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HG10013136 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013136
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:27189517..27189864
RNA-Seq ExpressionHG10013136
SyntenyHG10013136
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597110.1 hypothetical protein SDJN03_10290, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2159.17Show/hide
Query:  MMEATR-NENDSKEERELREENEGEAIES---------SSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEA
        MME TR NE+D KEE+E+R++++GEA ++          SSSSFL ++NL+FVLLSL+   S+EDSNG  GE  + KE+EA TTYNI RSSV+K+DVIEA
Subjt:  MMEATR-NENDSKEERELREENEGEAIES---------SSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEA

Query:  KHESRRRLPQKSHTTIKDHR
        K E RRR+ Q+ HTTIKDHR
Subjt:  KHESRRRLPQKSHTTIKDHR

KAG7028573.1 hypothetical protein SDJN02_09754, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-1957.14Show/hide
Query:  MEATR-NENDSKEERELREENEGEAIES---------SSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEAK
        ME TR NE+D KEE+E+R++++GEA ++          SSSSFL ++NL+FVLLSL+   S+E+SNG  GE  + KE+EA TTYNI RSSV+K+DVIEAK
Subjt:  MEATR-NENDSKEERELREENEGEAIES---------SSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEAK

Query:  HESRRRLPQKSHTTIKDHR
         E R R+ Q+ HTTIKDHR
Subjt:  HESRRRLPQKSHTTIKDHR

KGN56466.1 hypothetical protein Csa_011060 [Cucumis sativus]5.9e-3170.54Show/hide
Query:  MMEATRNENDSKEERELREE-NEGE-AIESSSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEAKHESRRRL
        M+E   NEND K+++E+RE+ N GE  +ESSSSSSFL DLNL+FV LSLISPN+NEDSN GNG SM+MKE+E STTYNI +SS+RK+DVIEA+HESRR++
Subjt:  MMEATRNENDSKEERELREE-NEGE-AIESSSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEAKHESRRRL

Query:  PQKSHTTIKDHR
        PQ+ HTTIKDHR
Subjt:  PQKSHTTIKDHR

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q3 Uncharacterized protein2.9e-3170.54Show/hide
Query:  MMEATRNENDSKEERELREE-NEGE-AIESSSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEAKHESRRRL
        M+E   NEND K+++E+RE+ N GE  +ESSSSSSFL DLNL+FV LSLISPN+NEDSN GNG SM+MKE+E STTYNI +SS+RK+DVIEA+HESRR++
Subjt:  MMEATRNENDSKEERELREE-NEGE-AIESSSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEAKHESRRRL

Query:  PQKSHTTIKDHR
        PQ+ HTTIKDHR
Subjt:  PQKSHTTIKDHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGCTACGAGAAATGAAAACGATTCTAAAGAAGAACGAGAGTTGAGAGAAGAAAATGAAGGAGAAGCCATAGAATCGAGTTCGAGTTCGTCATTTCTACAAGA
TTTGAACCTTATATTTGTGCTTCTTTCATTGATTTCTCCAAATTCAAATGAAGATTCAAATGGTGGCAATGGCGAATCAATGAGAATGAAAGAACTTGAAGCTAGTACAA
CTTACAATATTCCACGATCAAGTGTAAGAAAACAAGATGTTATTGAAGCCAAGCACGAAAGTCGCCGACGATTACCTCAAAAGTCTCATACAACAATAAAGGATCACAGG
TTCTTCTCTATGTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGCTACGAGAAATGAAAACGATTCTAAAGAAGAACGAGAGTTGAGAGAAGAAAATGAAGGAGAAGCCATAGAATCGAGTTCGAGTTCGTCATTTCTACAAGA
TTTGAACCTTATATTTGTGCTTCTTTCATTGATTTCTCCAAATTCAAATGAAGATTCAAATGGTGGCAATGGCGAATCAATGAGAATGAAAGAACTTGAAGCTAGTACAA
CTTACAATATTCCACGATCAAGTGTAAGAAAACAAGATGTTATTGAAGCCAAGCACGAAAGTCGCCGACGATTACCTCAAAAGTCTCATACAACAATAAAGGATCACAGG
TTCTTCTCTATGTACTAA
Protein sequenceShow/hide protein sequence
MMEATRNENDSKEERELREENEGEAIESSSSSSFLQDLNLIFVLLSLISPNSNEDSNGGNGESMRMKELEASTTYNIPRSSVRKQDVIEAKHESRRRLPQKSHTTIKDHR
FFSMY