; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012874 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012874
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr01:24905468..24905896
RNA-Seq ExpressionHG10012874
SyntenyHG10012874
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018836.1 Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-7394.37Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL+SILMLI FPFFTVF+SLLP EQLYGIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPV+TNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSALRKC+WLV+EDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]1.3e-7597.89Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]3.1e-7497.2Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_016898907.1 PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo]3.1e-7497.2Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]9.8e-7698.59Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKILISILMLIFFPFF+VFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hitse value%identityAlignment
A0A0A0L6V3 S-protein homolog7.8e-6397.46Show/hide
Query:  EQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVME
        EQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVME
Subjt:  EQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVME

Query:  DGFYFSDDEVNWKKDFSW
        DGFYFSDDEVNWKKDFSW
Subjt:  DGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog1.5e-7497.2Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog1.5e-7497.2Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog6.2e-7697.89Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1GCS3 S-protein homolog1.4e-7294.37Show/hide
Query:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKILISILMLIFFPFFTVF+SLLP + LYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSW VKTNFWITTTSQFSCTVKLDRTR+SF
Subjt:  MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  DAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family1.2e-0733.68Show/hide
Query:  VRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG
        V +IN  T N    LV+ C +K  D+G  AL+  +   +  + N   TTT  ++CT       K+FD F+V RD      C   R+C W + E G
Subjt:  VRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family1.0e-3853.9Show/hide
Query:  ILISILMLIFFPFFTVFVSLL-PAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFD
        I++ + MLI      +F  +L P     G E++VRVIN F +NSSLPLVIWC S   D+GGRALQE DDF W  K + W +  ++++CT+K D  RK F+
Subjt:  ILISILMLIFFPFFTVFVSLL-PAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFD

Query:  AFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
        AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Subjt:  AFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW

AT4G16195.1 Plant self-incompatibility protein S1 family1.6e-0428.43Show/hide
Query:  SSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDI---YRCSALRKCSWLVMEDG-FYFSDDEVNWKKDF
        + L L+  C SKD D+G R LQ  + +S+     F+  T   + C+        SFD +K  RD     +C + R C W +  +G   F+D+   +   +
Subjt:  SSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDI---YRCSALRKCSWLVMEDG-FYFSDDEVNWKKDF

Query:  SW
         W
Subjt:  SW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTCTCATTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTTGTGTCATTGTTACCTGCAGAGCAACTGTATGGCATAGAATACGAAGTGCGTGT
GATCAATGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCCAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCATGATGATTTCAGTTGGC
CCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTAT
CGCTGTAGTGCTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGACGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTCTCATTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTTGTGTCATTGTTACCTGCAGAGCAACTGTATGGCATAGAATACGAAGTGCGTGT
GATCAATGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCCAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCATGATGATTTCAGTTGGC
CCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTAT
CGCTGTAGTGCTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGACGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA
Protein sequenceShow/hide protein sequence
MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIY
RCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW