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HG10012933 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012933
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein RALF-like 24
Genome locationChr01:25441873..25442241
RNA-Seq ExpressionHG10012933
SyntenyHG10012933
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582492.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia]4.9e-6091.27Show/hide
Query:  MANPILFFLF----PLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M NP LFFLF    PLVFLQTHFSFCDAILDLRS KGSE+D+MAKGVCNQKIGECLT+PEMESE+SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MANPILFFLF----PLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

XP_008438316.1 PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo]9.3e-5993.44Show/hide
Query:  ILFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA
        + FFL    FPLVFLQTHFSFCDAILDLRSFKGSEMD+MAKGVCNQKIGECLT PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA
Subjt:  ILFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA

Query:  NSYDRGCEVITRCARDVHDINT
        NSYDRGCEVITRCARDVHDINT
Subjt:  NSYDRGCEVITRCARDVHDINT

XP_011650863.1 protein RALF-like 24 [Cucumis sativus]1.2e-5894.21Show/hide
Query:  LFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN
        LFFL    FPLVFLQTHFSFCDAILDLRSFKGSEM++MAKGVCNQKIGECLT PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN
Subjt:  LFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN

Query:  SYDRGCEVITRCARDVHDINT
        SYDRGCEVITRCARDVHDINT
Subjt:  SYDRGCEVITRCARDVHDINT

XP_023526933.1 protein RALF-like 24 [Cucurbita pepo subsp. pepo]4.9e-6091.27Show/hide
Query:  MANPILFFLF----PLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M NP LFFLF    PLVFLQTHFSFCDAILDLRS KGSE+D+MAKGVCNQKIGECLT+PEMESE+SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MANPILFFLF----PLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

XP_038875978.1 protein RALF-like 24 [Benincasa hispida]3.1e-6294.44Show/hide
Query:  MANPILFFLF----PLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MANPILFF F    PLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLT+PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MANPILFFLF----PLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCE+ITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

TrEMBL top hitse value%identityAlignment
A0A0A0L7V8 Uncharacterized protein5.9e-5994.21Show/hide
Query:  LFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN
        LFFL    FPLVFLQTHFSFCDAILDLRSFKGSEM++MAKGVCNQKIGECLT PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN
Subjt:  LFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN

Query:  SYDRGCEVITRCARDVHDINT
        SYDRGCEVITRCARDVHDINT
Subjt:  SYDRGCEVITRCARDVHDINT

A0A1S3AWQ1 protein RALF-like 24 isoform X14.5e-5993.44Show/hide
Query:  ILFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA
        + FFL    FPLVFLQTHFSFCDAILDLRSFKGSEMD+MAKGVCNQKIGECLT PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA
Subjt:  ILFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA

Query:  NSYDRGCEVITRCARDVHDINT
        NSYDRGCEVITRCARDVHDINT
Subjt:  NSYDRGCEVITRCARDVHDINT

A0A5D3CZU4 Protein RALF-like 24 isoform X14.5e-5993.44Show/hide
Query:  ILFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA
        + FFL    FPLVFLQTHFSFCDAILDLRSFKGSEMD+MAKGVCNQKIGECLT PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA
Subjt:  ILFFL----FPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA

Query:  NSYDRGCEVITRCARDVHDINT
        NSYDRGCEVITRCARDVHDINT
Subjt:  NSYDRGCEVITRCARDVHDINT

A0A6J1D019 protein RALF-like 24 isoform X12.8e-5382.54Show/hide
Query:  MANPILFF----LFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MA P L +    L  +VF  THFSFCDAILDLRS KGS++D+MAKGVCNQKIGECLT+PEMESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYECH
Subjt:  MANPILFF----LFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
         GPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

A0A6J1IH73 protein RALF-like 249.4e-5784.92Show/hide
Query:  MANPILFF----LFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MA P LFF    L PL+FLQTHF FCDA+LDLRS KG+++DLM KGVCNQKIGECLT+P+MESEISRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECH
Subjt:  MANPILFF----LFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

SwissProt top hitse value%identityAlignment
Q2HIM9 Protein RALF-like 313.5e-2462.5Show/hide
Query:  EMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT
        E+D M   + N  IGE   +  M +EISRRVLM QK+YI Y+TLRRDMVPC +PG SYY+C  G ANSY RGC+ ITRCARD +DINT
Subjt:  EMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT

Q8L9P8 Protein RALF-like 333.3e-1446.36Show/hide
Query:  LVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQP-----EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDR
        +  L  HF F  A+    S  G  + + +K  CN  I EC         EM+SEI+RR+L    KYISY  LRR+ VPCSR G SYY C  G  AN Y R
Subjt:  LVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQP-----EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDR

Query:  GCEVITRCAR
        GC  ITRC R
Subjt:  GCEVITRCAR

Q945T0 Rapid alkalinization factor2.9e-1551.22Show/hide
Query:  MDLMAKGVCNQKIGECLTQP---EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC
        M   + G C   IGEC+ +    E++SE +RR+L   KKYISY  L+++ VPCSR G SYY C PG  AN Y RGC  ITRC
Subjt:  MDLMAKGVCNQKIGECLTQP---EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC

Q9LK37 Protein RALF-like 241.8e-2552.46Show/hide
Query:  MANPILFFLFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA
        M+  +      L+ LQTH S     + + S  G E+D M     N  IGE   +  M SEISRRV+MM+K+YISY+TLRRDMVPC +PG SYY C  G A
Subjt:  MANPILFFLFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA

Query:  NSYDRGCEVITRCARDVHDINT
        N+Y+RGC VITRCARD +DI T
Subjt:  NSYDRGCEVITRCARDVHDINT

Q9MA62 Protein RALF-like 222.9e-1555.26Show/hide
Query:  CNQKIGECLTQP---EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR
        C   I EC+ +    E +S+ISRR+L  QKKYISY  +RR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  CNQKIGECLTQP---EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.5e-1453.42Show/hide
Query:  CNQKIGECL--TQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC
        C+  I EC+   + EM+SEI+RR+L    KYISY +L+R+ VPCSR G SYY C  G  AN Y RGC  I RC
Subjt:  CNQKIGECL--TQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC

AT3G05490.1 ralf-like 222.1e-1655.26Show/hide
Query:  CNQKIGECLTQP---EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR
        C   I EC+ +    E +S+ISRR+L  QKKYISY  +RR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  CNQKIGECLTQP---EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR

AT3G23805.1 ralf-like 241.3e-2652.46Show/hide
Query:  MANPILFFLFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA
        M+  +      L+ LQTH S     + + S  G E+D M     N  IGE   +  M SEISRRV+MM+K+YISY+TLRRDMVPC +PG SYY C  G A
Subjt:  MANPILFFLFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPA

Query:  NSYDRGCEVITRCARDVHDINT
        N+Y+RGC VITRCARD +DI T
Subjt:  NSYDRGCEVITRCARDVHDINT

AT4G13950.1 ralf-like 312.5e-2562.5Show/hide
Query:  EMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT
        E+D M   + N  IGE   +  M +EISRRVLM QK+YI Y+TLRRDMVPC +PG SYY+C  G ANSY RGC+ ITRCARD +DINT
Subjt:  EMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT

AT4G15800.1 ralf-like 332.3e-1546.36Show/hide
Query:  LVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQP-----EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDR
        +  L  HF F  A+    S  G  + + +K  CN  I EC         EM+SEI+RR+L    KYISY  LRR+ VPCSR G SYY C  G  AN Y R
Subjt:  LVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQP-----EMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDR

Query:  GCEVITRCAR
        GC  ITRC R
Subjt:  GCEVITRCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACCCCATTCTCTTCTTCCTTTTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGCGATGCGATTCTTGATCTCAGATCTTTCAAGGGCAGTGAAATGGA
TTTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGTGAGTGTCTGACTCAGCCAGAAATGGAATCAGAAATCAGCAGGAGAGTTCTGATGATGCAGAAGAAGTATATAA
GCTACGATACACTTAGAAGGGACATGGTTCCTTGTTCAAGACCAGGCGTTTCATATTATGAATGTCATCCTGGTCCAGCAAATTCTTACGACAGAGGCTGTGAAGTCATT
ACTAGATGTGCTAGAGATGTTCATGACATAAACACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACCCCATTCTCTTCTTCCTTTTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGCGATGCGATTCTTGATCTCAGATCTTTCAAGGGCAGTGAAATGGA
TTTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGTGAGTGTCTGACTCAGCCAGAAATGGAATCAGAAATCAGCAGGAGAGTTCTGATGATGCAGAAGAAGTATATAA
GCTACGATACACTTAGAAGGGACATGGTTCCTTGTTCAAGACCAGGCGTTTCATATTATGAATGTCATCCTGGTCCAGCAAATTCTTACGACAGAGGCTGTGAAGTCATT
ACTAGATGTGCTAGAGATGTTCATGACATAAACACTTGA
Protein sequenceShow/hide protein sequence
MANPILFFLFPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTQPEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVI
TRCARDVHDINT