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HG10012854 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012854
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLate embryogenesis abundant protein family protein
Genome locationChr01:24756954..24757442
RNA-Seq ExpressionHG10012854
SyntenyHG10012854
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_009102532.1 late embryogenesis abundant protein 1 [Brassica rapa]3.9e-1356.67Show/hide
Query:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQ           A+E A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

XP_013597327.1 PREDICTED: late embryogenesis abundant protein 1-like [Brassica oleracea var. oleracea]3.9e-1356.67Show/hide
Query:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQ           A+E A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

XP_018432834.1 PREDICTED: late embryogenesis abundant protein 1-like [Raphanus sativus]3.9e-1356.67Show/hide
Query:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQ           A+E A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

XP_022157950.1 late embryogenesis abundant protein 1 [Momordica charantia]2.7e-1463.22Show/hide
Query:  MSSMQQSFKAGQSQGQAE-----------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNN
        MSSMQQS KAGQS G+ +           E AN A DKA++A QSAKESA+E   ETS FLQQTGEQM++MAQGAVDT+K+TLGMN+
Subjt:  MSSMQQSFKAGQSQGQAE-----------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNN

XP_022761185.1 late embryogenesis abundant protein 1 isoform X2 [Durio zibethinus]2.5e-1258.24Show/hide
Query:  MSSMQQSFKAGQSQGQAE-----------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEKK
        MS++QQSF AGQ+QGQ +           + AN A D+A+NA QSA+ESA + +Q+T+ FLQQTGEQM  MAQGAV++VKNTLGMN  EKK
Subjt:  MSSMQQSFKAGQSQGQAE-----------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEKK

TrEMBL top hitse value%identityAlignment
A0A0D3D549 Uncharacterized protein1.9e-1356.67Show/hide
Query:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQ           A+E A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

A0A397YQV0 Uncharacterized protein1.9e-1356.67Show/hide
Query:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQ           A+E A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

A0A3P6ERB9 Uncharacterized protein1.9e-1356.67Show/hide
Query:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQ           A+E A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

A0A6J1DUG1 late embryogenesis abundant protein 11.3e-1463.22Show/hide
Query:  MSSMQQSFKAGQSQGQAE-----------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNN
        MSSMQQS KAGQS G+ +           E AN A DKA++A QSAKESA+E   ETS FLQQTGEQM++MAQGAVDT+K+TLGMN+
Subjt:  MSSMQQSFKAGQSQGQAE-----------EAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNN

M4DEV0 Uncharacterized protein1.9e-1356.67Show/hide
Query:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        MS++QQS+ AGQ++GQ           A+E A+ ACDK +NAAQS KESA   +Q+ S F+QQTGE + NMAQGAVD VKNTLGMN  +K
Subjt:  MSSMQQSFKAGQSQGQ-----------AEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 16.3e-0644Show/hide
Query:  QQSFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        QQ+ +A  ++ +A++   +A +K S   QS KE+A   K  ++ FLQQTGE++  MAQGA D VK T GM N +K
Subjt:  QQSFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

O49817 Late embryogenesis abundant protein 21.8e-0542.67Show/hide
Query:  QQSFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        QQ+ +A  ++ +A++   +A +K S   QS KE+A   K  ++ FLQQTGE+   MAQGA D VK T GM N ++
Subjt:  QQSFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

P13934 Late embryogenesis abundant protein 763.1e-0546.88Show/hide
Query:  QAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        +A++AA    + A NAAQ  KE+A   K +T  FL QTGE +  MA GA D VK+T GM   E+
Subjt:  QAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

Q94JF2 Late embryogenesis abundant protein 145.9e-0445.83Show/hide
Query:  AGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEKKN
        AGQ+     + A  A  KA+ AAQ AKE+A   K +T   LQQ GEQ+ ++A GA D V  TLGM+   K N
Subjt:  AGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEKKN

Q9LW12 Late embryogenesis abundant protein 294.5e-0442.42Show/hide
Query:  QGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        + +A++AA    + A  AAQ  KE+A   + +T  FL QTGE +  MA GA D VK+T GM   E+
Subjt:  QGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

Arabidopsis top hitse value%identityAlignment
AT3G02480.1 Late embryogenesis abundant protein (LEA) family protein1.7e-0647.89Show/hide
Query:  SFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNS
        S++AGQ+ GQ +E A    DKA +AA SA++S           LQQTG+QM   AQGA D VK+  GMN S
Subjt:  SFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNS

AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein3.2e-0542.42Show/hide
Query:  QGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK
        + +A++AA    + A  AAQ  KE+A   + +T  FL QTGE +  MA GA D VK+T GM   E+
Subjt:  QGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEK

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein7.6e-0737.61Show/hide
Query:  QQSFKAGQSQGQAEE-----------AANKACDKASNAAQSAKESAHEIKQ----------------------ETSNFLQQTGEQMMNMAQGAVDTVKNT
        QQ F AGQ++GQA+E            A  ACDK ++  QSA++ A ++ Q                      + +    QTGE + NMAQGA+D VKN+
Subjt:  QQSFKAGQSQGQAEE-----------AANKACDKASNAAQSAKESAHEIKQ----------------------ETSNFLQQTGEQMMNMAQGAVDTVKNT

Query:  LGMNNSEKK
        LGMN  EKK
Subjt:  LGMNNSEKK

AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein1.4e-0851.95Show/hide
Query:  MSSMQQ--SFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMN
        MSS  Q  SF+AGQ++GQ +E A+   DKASNAAQSAKES           L++TG+Q+   AQGA ++VKN  GMN
Subjt:  MSSMQQ--SFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMN

AT5G53820.1 Late embryogenesis abundant protein (LEA) family protein1.3e-0644.59Show/hide
Query:  SSMQQSFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMN
        +S   SF AGQ++GQ +E A+   DKASNAAQSAKES           +Q+ G+Q+   AQGA +T+K   G++
Subjt:  SSMQQSFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCATGCAACAATCCTTCAAGGCAGGCCAATCCCAAGGCCAAGCAGAGGAAGCAGCAAACAAGGCATGTGACAAGGCATCCAATGCTGCGCAATCTGCTAAGGA
GTCTGCCCACGAAATCAAGCAAGAAACTTCCAATTTTCTCCAACAGACTGGAGAGCAAATGATGAATATGGCTCAAGGTGCAGTGGATACCGTTAAGAATACACTCGGAA
TGAATAACAGTGAAAAGAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGCATGCAACAATCCTTCAAGGCAGGCCAATCCCAAGGCCAAGCAGAGGAAGCAGCAAACAAGGCATGTGACAAGGCATCCAATGCTGCGCAATCTGCTAAGGA
GTCTGCCCACGAAATCAAGCAAGAAACTTCCAATTTTCTCCAACAGACTGGAGAGCAAATGATGAATATGGCTCAAGGTGCAGTGGATACCGTTAAGAATACACTCGGAA
TGAATAACAGTGAAAAGAAGAATTGA
Protein sequenceShow/hide protein sequence
MSSMQQSFKAGQSQGQAEEAANKACDKASNAAQSAKESAHEIKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNSEKKN