; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013065 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013065
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionrRNA adenine N(6)-methyltransferase
Genome locationChr01:26567956..26572336
RNA-Seq ExpressionHG10013065
SyntenyHG10013065
Gene Ontology termsGO:0031167 - rRNA methylation (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity (molecular function)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001737 - Ribosomal RNA adenine methyltransferase KsgA/Erm
IPR011530 - Ribosomal RNA adenine dimethylase
IPR020596 - Ribosomal RNA adenine methylase transferase, conserved site
IPR020598 - Ribosomal RNA adenine methylase transferase, N-terminal
IPR023165 - rRNA adenine dimethylase-like, C-terminal
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049001.1 ribosomal RNA small subunit methyltransferase [Cucumis melo var. makuwa]8.2e-16992.22Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAAPPLP   LPP S TSYR+SP    PASTA AG+R ATPF++CSAATVRVGEGVNPDDYHSTLRALNSKGR+PRKSLGQHYMLNSSINEQLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFA+TNRLKVLNEDFVKCHVSSHMMS LKSIELS++RSQPAKVVSNIPFNISTDIIKQL
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMGDIFSEVVLLLQEEAALRLVE SLR SEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAAD PAVSSTKSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        LRKSLQHICTS EIE+ALEDSSLP TSRPEELSLDDFV LHNLIVKQ
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

XP_004133887.1 ribosomal RNA small subunit methyltransferase, chloroplastic [Cucumis sativus]7.2e-16590.17Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAA PLP   LPP SPTS  +SP    P ST+  G+R ATPF++CSAA+VRVGEGVNPDDYHST+RALNSKGR+PRKSLGQHYMLNSSINEQLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMA LVDERFA+TNRLKVLNEDFVKC+VSSHMMSLLKSIELS++RSQPAKVVSNIPFNISTDIIKQL
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMGDIFSEVVLLLQEEAALRLVE SLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLK+AADYPAVSSTKSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVK
        LRKSLQHICTSLEIE+ALEDSSL  TSRPEELSLDDFV LHNLIVK
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVK

XP_008438106.1 PREDICTED: ribosomal RNA small subunit methyltransferase, chloroplastic [Cucumis melo]4.1e-16891.93Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAAPPLP   LPP S TSYR+SP    PASTA AG+R A PF++CSAATVRVGEGVNPDDYHSTLRALNSKGR+PRKSLGQHYMLNSSINEQLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFA+TNRLKVLNEDFVKCHVSSHMMS LKSIELS++RSQPAKVVSNIPFNISTDIIKQL
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMGDIFSEVVLLLQEEAALRLVE SLR SEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAAD PAVSSTKSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        LRKSLQHICTS EIE+ALEDSSLP TSRPEELSLDDFV LHNLIVKQ
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

XP_022147255.1 ribosomal RNA small subunit methyltransferase, chloroplastic isoform X1 [Momordica charantia]2.2e-16690.2Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAAP LP L LPPISP S  +SPK   P S+ATAGARR TPF+ACSAATVR G  VNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSIN+QLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLTN+LINSGATVLAVEKD YMAA+VDERFASTNRLKVLNEDFVKCHVSSHMMSLLK +ELSDS+SQPAKVVSNIPFNISTD+IKQL
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMG+IFSEVVLLLQEE ALRLVEASLRTSEYRPIN+FVNFYSDPE KFKVPRT+FFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        LRKSLQHICTSLEIERALE SSLPATSRPEELSL+DFV LHNLIV+Q
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

XP_038878140.1 ribosomal RNA small subunit methyltransferase, chloroplastic [Benincasa hispida]1.0e-17193.41Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPAS--TATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAAN
        MAAPPLP L LPP SPTSYR SP S   AS  TATAGARRATPF+ACS+AT RVGEGVNPDDYHSTLRALNSKGR PRKSLGQHYMLNSSINEQLAAAAN
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPAS--TATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAAN

Query:  VKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIK
        VKEGDVVLEIGPGTGSLTNVLI++GATVLAVEKDSYMAALVDERFA+TNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIK
Subjt:  VKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIK

Query:  QLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKR
        QLLPMGDIFSEVVLLLQEEAALRLVE SLRTSEYRPINVFVNFYS PELKFKVPRTNFFPQPNVDAAVVSFKLKQ+ADYPAVSSTKSFFSMVNSAFNGKR
Subjt:  QLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKR

Query:  KMLRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        KMLRKSLQHICTSLEIERAL+DSSLPATSRPEELSLDDFV LHNLIV+Q
Subjt:  KMLRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

TrEMBL top hitse value%identityAlignment
A0A0A0L7J6 rRNA adenine N(6)-methyltransferase3.5e-16590.17Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAA PLP   LPP SPTS  +SP    P ST+  G+R ATPF++CSAA+VRVGEGVNPDDYHST+RALNSKGR+PRKSLGQHYMLNSSINEQLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMA LVDERFA+TNRLKVLNEDFVKC+VSSHMMSLLKSIELS++RSQPAKVVSNIPFNISTDIIKQL
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMGDIFSEVVLLLQEEAALRLVE SLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLK+AADYPAVSSTKSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVK
        LRKSLQHICTSLEIE+ALEDSSL  TSRPEELSLDDFV LHNLIVK
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVK

A0A1S3AW66 rRNA adenine N(6)-methyltransferase2.0e-16891.93Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAAPPLP   LPP S TSYR+SP    PASTA AG+R A PF++CSAATVRVGEGVNPDDYHSTLRALNSKGR+PRKSLGQHYMLNSSINEQLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFA+TNRLKVLNEDFVKCHVSSHMMS LKSIELS++RSQPAKVVSNIPFNISTDIIKQL
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMGDIFSEVVLLLQEEAALRLVE SLR SEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAAD PAVSSTKSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        LRKSLQHICTS EIE+ALEDSSLP TSRPEELSLDDFV LHNLIVKQ
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

A0A5A7U5Y1 rRNA adenine N(6)-methyltransferase4.0e-16992.22Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAAPPLP   LPP S TSYR+SP    PASTA AG+R ATPF++CSAATVRVGEGVNPDDYHSTLRALNSKGR+PRKSLGQHYMLNSSINEQLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFA+TNRLKVLNEDFVKCHVSSHMMS LKSIELS++RSQPAKVVSNIPFNISTDIIKQL
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMGDIFSEVVLLLQEEAALRLVE SLR SEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAAD PAVSSTKSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        LRKSLQHICTS EIE+ALEDSSLP TSRPEELSLDDFV LHNLIVKQ
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

A0A6J1CZM8 rRNA adenine N(6)-methyltransferase1.1e-16690.2Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAAP LP L LPPISP S  +SPK   P S+ATAGARR TPF+ACSAATVR G  VNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSIN+QLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLTN+LINSGATVLAVEKD YMAA+VDERFASTNRLKVLNEDFVKCHVSSHMMSLLK +ELSDS+SQPAKVVSNIPFNISTD+IKQL
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMG+IFSEVVLLLQEE ALRLVEASLRTSEYRPIN+FVNFYSDPE KFKVPRT+FFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        LRKSLQHICTSLEIERALE SSLPATSRPEELSL+DFV LHNLIV+Q
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

A0A6J1IAM1 rRNA adenine N(6)-methyltransferase1.9e-16389.34Show/hide
Query:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
        MAAPPLP L LPPISPT+  +SPK C PA+T T GARRATPF++CSAATVR G  VNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK
Subjt:  MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVK

Query:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL
        EGDVVLEIGPGTGSLT+VLI+ GATVLAVEKDSYMAALVDERFA TNRLKVLNEDF KCH+SSHM SLLKSIELSDS+SQPAKVVSNIPFNISTDIIK L
Subjt:  EGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQL

Query:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM
        LPMGDIFSEVVLLLQEE ALRLV++S  TSE RPINVFVNFYSDPE KFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSS KSFFSMVNSAFNGKRKM
Subjt:  LPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKM

Query:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        LRKSLQHI T+LEIERALED SLPATSRPEELSLDDFV LHNLIVKQ
Subjt:  LRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

SwissProt top hitse value%identityAlignment
C1CMT3 Ribosomal RNA small subunit methyltransferase A6.4e-3131.06Show/hide
Query:  DYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKC
        DY  T   L   G   +KS GQ+++ +++I +++   A + +   V+EIGPG G+LT  L    A V+A E D  +  ++ +     + + V+NED +K 
Subjt:  DYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKC

Query:  HVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQ
         ++ H+ +  K+ +L      P KVV+N+P+ I+T I+  L+  G  FSE V+++Q+E A R + A   T  Y  +++ V +Y   ++ F VPRT F P 
Subjt:  HVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQ

Query:  PNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLE-----IERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ
        PNVD+A++   +++     AV     FF +  ++F  +RK L  +L       E     + +AL+ + L  + R E LSL++F  L + +  Q
Subjt:  PNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLE-----IERALEDSSLPATSRPEELSLDDFVWLHNLIVKQ

O65090 Ribosomal RNA small subunit methyltransferase, chloroplastic1.6e-11968.71Show/hide
Query:  SPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLIN
        SP   L    + A +RR T  ++C  +        +PDDYHSTL++LNS+GR PRKSLGQHYMLNS IN+QLA+AA+VKEGD VLEIGPGTGSLTNVLIN
Subjt:  SPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLIN

Query:  SGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALR
         GATVLA+EKD +M  LV ERFA +++ KVL EDFVKCH+ SHM+S+L++  LS   S  AKVVSN+PFNISTD++K LLPMGDIFS+VVLLLQ+EAALR
Subjt:  SGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALR

Query:  LVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIERALEDS
        LVE +LRTSEYRPIN+ +NFYS+PE  F+VPR NFFPQP VDAAVV+FKLK   DYP VSSTK+FFS+VNSAFNGKRKMLRKSLQHI +S +IE+AL  +
Subjt:  LVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIERALEDS

Query:  SLPATSRPEELSLDDFVWLHNLIVKQ
         LPATSRPEEL+LDDFV LHN+I ++
Subjt:  SLPATSRPEELSLDDFVWLHNLIVKQ

Q03T56 Ribosomal RNA small subunit methyltransferase A1.4e-3032.04Show/hide
Query:  TLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSS
        T   LN    + +KSLGQ+++ + +I   + AA +V + D V+EIGPG G+LT  +      V+A E D  +  ++DE       +K++NED +K ++ +
Subjt:  TLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSS

Query:  HMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVD
         +    ++        +P K+V+N+P+ I+T I+  +L     F  +V+++Q E A RLV A   T  Y  ++V + + +  E+ F VPRT F PQPNVD
Subjt:  HMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVD

Query:  AAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHIC-----TSLEIERALEDSSLPATSRPEELSLDDFVWLHN
        +A++    ++A         K+ FS V   F  +RK L  +LQ I          IE  L  + +    RPE L+L +F+ L N
Subjt:  AAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHIC-----TSLEIERALEDSSLPATSRPEELSLDDFVWLHN

Q2RME8 Ribosomal RNA small subunit methyltransferase A1.4e-3032Show/hide
Query:  TLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSS
        TL  +  KG +PRKS GQ+++++++I  ++A AA V  GD V+EIGPG G+LT  L      V+A+E D  + A ++E  A  + ++++  D +K     
Subjt:  TLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSS

Query:  HMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVD
         +  +L +    + R    KVV+N+P+ I+T I+  LL      +E+VL++Q E   R++ A     +Y  ++V V +Y++P +  KVPRT F+P+P VD
Subjt:  HMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVD

Query:  AAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHI-CTSLEIERALEDSSLPATSRPEELSLDDF
        + V+    +       V     FF +V +AFN +RK +  +L  +     +I  AL  + +    R E L +++F
Subjt:  AAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHI-CTSLEIERALEDSSLPATSRPEELSLDDF

Q6ME80 Ribosomal RNA small subunit methyltransferase A1.7e-3935.27Show/hide
Query:  LNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMS
        LN  G  P+K L Q+++++ +I  ++  A++V+ G++VLEIGPG GSLT  ++   A V+AVEKD  +A  +      + +L++  ED +   V   + S
Subjt:  LNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMS

Query:  LLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVV
         L+         Q AKV++N+P++++T I+ +++    +FS + +++QEE A R+  A    S+Y    +F+NFYS P   F V R  F+P P VD+A+V
Subjt:  LLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVV

Query:  SFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHN
          +LK+    P     + FF +  +AF  +RKMLR SL+ +    +I  ALE       +RPE LSL+DF+ L++
Subjt:  SFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIERALEDSSLPATSRPEELSLDDFVWLHN

Arabidopsis top hitse value%identityAlignment
AT1G01860.1 Ribosomal RNA adenine dimethylase family protein1.2e-12068.71Show/hide
Query:  SPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLIN
        SP   L    + A +RR T  ++C  +        +PDDYHSTL++LNS+GR PRKSLGQHYMLNS IN+QLA+AA+VKEGD VLEIGPGTGSLTNVLIN
Subjt:  SPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLIN

Query:  SGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALR
         GATVLA+EKD +M  LV ERFA +++ KVL EDFVKCH+ SHM+S+L++  LS   S  AKVVSN+PFNISTD++K LLPMGDIFS+VVLLLQ+EAALR
Subjt:  SGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALR

Query:  LVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIERALEDS
        LVE +LRTSEYRPIN+ +NFYS+PE  F+VPR NFFPQP VDAAVV+FKLK   DYP VSSTK+FFS+VNSAFNGKRKMLRKSLQHI +S +IE+AL  +
Subjt:  LVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIERALEDS

Query:  SLPATSRPEELSLDDFVWLHNLIVKQ
         LPATSRPEEL+LDDFV LHN+I ++
Subjt:  SLPATSRPEELSLDDFVWLHNLIVKQ

AT2G47420.1 Ribosomal RNA adenine dimethylase family protein1.5e-1933.33Show/hide
Query:  KSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFAST---NRLKVLNEDFVKCHVSSHMMSLLKSIE
        KS GQH + N  + + +   A +K  DV+LEIGPGTG+LT  L+ +G  V+AVE DS M   +  RF  T   NRLKV+  D +K  +    +       
Subjt:  KSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFAST---NRLKVLNEDFVKCHVSSHMMSLLKSIE

Query:  LSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQ
                   V+NIP+ IS+ +  +LL     F   V++ Q E A+RLV A    + Y  ++V    Y+      KV + NF P P VD++VV  + ++
Subjt:  LSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQ

Query:  AADYPAVSSTKSFFSMVNSAFNGKRKML
            P V+  K +   +   F  K K L
Subjt:  AADYPAVSSTKSFFSMVNSAFNGKRKML

AT5G66360.1 Ribosomal RNA adenine dimethylase family protein1.2e-1331.33Show/hide
Query:  KSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFAS---TNRLKVLNEDFVKCHVSSHMMSLLKSIE
        KS GQH + N+ I + +  +++++  D VLEIGPGTG+LT  L+ +   V+AVE D  M  ++ +R +     ++L ++ +D +K       +       
Subjt:  KSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFAS---TNRLKVLNEDFVKCHVSSHMMSLLKSIE

Query:  LSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLV
                  VV+NIP+NIS+ ++ +L+   + F    LLLQ+E + RL+
Subjt:  LSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLV

AT5G66360.2 Ribosomal RNA adenine dimethylase family protein9.8e-1928.95Show/hide
Query:  KSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFAS---TNRLKVLNEDFVKCHVSSHMMSLLKSIE
        KS GQH + N+ I + +  +++++  D VLEIGPGTG+LT  L+ +   V+AVE D  M  ++ +R +     ++L ++ +D +K       +       
Subjt:  KSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLTNVLINSGATVLAVEKDSYMAALVDERFAS---TNRLKVLNEDFVKCHVSSHMMSLLKSIE

Query:  LSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQ
                  VV+NIP+NIS+ ++ +L+   + F    LLLQ+E + RL+ A+   S++  + V V   +D +    V +  F P P VD++V+    K+
Subjt:  LSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQ

Query:  AADYPAVSSTKSFFSMVNSAFNGKRKML
            P V + + + +   + F  K K L
Subjt:  AADYPAVSSTKSFFSMVNSAFNGKRKML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCACCGCCACTTCCAAAACTCATCCTCCCGCCAATTTCACCCACGAGCTATAGACGGAGCCCTAAATCATGTTTACCGGCTAGTACTGCCACCGCCGGCGCACG
GCGGGCAACTCCGTTCCTAGCTTGTTCTGCTGCTACTGTAAGAGTTGGAGAAGGAGTGAATCCAGATGATTATCATTCCACTCTAAGAGCTCTCAATTCCAAAGGCCGCA
TGCCCAGAAAATCTCTCGGCCAGCATTATATGTTGAACTCTTCAATTAACGAGCAGCTGGCTGCTGCGGCTAATGTTAAAGAGGGCGATGTTGTATTAGAAATTGGGCCT
GGAACTGGATCGTTAACCAACGTCCTTATTAACTCAGGTGCAACAGTGCTTGCAGTTGAGAAGGATTCATATATGGCTGCTCTAGTAGATGAAAGATTTGCTAGCACAAA
CAGATTGAAGGTCCTGAACGAGGACTTCGTTAAATGTCATGTGAGCTCACATATGATGTCGTTGCTCAAAAGTATTGAGCTGTCTGATTCAAGATCACAACCTGCTAAAG
TTGTCTCCAACATACCTTTCAATATAAGTACAGATATAATTAAACAACTTCTTCCAATGGGAGACATCTTTTCAGAAGTTGTTCTCTTACTCCAGGAGGAGGCAGCTCTA
CGCTTAGTGGAAGCATCTCTGAGGACATCTGAATATCGACCCATCAATGTATTTGTGAATTTTTATTCAGATCCTGAATTGAAATTTAAAGTTCCGAGGACAAACTTTTT
TCCTCAGCCTAATGTTGACGCAGCTGTTGTATCTTTCAAGCTGAAGCAAGCTGCAGACTATCCTGCAGTTTCATCCACCAAAAGTTTCTTCTCAATGGTTAACTCAGCAT
TCAATGGAAAGCGTAAAATGTTAAGAAAATCTCTTCAACACATATGCACATCCCTTGAGATAGAAAGAGCTTTAGAAGATTCTAGCCTTCCCGCAACTTCGAGACCGGAG
GAGCTAAGCTTAGATGATTTTGTTTGGTTGCACAATTTAATAGTCAAACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCACCGCCACTTCCAAAACTCATCCTCCCGCCAATTTCACCCACGAGCTATAGACGGAGCCCTAAATCATGTTTACCGGCTAGTACTGCCACCGCCGGCGCACG
GCGGGCAACTCCGTTCCTAGCTTGTTCTGCTGCTACTGTAAGAGTTGGAGAAGGAGTGAATCCAGATGATTATCATTCCACTCTAAGAGCTCTCAATTCCAAAGGCCGCA
TGCCCAGAAAATCTCTCGGCCAGCATTATATGTTGAACTCTTCAATTAACGAGCAGCTGGCTGCTGCGGCTAATGTTAAAGAGGGCGATGTTGTATTAGAAATTGGGCCT
GGAACTGGATCGTTAACCAACGTCCTTATTAACTCAGGTGCAACAGTGCTTGCAGTTGAGAAGGATTCATATATGGCTGCTCTAGTAGATGAAAGATTTGCTAGCACAAA
CAGATTGAAGGTCCTGAACGAGGACTTCGTTAAATGTCATGTGAGCTCACATATGATGTCGTTGCTCAAAAGTATTGAGCTGTCTGATTCAAGATCACAACCTGCTAAAG
TTGTCTCCAACATACCTTTCAATATAAGTACAGATATAATTAAACAACTTCTTCCAATGGGAGACATCTTTTCAGAAGTTGTTCTCTTACTCCAGGAGGAGGCAGCTCTA
CGCTTAGTGGAAGCATCTCTGAGGACATCTGAATATCGACCCATCAATGTATTTGTGAATTTTTATTCAGATCCTGAATTGAAATTTAAAGTTCCGAGGACAAACTTTTT
TCCTCAGCCTAATGTTGACGCAGCTGTTGTATCTTTCAAGCTGAAGCAAGCTGCAGACTATCCTGCAGTTTCATCCACCAAAAGTTTCTTCTCAATGGTTAACTCAGCAT
TCAATGGAAAGCGTAAAATGTTAAGAAAATCTCTTCAACACATATGCACATCCCTTGAGATAGAAAGAGCTTTAGAAGATTCTAGCCTTCCCGCAACTTCGAGACCGGAG
GAGCTAAGCTTAGATGATTTTGTTTGGTTGCACAATTTAATAGTCAAACAGTAG
Protein sequenceShow/hide protein sequence
MAAPPLPKLILPPISPTSYRRSPKSCLPASTATAGARRATPFLACSAATVRVGEGVNPDDYHSTLRALNSKGRMPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGP
GTGSLTNVLINSGATVLAVEKDSYMAALVDERFASTNRLKVLNEDFVKCHVSSHMMSLLKSIELSDSRSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAAL
RLVEASLRTSEYRPINVFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKQAADYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHICTSLEIERALEDSSLPATSRPE
ELSLDDFVWLHNLIVKQ