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HG10013090 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013090
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRemorin
Genome locationChr01:26780103..26784161
RNA-Seq ExpressionHG10013090
SyntenyHG10013090
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0010033 - response to organic substance (biological process)
GO:1901700 - response to oxygen-containing compound (biological process)
InterPro domainsIPR005516 - Remorin, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582607.1 hypothetical protein SDJN03_22609, partial [Cucurbita argyrosperma subsp. sororia]9.9e-2548.13Show/hide
Query:  MVTAPENSDST----PAPAPPPASVATGVPNDAVEDKNKAVVPVP-------------------------------------------------------
        M TAPE SDST    PAPAP P +VA G P DAVEDK KAVVPVP                                                       
Subjt:  MVTAPENSDST----PAPAPPPASVATGVPNDAVEDKNKAVVPVP-------------------------------------------------------

Query:  -----------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                               E+LEKKK EY EKMKNKVALIHKEAEEKKA VEAQRSEELLKAEETAAKFRATGT+PKK LGCF
Subjt:  -----------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

XP_004133871.1 uncharacterized protein At3g61260 [Cucumis sativus]2.1e-2750.27Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        MVTAPENS STPAP PPPASV  GVP++AVEDK KA+V VP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                           E+LEKKKAEY EKMKNKV LIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK LGCF
Subjt:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

XP_008438060.1 PREDICTED: uncharacterized protein At3g61260 isoform X1 [Cucumis melo]6.6e-2951.37Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        MVTAPENSDSTPAP PPPASV  GVP++AVEDK KA+V VP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                           E+LEKKKAEY EKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK LGCF
Subjt:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

XP_022147299.1 uncharacterized protein At3g61260-like [Momordica charantia]6.2e-2750Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        M TAPE SDS PAP PP ASVATG PND  E+K KAVVPVP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  ------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                          E+LEKKKAEY EKMKNKVALIHKEAEEKKATV AQRSEELLKAEETAAKFRATGTIPKK LGCF
Subjt:  ------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

XP_038884974.1 uncharacterized protein At3g61260-like [Benincasa hispida]4.3e-2851.37Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        MV+APENSDSTPAPAP PASV T VP DA+E+K KA+VPVP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                           E+LEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK LGCF
Subjt:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

TrEMBL top hitse value%identityAlignment
A0A0A0L3M0 Uncharacterized protein1.0e-2750.27Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        MVTAPENS STPAP PPPASV  GVP++AVEDK KA+V VP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                           E+LEKKKAEY EKMKNKV LIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK LGCF
Subjt:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

A0A1S3AV45 uncharacterized protein At3g61260 isoform X13.2e-2951.37Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        MVTAPENSDSTPAP PPPASV  GVP++AVEDK KA+V VP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                           E+LEKKKAEY EKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK LGCF
Subjt:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

A0A5A7U5S1 Remorin8.2e-2542.53Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        MVTAPENSDSTPAP PPPASV  GVP++AVEDK KA+V VP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  ---------------------------------------------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKA
                                                                 E+LEKKKAEY EKMKNKVALIHKEAEEKKATVEAQRSEELLKA
Subjt:  ---------------------------------------------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKA

Query:  EETAAKFRATGTIPKKLLGCF
        EETAAKFRATGTIPKK LGCF
Subjt:  EETAAKFRATGTIPKKLLGCF

A0A5D3D041 Remorin3.2e-2951.37Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        MVTAPENSDSTPAP PPPASV  GVP++AVEDK KA+V VP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                           E+LEKKKAEY EKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK LGCF
Subjt:  -------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

A0A6J1D0L3 uncharacterized protein At3g61260-like3.0e-2750Show/hide
Query:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------
        M TAPE SDS PAP PP ASVATG PND  E+K KAVVPVP                                                           
Subjt:  MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVP-----------------------------------------------------------

Query:  ------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
                          E+LEKKKAEY EKMKNKVALIHKEAEEKKATV AQRSEELLKAEETAAKFRATGTIPKK LGCF
Subjt:  ------------------EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

SwissProt top hitse value%identityAlignment
O80837 Remorin1.3e-1662.2Show/hide
Query:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
        A E+  KA V      + E+LEKKKA+Y EKMKNKVA IHK AEEK+A VEA++ EELLKAEE  AK+RATG +PK   GCF
Subjt:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

P93758 Remorin 4.27.7e-0438.27Show/hide
Query:  SVATGVPNDAVEDKNKAVVPVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK
        +V  G  N+ V   N  +  +  +LE++KA+  EK +N VA   ++AEE++AT EA+R  E+ K  E A   RA G  P K
Subjt:  SVATGVPNDAVEDKNKAVVPVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK

P93788 Remorin6.4e-1976.56Show/hide
Query:  EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
        E+LEKKKAEY EKMKNK+AL+HKEAEEK+A +EA+R E+LLKAEE AAK+RATGT PKK+LG F
Subjt:  EELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

Q9FFA5 Remorin 1.43.2e-1865.82Show/hide
Query:  EDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGC
        E+  KA V      + E+LEKKKAEY E+MKNK+A IHKEAEEK+A +EA+R EE+LKAEE AAK+RATGT PKKL GC
Subjt:  EDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGC

Q9M2D8 Uncharacterized protein At3g612602.5e-1863.41Show/hide
Query:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
        A E+  KA V      + E+LEKKKAEYAE+MKNKVA IHKEAEE++A +EA+R E++LKAEETAAK+RATG +PK   GCF
Subjt:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

Arabidopsis top hitse value%identityAlignment
AT2G45820.1 Remorin family protein9.6e-1862.2Show/hide
Query:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
        A E+  KA V      + E+LEKKKA+Y EKMKNKVA IHK AEEK+A VEA++ EELLKAEE  AK+RATG +PK   GCF
Subjt:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

AT3G48940.1 Remorin family protein3.1e-1659.76Show/hide
Query:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
        A E+  KA V      + E+L KKKA Y E+MKNK+A IHKEAEEK+A  EA+R E++LKAEE AAK+RATGT P KL G F
Subjt:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

AT3G61260.1 Remorin family protein1.7e-1963.41Show/hide
Query:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF
        A E+  KA V      + E+LEKKKAEYAE+MKNKVA IHKEAEE++A +EA+R E++LKAEETAAK+RATG +PK   GCF
Subjt:  AVEDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF

AT5G23750.1 Remorin family protein2.3e-1965.82Show/hide
Query:  EDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGC
        E+  KA V      + E+LEKKKAEY E+MKNK+A IHKEAEEK+A +EA+R EE+LKAEE AAK+RATGT PKKL GC
Subjt:  EDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGC

AT5G23750.2 Remorin family protein2.3e-1965.82Show/hide
Query:  EDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGC
        E+  KA V      + E+LEKKKAEY E+MKNK+A IHKEAEEK+A +EA+R EE+LKAEE AAK+RATGT PKKL GC
Subjt:  EDKNKAVV-----PVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACGGCGCCGGAAAATTCCGATTCTACTCCGGCTCCGGCTCCGCCGCCGGCGTCAGTTGCAACTGGAGTTCCGAACGATGCTGTGGAGGATAAGAATAAAGCTGT
GGTTCCAGTGCCTGAAGAATTGGAGAAGAAAAAGGCTGAATATGCAGAAAAAATGAAGAACAAAGTGGCTTTGATTCACAAAGAAGCAGAAGAAAAAAAGGCAACAGTGG
AAGCACAACGGTCAGAGGAACTGCTAAAGGCAGAGGAAACGGCTGCCAAATTCCGAGCAACTGGAACCATTCCAAAGAAACTTTTGGGATGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAACGGCGCCGGAAAATTCCGATTCTACTCCGGCTCCGGCTCCGCCGCCGGCGTCAGTTGCAACTGGAGTTCCGAACGATGCTGTGGAGGATAAGAATAAAGCTGT
GGTTCCAGTGCCTGAAGAATTGGAGAAGAAAAAGGCTGAATATGCAGAAAAAATGAAGAACAAAGTGGCTTTGATTCACAAAGAAGCAGAAGAAAAAAAGGCAACAGTGG
AAGCACAACGGTCAGAGGAACTGCTAAAGGCAGAGGAAACGGCTGCCAAATTCCGAGCAACTGGAACCATTCCAAAGAAACTTTTGGGATGTTTTTGA
Protein sequenceShow/hide protein sequence
MVTAPENSDSTPAPAPPPASVATGVPNDAVEDKNKAVVPVPEELEKKKAEYAEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKLLGCF