenceShow/hide protein sequence
MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSLLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV