; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10012941 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10012941
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncytochrome c oxidase-assembly factor COX23, mitochondrial
Genome locationChr01:25512979..25514986
RNA-Seq ExpressionHG10012941
SyntenyHG10012941
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049122.1 cytochrome c oxidase-assembly factor COX23 [Cucumis melo var. makuwa]1.1e-2794.52Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLE +SSEKSKCQEHFDVYKECKKKERE RLERNK RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
XP_004133972.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucumis sativus]1.9e-2793.15Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MASTSRDP PPY SAARISDSPCYPQYSASLKCLE HSSEKSKCQEHFDVYKECKKKERE RLERNK RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
XP_022147041.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Momordica charantia]5.1e-2893.15Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MAST+RD APPYASAARISDSPCYPQYSASLKCLEEHSSEK+KCQEHFDVYKECKKKERE RLERN+KRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
XP_022924627.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita moschata]3.0e-2893.15Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MASTSRDP+PPY SAARISDSPC+PQYSASLKCLEEHSSE+SKCQEHFDVYKECKKKERE RLERNKKRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
XP_038906947.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Benincasa hispida]3.0e-2893.15Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEH+SEKSKC+EHFDVYKECKKKERE RLERN+ RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
TrEMBL top hitse value%identityAlignment
A0A0A0L4K5 CHCH domain-containing protein9.4e-2893.15Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MASTSRDP PPY SAARISDSPCYPQYSASLKCLE HSSEKSKCQEHFDVYKECKKKERE RLERNK RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
A0A5A7U004 Cytochrome c oxidase-assembly factor COX235.5e-2894.52Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MASTSRDPAPPYASAARISDSPCYPQYSASLKCLE +SSEKSKCQEHFDVYKECKKKERE RLERNK RSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
A0A6J1D157 cytochrome c oxidase-assembly factor COX23, mitochondrial2.5e-2893.15Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MAST+RD APPYASAARISDSPCYPQYSASLKCLEEHSSEK+KCQEHFDVYKECKKKERE RLERN+KRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
A0A6J1E9H8 cytochrome c oxidase-assembly factor COX23, mitochondrial1.4e-2893.15Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MASTSRDP+PPY SAARISDSPC+PQYSASLKCLEEHSSE+SKCQEHFDVYKECKKKERE RLERNKKRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
A0A6J1ITM4 cytochrome c oxidase-assembly factor COX23, mitochondrial3.6e-2791.78Show/hide
Query:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        MASTSRDP PPY SAARISDSPC+ QYSASLKCLEEHSSE+SKCQEHFDVYKECKKKERE RLERNKKRSFFS
Subjt:  MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02160.1 Cox19 family protein (CHCH motif)2.0e-2277.14Show/hide
Query:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
        +++  A  Y SAARISDSPCY QYSASLKCLEE  S+KSKCQ+HFDVYKECKKKERE RLERNK RS FS
Subjt:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS
AT1G02160.2 Cox19 family protein (CHCH motif)7.3e-1776.36Show/hide
Query:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKE
        +++  A  Y SAARISDSPCY QYSASLKCLEE  S+KSKCQ+HFDVYKECKKKE
Subjt:  TSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTTCTAGGGATCCGGCTCCGCCGTACGCCAGTGCTGCTAGAATTTCCGATTCTCCTTGTTATCCTCAGTACAGCGCTTCCCTGAAATGTCTTGAAGAACA
TAGCTCCGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAGAAAGAGCGGGAAGATCGATTGGAACGCAACAAGAAACGGTCTTTCTTCTCAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACTTCTAGGGATCCGGCTCCGCCGTACGCCAGTGCTGCTAGAATTTCCGATTCTCCTTGTTATCCTCAGTACAGCGCTTCCCTGAAATGTCTTGAAGAACA
TAGCTCCGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAGAAAGAGCGGGAAGATCGATTGGAACGCAACAAGAAACGGTCTTTCTTCTCAT
GA
Protein sequenceShow/hide protein sequence
MASTSRDPAPPYASAARISDSPCYPQYSASLKCLEEHSSEKSKCQEHFDVYKECKKKEREDRLERNKKRSFFS