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HG10013034 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013034
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box family protein
Genome locationChr01:26302500..26304421
RNA-Seq ExpressionHG10013034
SyntenyHG10013034
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134378.3 putative F-box protein PP2-B12 [Cucumis sativus]4.1e-1138.89Show/hide
Query:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE--MIEEPLETFRPFKPILPYLYLGREE--EKKRKQAF----EGFPM---ERED
        ++ P+ +F   A++     +++KGKIE + LSPKT Y AYFVFKF+E     +   T    KP+   +Y   EE  E   K       EG P+   ER D
Subjt:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE--MIEEPLETFRPFKPILPYLYLGREE--EKKRKQAF----EGFPM---ERED

Query:  GWMELKMGQFFTQ-GDDLSIIFNI--YPTCLPCRFIFEGIEFRP
        GWME++MG+FF + GDD  +IF++      +    I EGIE RP
Subjt:  GWMELKMGQFFTQ-GDDLSIIFNI--YPTCLPCRFIFEGIEFRP

XP_011650883.2 putative F-box protein PP2-B12 [Cucumis sativus]1.1e-1139.16Show/hide
Query:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPL--ETFRPFKPILPYLYLGRE-EEKKRKQA----FEGFP---MEREDG
        ++ P+ +FS  A++++   +++KGKIE + LSPKT Y AYFVFK   ++E+      F      L   + G E EE +RK+      EG     +ER DG
Subjt:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPL--ETFRPFKPILPYLYLGRE-EEKKRKQA----FEGFP---MEREDG

Query:  WMELKMGQFFTQ-GDDLSIIFNI--YPTCLPCRFIFEGIEFRP
        WME++MG+FF + GDD SIIF++           I EG+E RP
Subjt:  WMELKMGQFFTQ-GDDLSIIFNI--YPTCLPCRFIFEGIEFRP

XP_022960303.1 F-box protein PP2-B11-like isoform X2 [Cucurbita moschata]2.1e-1038.03Show/hide
Query:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF----EGFP---MEREDGWME
        E  P  +F   A ++    ++++G+IEA+ LS KT Y A+FVFK    + E  + F   KP+   +Y   ++ ++ KQ      EG P    ER+DGWME
Subjt:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF----EGFP---MEREDGWME

Query:  LKMGQFFT-QGDDLSIIFNIYPTC-LPCR-FIFEGIEFRPIS
        + MG+F+   GDD SIIFN+      P +  I EGIE RP++
Subjt:  LKMGQFFT-QGDDLSIIFNIYPTC-LPCR-FIFEGIEFRPIS

XP_023528482.1 putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo]2.1e-1038.03Show/hide
Query:  TSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLET--FRPFKPILPYLYLGREEEKKRKQAF----EGFPM---EREDGWM
        ++P  +FS  A+++    +++KG+IEA+ LSP+T Y AY VFK   ++E+  +   FR  +P+L  +Y    E ++ K A     EG  +   ER DGWM
Subjt:  TSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLET--FRPFKPILPYLYLGREEEKKRKQAF----EGFPM---EREDGWM

Query:  ELKMGQFFTQ-GDDLSIIFNI---YPTCLPCRFIFEGIEFRP
        E++MG+ F + GDD SIIF++   +        I EGIE RP
Subjt:  ELKMGQFFTQ-GDDLSIIFNI---YPTCLPCRFIFEGIEFRP

XP_031282159.1 F-box protein At2g02240-like [Pistacia vera]1.6e-1035Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF----EGFP---MEREDGWMELKM
        P  +F   A+++     ++KGKIE K+LSP+T Y AY VFKF +      +T    +P+    Y+G  EE++R + F     G P    +R DGWME+++
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF----EGFP---MEREDGWMELKM

Query:  GQFFTQ-GDDLSIIFNIYP---TCLPCRFIFEGIEFRPIS
        G+FF + G++  +++N++           I EGIE RP S
Subjt:  GQFFTQ-GDDLSIIFNIYP---TCLPCRFIFEGIEFRPIS

TrEMBL top hitse value%identityAlignment
A0A0A0L445 F-box domain-containing protein1.0e-1038.19Show/hide
Query:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE--MIEEPLETFRPFKPILPYLYLGREE--EKKRKQAF----EGFPM---ERED
        ++ P+ +F   A++     +++KGKIE + LSPKT Y AYFVFKF+E     +   T    KP+   +Y   EE  E   K       EG P+   ER D
Subjt:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE--MIEEPLETFRPFKPILPYLYLGREE--EKKRKQAF----EGFPM---ERED

Query:  GWMELKMGQFFTQ-GDDLSIIFNI--YPTCLPCRFIFEGIEFRP
        GWME++MG+FF + GDD  +IF++      +    I EGIE  P
Subjt:  GWMELKMGQFFTQ-GDDLSIIFNI--YPTCLPCRFIFEGIEFRP

A0A0A0L9G5 F-box domain-containing protein5.3e-1239.16Show/hide
Query:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPL--ETFRPFKPILPYLYLGRE-EEKKRKQA----FEGFP---MEREDG
        ++ P+ +FS  A++++   +++KGKIE + LSPKT Y AYFVFK   ++E+      F      L   + G E EE +RK+      EG     +ER DG
Subjt:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPL--ETFRPFKPILPYLYLGRE-EEKKRKQA----FEGFP---MEREDG

Query:  WMELKMGQFFTQ-GDDLSIIFNI--YPTCLPCRFIFEGIEFRP
        WME++MG+FF + GDD SIIF++           I EG+E RP
Subjt:  WMELKMGQFFTQ-GDDLSIIFNI--YPTCLPCRFIFEGIEFRP

A0A6J1EFS1 putative F-box protein PP2-B121.7e-1038.3Show/hide
Query:  SPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLET--FRPFKPILPYLYLGREEEKKRKQAF----EGFPM---EREDGWME
        +P  +FS  A+++    +++KG+IEA+ LSP+T Y AY VFK   ++E+  +   FR  +P+L  +Y    E ++ K A     EG  +   ER DGWME
Subjt:  SPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLET--FRPFKPILPYLYLGREEEKKRKQAF----EGFPM---EREDGWME

Query:  LKMGQFFTQ-GDDLSIIFNI---YPTCLPCRFIFEGIEFRP
        ++MG+ F + GDD SIIF++   +        I EGIE RP
Subjt:  LKMGQFFTQ-GDDLSIIFNI---YPTCLPCRFIFEGIEFRP

A0A6J1H715 F-box protein PP2-B11-like isoform X11.0e-1038.03Show/hide
Query:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF----EGFP---MEREDGWME
        E  P  +F   A ++    ++++G+IEA+ LS KT Y A+FVFK    + E  + F   KP+   +Y   ++ ++ KQ      EG P    ER+DGWME
Subjt:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF----EGFP---MEREDGWME

Query:  LKMGQFFT-QGDDLSIIFNIYPTC-LPCR-FIFEGIEFRPIS
        + MG+F+   GDD SIIFN+      P +  I EGIE RP++
Subjt:  LKMGQFFT-QGDDLSIIFNIYPTC-LPCR-FIFEGIEFRPIS

A0A6J1H8G3 F-box protein PP2-B11-like isoform X21.0e-1038.03Show/hide
Query:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF----EGFP---MEREDGWME
        E  P  +F   A ++    ++++G+IEA+ LS KT Y A+FVFK    + E  + F   KP+   +Y   ++ ++ KQ      EG P    ER+DGWME
Subjt:  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF----EGFP---MEREDGWME

Query:  LKMGQFFT-QGDDLSIIFNIYPTC-LPCR-FIFEGIEFRPIS
        + MG+F+   GDD SIIFN+      P +  I EGIE RP++
Subjt:  LKMGQFFT-QGDDLSIIFNIYPTC-LPCR-FIFEGIEFRPIS

SwissProt top hitse value%identityAlignment
Q3E6P4 F-box protein At2g022401.5e-0829.5Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEM--------IEEPLETFRPFKPILPYLYLGREEEKKRKQAFE-GFPMEREDGWMEL
        P  +F++ A++      +++GK  A++LSP T Y AY VFK ++         +E  L             ++G  + + R++  +   P +REDGWME 
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEM--------IEEPLETFRPFKPILPYLYLGREEEKKRKQAFE-GFPMEREDGWMEL

Query:  KMGQFFTQGDDLSIIFNIYPTCLP---CRFIFEGIEFRP
        ++G+FF +     I F++     P      I +GIEFRP
Subjt:  KMGQFFTQGDDLSIIFNIYPTCLP---CRFIFEGIEFRP

Q949S5 F-box protein PP2-B114.2e-0630.77Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPL---ETFRPFKPILP-YLYLGREEEKKRKQAFEGFPMEREDGWM
        P+ +F   A++     +++ GKI   +LS  T Y AYFVFK       F + +E  L   +T      + P  + L ++   +  Q+    P+ R DGW 
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPL---ETFRPFKPILP-YLYLGREEEKKRKQAFEGFPMEREDGWM

Query:  ELKMGQFFTQGDDL-SIIFNIYPTCLPCR---FIFEGIEFRPI
        E+++GQFF +  DL  I  ++  T  P      I  GIE RP+
Subjt:  ELKMGQFFTQGDDL-SIIFNIYPTCLPCR---FIFEGIEFRPI

Q9C7J9 F-box protein PP2-B135.8e-0827.01Show/hide
Query:  YYDETTILDLETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE----MIEEPLETFRPFK-----PILPYLYLGREEEKKRKQAFE
        Y D  +          +FS +A++    R+++KGKI+  +LSP T YGAY + K       +   P ET    K         YL    E++++ K+ F 
Subjt:  YYDETTILDLETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE----MIEEPLETFRPFK-----PILPYLYLGREEEKKRKQAFE

Query:  G--------------------FPMEREDGWMELKMGQFFT-QGDDLSI---IFNIYPTCLPCRFIFEGIEFRPI
        G                     P  R+DGW+E+++G+F T +G+D  +   +  +    L    + +GIE RPI
Subjt:  G--------------------FPMEREDGWMELKMGQFFT-QGDDLSI---IFNIYPTCLPCRFIFEGIEFRPI

Q9FLU7 Putative F-box protein PP2-B129.9e-0830.3Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF--EGFPMEREDGWMELKMGQFFT
        P  +F   A +      +++GKI   +LS  T Y AY VFK +EM     E+     P+       R E    ++ F   G    REDGW+E+++G+++ 
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF--EGFPMEREDGWMELKMGQFFT

Query:  QGDDLSIIFNIYPT---CLPCRFIFEGIEFRP
          DD  I  ++  T         I +GIE RP
Subjt:  QGDDLSIIFNIYPT---CLPCRFIFEGIEFRP

Q9ZVQ6 F-box protein PP2-B103.4e-0828.57Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAFEGFPMEREDGWMELKM
        P  +F + A +      +++G+   ++LSP+T Y AY VFK       F+ +  E        +P    +       + R+   +  P +REDGWME+++
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAFEGFPMEREDGWMELKM

Query:  GQFFTQG---DDLSIIFNIYPT---CLPCRFIFEGIEFRP
        G+FF  G   D+  I  +   T      C  I +GIE RP
Subjt:  GQFFTQG---DDLSIIFNIYPT---CLPCRFIFEGIEFRP

Arabidopsis top hitse value%identityAlignment
AT1G56240.1 phloem protein 2-B134.1e-0927.01Show/hide
Query:  YYDETTILDLETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE----MIEEPLETFRPFK-----PILPYLYLGREEEKKRKQAFE
        Y D  +          +FS +A++    R+++KGKI+  +LSP T YGAY + K       +   P ET    K         YL    E++++ K+ F 
Subjt:  YYDETTILDLETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE----MIEEPLETFRPFK-----PILPYLYLGREEEKKRKQAFE

Query:  G--------------------FPMEREDGWMELKMGQFFT-QGDDLSI---IFNIYPTCLPCRFIFEGIEFRPI
        G                     P  R+DGW+E+++G+F T +G+D  +   +  +    L    + +GIE RPI
Subjt:  G--------------------FPMEREDGWMELKMGQFFT-QGDDLSI---IFNIYPTCLPCRFIFEGIEFRPI

AT1G80110.1 phloem protein 2-B113.0e-0730.77Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPL---ETFRPFKPILP-YLYLGREEEKKRKQAFEGFPMEREDGWM
        P+ +F   A++     +++ GKI   +LS  T Y AYFVFK       F + +E  L   +T      + P  + L ++   +  Q+    P+ R DGW 
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPL---ETFRPFKPILP-YLYLGREEEKKRKQAFEGFPMEREDGWM

Query:  ELKMGQFFTQGDDL-SIIFNIYPTCLPCR---FIFEGIEFRPI
        E+++GQFF +  DL  I  ++  T  P      I  GIE RP+
Subjt:  ELKMGQFFTQGDDL-SIIFNIYPTCLPCR---FIFEGIEFRPI

AT2G02240.1 F-box family protein1.1e-0929.5Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEM--------IEEPLETFRPFKPILPYLYLGREEEKKRKQAFE-GFPMEREDGWMEL
        P  +F++ A++      +++GK  A++LSP T Y AY VFK ++         +E  L             ++G  + + R++  +   P +REDGWME 
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEM--------IEEPLETFRPFKPILPYLYLGREEEKKRKQAFE-GFPMEREDGWMEL

Query:  KMGQFFTQGDDLSIIFNIYPTCLP---CRFIFEGIEFRP
        ++G+FF +     I F++     P      I +GIEFRP
Subjt:  KMGQFFTQGDDLSIIFNIYPTCLP---CRFIFEGIEFRP

AT2G02360.1 phloem protein 2-B102.4e-0928.57Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAFEGFPMEREDGWMELKM
        P  +F + A +      +++G+   ++LSP+T Y AY VFK       F+ +  E        +P    +       + R+   +  P +REDGWME+++
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAFEGFPMEREDGWMELKM

Query:  GQFFTQG---DDLSIIFNIYPT---CLPCRFIFEGIEFRP
        G+FF  G   D+  I  +   T      C  I +GIE RP
Subjt:  GQFFTQG---DDLSIIFNIYPT---CLPCRFIFEGIEFRP

AT5G24560.1 phloem protein 2-B127.1e-0930.3Show/hide
Query:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF--EGFPMEREDGWMELKMGQFFT
        P  +F   A +      +++GKI   +LS  T Y AY VFK +EM     E+     P+       R E    ++ F   G    REDGW+E+++G+++ 
Subjt:  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAF--EGFPMEREDGWMELKMGQFFT

Query:  QGDDLSIIFNIYPT---CLPCRFIFEGIEFRP
          DD  I  ++  T         I +GIE RP
Subjt:  QGDDLSIIFNIYPT---CLPCRFIFEGIEFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATATGATTGGTTCAAGGAAGATGGATACTATGATGAGACAACCATATTGGACTTGGAAACGAGTCCCTCAATCAAGTTTTCTCGCGCTGCTGATGTGGAGTTCGA
AAGTCGAATTCAAATGAAAGGGAAGATAGAAGCCAAAATCTTGAGTCCAAAAACCTACTATGGAGCTTATTTTGTGTTCAAGTTTGAGGAGATGATAGAAGAACCTTTAG
AAACTTTTCGTCCCTTTAAACCAATTCTACCATACCTTTATCTTGGAAGAGAGGAGGAGAAGAAGAGAAAGCAGGCTTTTGAAGGTTTTCCTATGGAAAGAGAAGATGGA
TGGATGGAGCTTAAGATGGGCCAATTTTTTACCCAAGGAGATGATCTCTCAATTATTTTCAATATTTATCCCACTTGTTTACCATGTAGGTTCATTTTTGAAGGAATTGA
GTTTAGGCCAATCTCTAAAGATATTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTATATGATTGGTTCAAGGAAGATGGATACTATGATGAGACAACCATATTGGACTTGGAAACGAGTCCCTCAATCAAGTTTTCTCGCGCTGCTGATGTGGAGTTCGA
AAGTCGAATTCAAATGAAAGGGAAGATAGAAGCCAAAATCTTGAGTCCAAAAACCTACTATGGAGCTTATTTTGTGTTCAAGTTTGAGGAGATGATAGAAGAACCTTTAG
AAACTTTTCGTCCCTTTAAACCAATTCTACCATACCTTTATCTTGGAAGAGAGGAGGAGAAGAAGAGAAAGCAGGCTTTTGAAGGTTTTCCTATGGAAAGAGAAGATGGA
TGGATGGAGCTTAAGATGGGCCAATTTTTTACCCAAGGAGATGATCTCTCAATTATTTTCAATATTTATCCCACTTGTTTACCATGTAGGTTCATTTTTGAAGGAATTGA
GTTTAGGCCAATCTCTAAAGATATTGAATAA
Protein sequenceShow/hide protein sequence
MLYDWFKEDGYYDETTILDLETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAFEGFPMEREDG
WMELKMGQFFTQGDDLSIIFNIYPTCLPCRFIFEGIEFRPISKDIE