CuGenDBv2

Gene ID	HG10012888
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DNA repair protein REV1
Genome location	Chr01:25045434..25045628
RNA-Seq Expression	HG10012888
Synteny	HG10012888
Gene Ontology terms	GO:0042276 - error-prone translesion synthesis (biological process) GO:0070987 - error-free translesion synthesis (biological process) GO:0005634 - nucleus (cellular component) GO:0003684 - damaged DNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0017125 - deoxycytidyl transferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0043485.1 DNA repair protein REV1 isoform X1 [Cucumis melo var. makuwa]

1.3e-16

79.69

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS MNL+ NADAE+NEKSSDDLEA  LKDT+ISDVDVS EYKP   ESFEMLP+KDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

XP_016898826.1 PREDICTED: DNA repair protein REV1 isoform X1 [Cucumis melo]

1.3e-16

79.69

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS MNL+ NADAE+NEKSSDDLEA  LKDT+ISDVDVS EYKP   ESFEMLP+KDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

XP_016898828.1 PREDICTED: DNA repair protein REV1 isoform X2 [Cucumis melo]

1.3e-16

79.69

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS MNL+ NADAE+NEKSSDDLEA  LKDT+ISDVDVS EYKP   ESFEMLP+KDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

XP_016898829.1 PREDICTED: DNA repair protein REV1 isoform X3 [Cucumis melo]

1.3e-16

79.69

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS MNL+ NADAE+NEKSSDDLEA  LKDT+ISDVDVS EYKP   ESFEMLP+KDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

XP_038888412.1 DNA repair protein REV1 [Benincasa hispida]

5.8e-20

87.5

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS+MNL+DNADAELNEKSSDDLEAT LKDTNISDVD S EYKPQV ESFEM PRKDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DS62 DNA repair protein REV1

6.5e-17

79.69

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS MNL+ NADAE+NEKSSDDLEA  LKDT+ISDVDVS EYKP   ESFEMLP+KDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

A0A1S4DS66 DNA repair protein REV1

6.5e-17

79.69

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS MNL+ NADAE+NEKSSDDLEA  LKDT+ISDVDVS EYKP   ESFEMLP+KDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

A0A1S4DS83 DNA repair protein REV1

6.5e-17

79.69

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS MNL+ NADAE+NEKSSDDLEA  LKDT+ISDVDVS EYKP   ESFEMLP+KDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

A0A5A7TPZ8 DNA repair protein REV1

6.5e-17

79.69

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS MNL+ NADAE+NEKSSDDLEA  LKDT+ISDVDVS EYKP   ESFEMLP+KDADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

A0A6J1I4X1 DNA repair protein REV1

3.2e-16

76.56

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Query:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV
        MHSDS+MNL+DNAD ELNEK SDDL+A  LKDT+ISDVD S EY PQ+ ESFEMLPRK+ADV V
Subjt:  MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCATTCTGACTCTAAAATGAATCTTCGAGATAATGCAGATGCTGAACTGAATGAGAAGTCAAGTGATGATTTAGAGGCTACCAATCTAAAGGATACAAATATATCCGA
TGTAGATGTATCTACTGAATATAAACCACAAGTTTTTGAAAGTTTTGAGATGCTTCCTCGAAAGGATGCTGATGTAGGAGTATAG

mRNA sequence

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ATGCATTCTGACTCTAAAATGAATCTTCGAGATAATGCAGATGCTGAACTGAATGAGAAGTCAAGTGATGATTTAGAGGCTACCAATCTAAAGGATACAAATATATCCGA
TGTAGATGTATCTACTGAATATAAACCACAAGTTTTTGAAAGTTTTGAGATGCTTCCTCGAAAGGATGCTGATGTAGGAGTATAG

Protein sequence

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MHSDSKMNLRDNADAELNEKSSDDLEATNLKDTNISDVDVSTEYKPQVFESFEMLPRKDADVGV

HG10012888 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome