; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013196 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013196
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionserine/arginine-rich splicing factor RS31-like
Genome locationChr01:27674922..27679401
RNA-Seq ExpressionHG10013196
SyntenyHG10013196
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR026015 - F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily
IPR029537 - Arginine/serine-rich-splicing factor RSP31/31A
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650222.1 hypothetical protein Csa_011015 [Cucumis sativus]1.2e-19987.14Show/hide
Query:  KTLNPLPFSSSPRRSSSPLLHRRPAAGYAAALVDASQSTGAIHSVAKDVGRFSKLLRGKRIGGILNDPLVGEEEKGRLVREISVKEG-------------
        K+L+PL     PRRSSSPLLHRRPA+GYAAAL+DASQSTG IHSVAKDVGRFSKLLRGKRIG +LNDPLVG+EEKGRLV+EI+VK G             
Subjt:  KTLNPLPFSSSPRRSSSPLLHRRPAAGYAAALVDASQSTGAIHSVAKDVGRFSKLLRGKRIGGILNDPLVGEEEKGRLVREISVKEG-------------

Query:  ----------GLSEFERIYDELCGTEVVMVSSSKKMKEEELFEIGKNVQRLSGAVKVKGFSALFESENLRVRLLVATMRPIFVGNFGYDTRQSELERLFA
                    SEFER+YDELCGTEVVMVSSSKKM+EEEL  I KNVQRLSGA+KVKGFS LFESENL+VR  VATMRPIFVGNFGYDTRQSELERLF+
Subjt:  ----------GLSEFERIYDELCGTEVVMVSSSKKMKEEELFEIGKNVQRLSGAVKVKGFSALFESENLRVRLLVATMRPIFVGNFGYDTRQSELERLFA

Query:  KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNV
        KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNV
Subjt:  KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNV

Query:  RIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFRRRPSPDYGRARSPAYDRYNGPYE
        RIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA GYGRPGDSPYRRSPSPVFRRRPSPDYGRA SPAYDRYNGPYE
Subjt:  RIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFRRRPSPDYGRARSPAYDRYNGPYE

Query:  RRRSPDYGRNRSPEYGGRFR
        RRRSPDYGRNRSPEYGGRFR
Subjt:  RRRSPDYGRNRSPEYGGRFR

KAG6597062.1 Serine/arginine-rich splicing factor RS31, partial [Cucurbita argyrosperma subsp. sororia]2.8e-20172.78Show/hide
Query:  MDTLTTTSVSTLRVPSTLTSSRDLLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTHKTLNPLPF-----SSSPRRSSSPLLHRRPAAGYAAALVDASQST
        MDTL T+SVSTLRVPSTL SSRDLLHLKN +AHLPHRSPSR SNSISKPPNFLSTHKTLNPLPF     SSSPRRSSSPLLHRRPAAGYAAALVDASQ+T
Subjt:  MDTLTTTSVSTLRVPSTLTSSRDLLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTHKTLNPLPF-----SSSPRRSSSPLLHRRPAAGYAAALVDASQST

Query:  GAIHSVAKDVGRFSKLLRGKRIGGILNDPLVGEEEKGRLVREISVKEG-----------------------GLSEFERIYDELCGTEVVMVSSSKKMKEE
        G+IHSVAKDVGRFSK+LR KRIGG LNDP V EEEKGRLVREI+ K G                        LSEFERIYDELCGTEVV+VSS++KM+E+
Subjt:  GAIHSVAKDVGRFSKLLRGKRIGGILNDPLVGEEEKGRLVREISVKEG-----------------------GLSEFERIYDELCGTEVVMVSSSKKMKEE

Query:  ELFEIGKNVQRL------SGAVKVKGFSAL------------------------------------------------------FESENLRVRLLVATMR
        ELF I KNVQRL      +G    +GF  L                                                      FES+NL+ RL+V+TM+
Subjt:  ELFEIGKNVQRL------SGAVKVKGFSAL------------------------------------------------------FESENLRVRLLVATMR

Query:  PIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDP
        PIFVGNFGYDTRQSELER FAKYGRV+RIDMKSGFAFVYFEDERDA+DAIRGLDN+PFG+DRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDP
Subjt:  PIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDP

Query:  IRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRRRP
        I TRVRDIERHFEPYGKVLNVRIRRNF+FVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGDP+D+SPRR  YGRPGDSPYRRSPSP+ RRRP
Subjt:  IRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRRRP

Query:  SPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        SPDYG  RSPAYDRYNGP ERR+SPDY RNRSPEY GR+R
Subjt:  SPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

XP_004133800.1 serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus]2.5e-13398.77Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA GYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

XP_022147391.1 serine/arginine-rich splicing factor RS31-like isoform X1 [Momordica charantia]2.2e-12997.12Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGD-SPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA YGRPGD SPYRRSPSP FR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGD-SPYRRSPSPVFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY GRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

XP_038893478.1 serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida]3.0e-13499.59Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRR

Query:  RPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GGRFR
        RPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY GGRFR
Subjt:  RPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GGRFR

TrEMBL top hitse value%identityAlignment
A0A0A0L8H4 Uncharacterized protein1.2e-13398.77Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA GYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

A0A1S3AUZ7 serine/arginine-rich splicing factor RS31-like isoform X11.2e-13398.77Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA GYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

A0A5D3DBI0 Serine/arginine-rich splicing factor RS31 isoform X21.2e-13398.77Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA GYGRPGDSPYRRSPSPVFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-GYGRPGDSPYRRSPSPVFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

A0A6J1D279 serine/arginine-rich splicing factor RS31-like isoform X11.1e-12997.12Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGD-SPYRRSPSPVFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA YGRPGD SPYRRSPSP FR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGD-SPYRRSPSPVFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY GRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFR

A0A6J1ECU9 serine/arginine-rich splicing factor RS31-like isoform X11.6e-12594.12Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFE+ERDAED+IR LDN+PFGYDRRRLSVEWARGERGR RDGSKSMANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGD +D+SPRRA YGR GDSPYRRSPSPV+ R
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRR

Query:  RPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG
        RPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSP+YG
Subjt:  RPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYG

SwissProt top hitse value%identityAlignment
P92964 Serine/arginine-rich splicing factor RS316.9e-9474.59Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRA---GYGRPGDSPYRRSPSP
        DPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRA---GYGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRARSPAYDRYNGP--YERRRSPDYGRNRSPEYG
           RRPSPDYGRARSP YDRY GP  YERRRSPDYGR RS +YG
Subjt:  VFRRRPSPDYGRARSPAYDRYNGP--YERRRSPDYGRNRSPEYG

P92965 Serine/arginine-rich splicing factor RS401.6e-6958.63Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLF
        M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG---RHRDGS-KSMANQRPTKTLF

Query:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSP
        VINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+    SP R     P     RRSPSP
Subjt:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRARSP--AYDRYNGPYERRRSPDYGRNRSPEYGGRFRR
          R R SPDYGR  SP  AY +       R SPDYGR RSP    + RR
Subjt:  VFRRRPSPDYGRARSP--AYDRYNGPYERRRSPDYGRNRSPEYGGRFRR

P92966 Serine/arginine-rich splicing factor RS419.1e-7058.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV
        M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV
        INFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR    R  D   RRSPSP 
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV

Query:  FRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNR
         R R SPDYGR  SP   +       R SPDYGR R
Subjt:  FRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNR

Q9NEW6 Probable splicing factor, arginine/serine-rich 37.6e-1631.4Show/hide
Query:  IFVGNFGYDTRQSELERLFAKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARG------------ERGRH--------
        ++VGN   D R+ E+E +F KYGR++ +D+KSG    FAFV FED RDAEDA+R  D   + +D RR+ VE+ RG            + G H        
Subjt:  IFVGNFGYDTRQSELERLFAKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARG------------ERGRH--------

Query:  RDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVSVEY-ALRDDGERGDPFDESP
        R G +    QR T    ++   P     +D++ H    G V    + R+    V+F   ED   A+     +K         Y  +R+D   G       
Subjt:  RDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVSVEY-ALRDDGERGDPFDESP

Query:  RRAGYGRPGDSPYRRSPSPVFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSP
           G    G     RS SP   RR SP Y   RS +  R      R RS     +RSP
Subjt:  RRAGYGRPGDSPYRRSPSPVFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSP

Q9ZPX8 Serine/arginine-rich splicing factor RS31A1.6e-9072.43Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFV
        MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV
        INFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R            RRSPSPV
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV

Query:  FRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYG
        +RRRPSPDY R RSP YDRY G  PYERR+SPDYGR RS +YG
Subjt:  FRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYG

Arabidopsis top hitse value%identityAlignment
AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-9172.43Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFV
        MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV
        INFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R            RRSPSPV
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV

Query:  FRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYG
        +RRRPSPDY R RSP YDRY G  PYERR+SPDYGR RS +YG
Subjt:  FRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYG

AT2G46610.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-7570.89Show/hide
Query:  IDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
        + + +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RR
Subjt:  IDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR

Query:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRRRPSPDYGRARSPAYDRYNG--PYERRR
        NFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R            RRSPSPV+RRRPSPDY R RSP YDRY G  PYERR+
Subjt:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRRRPSPDYGRARSPAYDRYNG--PYERRR

Query:  SPDYGRNRSPEYG
        SPDYGR RS +YG
Subjt:  SPDYGRNRSPEYG

AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-9574.59Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF
        MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRA---GYGRPGDSPYRRSPSP
        DPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRRA---GYGRPGDSPYRRSPSP

Query:  VFRRRPSPDYGRARSPAYDRYNGP--YERRRSPDYGRNRSPEYG
           RRPSPDYGRARSP YDRY GP  YERRRSPDYGR RS +YG
Subjt:  VFRRRPSPDYGRARSPAYDRYNGP--YERRRSPDYGRNRSPEYG

AT5G52040.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.5e-7158.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV
        M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV
        INFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR    R  D   RRSPSP 
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV

Query:  FRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNR
         R R SPDYGR  SP   +       R SPDYGR R
Subjt:  FRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNR

AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.5e-7158.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV
        M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV
        INFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR    R  D   RRSPSP 
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPV

Query:  FRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNR
         R R SPDYGR  SP   +       R SPDYGR R
Subjt:  FRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACTTTAACAACAACCTCTGTTTCAACTCTCAGAGTTCCATCAACCCTAACTTCATCTCGCGACCTTCTCCACCTCAAGAATCCCACCGCTCATCTCCCTCATCG
CTCCCCTTCTCGTACATCCAACTCAATCTCAAAACCCCCTAATTTTCTCTCCACTCACAAAACCCTAAATCCCCTCCCGTTTTCCTCCTCCCCCCGCCGCTCCTCTTCTC
CGCTCCTCCACCGCCGCCCCGCCGCAGGATACGCCGCCGCACTCGTCGACGCATCTCAATCCACCGGAGCGATTCACTCAGTGGCGAAGGACGTCGGGAGATTCTCGAAG
CTGCTGAGAGGGAAGCGAATCGGAGGGATTTTGAACGACCCGTTGGTCGGGGAGGAGGAGAAAGGGCGACTGGTGAGGGAAATTTCAGTGAAGGAAGGGGGGTTGAGCGA
ATTCGAGAGGATTTATGATGAGCTTTGTGGAACTGAAGTGGTGATGGTTTCTTCGAGCAAGAAGATGAAGGAAGAGGAGTTGTTTGAGATTGGGAAGAATGTGCAGAGGT
TGAGTGGGGCTGTGAAAGTGAAGGGTTTCTCTGCTCTGTTCGAATCCGAGAATCTGCGAGTGCGATTATTAGTAGCAACGATGAGGCCGATATTTGTTGGAAACTTTGGG
TATGACACCCGGCAATCTGAGCTGGAGCGTTTATTCGCCAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTTTGCCTTTGTTTACTTTGAAGATGAGAGGGA
TGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGAGGTCGTCATCGTGATGGGTCCA
AGTCAATGGCAAATCAGAGGCCAACAAAAACCCTGTTTGTGATCAATTTTGACCCGATTCGGACAAGAGTTCGTGATATTGAAAGACACTTTGAACCTTATGGGAAGGTG
CTCAATGTTCGCATTAGAAGGAACTTTGCATTTGTACAATTTGAGACGCAGGAGGATGCAACTAAAGCCCTTGAGTGTACTCACATGAGCAAAATATTAGACAGGGTTGT
GTCAGTTGAATATGCTTTGAGGGATGACGGTGAGAGGGGTGATCCTTTTGATGAAAGCCCTCGAAGAGCAGGTTATGGGCGACCAGGGGATAGTCCCTACCGGAGGTCAC
CTAGTCCTGTGTTTCGCCGTCGGCCAAGTCCGGACTATGGGCGAGCTCGTAGCCCTGCTTATGATAGGTATAATGGGCCTTATGAACGACGTAGGAGTCCTGATTATGGT
AGGAACCGAAGCCCTGAATATGGTGGTAGATTTCGCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATACTTTAACAACAACCTCTGTTTCAACTCTCAGAGTTCCATCAACCCTAACTTCATCTCGCGACCTTCTCCACCTCAAGAATCCCACCGCTCATCTCCCTCATCG
CTCCCCTTCTCGTACATCCAACTCAATCTCAAAACCCCCTAATTTTCTCTCCACTCACAAAACCCTAAATCCCCTCCCGTTTTCCTCCTCCCCCCGCCGCTCCTCTTCTC
CGCTCCTCCACCGCCGCCCCGCCGCAGGATACGCCGCCGCACTCGTCGACGCATCTCAATCCACCGGAGCGATTCACTCAGTGGCGAAGGACGTCGGGAGATTCTCGAAG
CTGCTGAGAGGGAAGCGAATCGGAGGGATTTTGAACGACCCGTTGGTCGGGGAGGAGGAGAAAGGGCGACTGGTGAGGGAAATTTCAGTGAAGGAAGGGGGGTTGAGCGA
ATTCGAGAGGATTTATGATGAGCTTTGTGGAACTGAAGTGGTGATGGTTTCTTCGAGCAAGAAGATGAAGGAAGAGGAGTTGTTTGAGATTGGGAAGAATGTGCAGAGGT
TGAGTGGGGCTGTGAAAGTGAAGGGTTTCTCTGCTCTGTTCGAATCCGAGAATCTGCGAGTGCGATTATTAGTAGCAACGATGAGGCCGATATTTGTTGGAAACTTTGGG
TATGACACCCGGCAATCTGAGCTGGAGCGTTTATTCGCCAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTTTGCCTTTGTTTACTTTGAAGATGAGAGGGA
TGCTGAAGATGCCATTCGGGGACTTGATAACTTGCCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGGGTGAACGAGGTCGTCATCGTGATGGGTCCA
AGTCAATGGCAAATCAGAGGCCAACAAAAACCCTGTTTGTGATCAATTTTGACCCGATTCGGACAAGAGTTCGTGATATTGAAAGACACTTTGAACCTTATGGGAAGGTG
CTCAATGTTCGCATTAGAAGGAACTTTGCATTTGTACAATTTGAGACGCAGGAGGATGCAACTAAAGCCCTTGAGTGTACTCACATGAGCAAAATATTAGACAGGGTTGT
GTCAGTTGAATATGCTTTGAGGGATGACGGTGAGAGGGGTGATCCTTTTGATGAAAGCCCTCGAAGAGCAGGTTATGGGCGACCAGGGGATAGTCCCTACCGGAGGTCAC
CTAGTCCTGTGTTTCGCCGTCGGCCAAGTCCGGACTATGGGCGAGCTCGTAGCCCTGCTTATGATAGGTATAATGGGCCTTATGAACGACGTAGGAGTCCTGATTATGGT
AGGAACCGAAGCCCTGAATATGGTGGTAGATTTCGCAGGTAA
Protein sequenceShow/hide protein sequence
MDTLTTTSVSTLRVPSTLTSSRDLLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTHKTLNPLPFSSSPRRSSSPLLHRRPAAGYAAALVDASQSTGAIHSVAKDVGRFSK
LLRGKRIGGILNDPLVGEEEKGRLVREISVKEGGLSEFERIYDELCGTEVVMVSSSKKMKEEELFEIGKNVQRLSGAVKVKGFSALFESENLRVRLLVATMRPIFVGNFG
YDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKV
LNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGYGRPGDSPYRRSPSPVFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYG
RNRSPEYGGRFRR