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HG10013259 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013259
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2
Genome locationChr01:28217537..28217794
RNA-Seq ExpressionHG10013259
SyntenyHG10013259
Gene Ontology termsGO:0009723 - response to ethylene (biological process)
GO:0009751 - response to salicylic acid (biological process)
GO:0042742 - defense response to bacterium (biological process)
GO:0043069 - negative regulation of programmed cell death (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048806.1 protein VASCULAR ASSOCIATED DEATH 1 [Cucumis melo var. makuwa]5.0e-2784.34Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQVHTATSL  KFAP  ENY
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY
XP_016899022.1 PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X5 [Cucumis melo]1.0e-1986.36Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQV
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQV
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQV
XP_038874389.1 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X1 [Benincasa hispida]4.5e-2087.69Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++ AAAE IELPRPRDKLP+NLSPDSASCYPPESSS SADRISDTNESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
XP_038874398.1 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Benincasa hispida]4.5e-2087.69Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++ AAAE IELPRPRDKLP+NLSPDSASCYPPESSS SADRISDTNESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
XP_038874406.1 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X3 [Benincasa hispida]4.5e-2087.69Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++ AAAE IELPRPRDKLP+NLSPDSASCYPPESSS SADRISDTNESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
TrEMBL top hitse value%identityAlignment
A0A1S3AUF8 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X31.9e-1986.15Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
A0A1S3AUS4 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X11.9e-1986.15Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
A0A1S4DSQ3 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X54.9e-2086.36Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQV
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQV
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQV
A0A1S4DSQ4 protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X41.9e-1986.15Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQ
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQ
A0A5D3DB36 Protein VASCULAR ASSOCIATED DEATH 12.4e-2784.34Show/hide
Query:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY
        AAA++AAA E IELPRPRDKLP NLSPDSASCYPPESSS SADRISDT+ESS  PDGFHEDVEIQVHTATSL  KFAP  ENY
Subjt:  AAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGCGGCCTCAGCGGCGGCGGCGGCTGAGAGAATTGAACTGCCTCGACCACGGGACAAACTCCCAATGAACCTTTCTCCAGACTCTGCTTCCTGCTACCCCCC
CGAATCATCTTCTTTCTCAGCTGACCGCATATCCGATACCAACGAGTCATCTCCTTTGCCTGACGGTTTCCACGAGGACGTCGAAATTCAGGTACATACTGCCACCTCTC
TCCATTCTAAATTTGCACCCGTTTCCGAGAATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTGCGGCCTCAGCGGCGGCGGCGGCTGAGAGAATTGAACTGCCTCGACCACGGGACAAACTCCCAATGAACCTTTCTCCAGACTCTGCTTCCTGCTACCCCCC
CGAATCATCTTCTTTCTCAGCTGACCGCATATCCGATACCAACGAGTCATCTCCTTTGCCTGACGGTTTCCACGAGGACGTCGAAATTCAGGTACATACTGCCACCTCTC
TCCATTCTAAATTTGCACCCGTTTCCGAGAATTATTGA
Protein sequenceShow/hide protein sequence
MAAAASAAAAAERIELPRPRDKLPMNLSPDSASCYPPESSSFSADRISDTNESSPLPDGFHEDVEIQVHTATSLHSKFAPVSENY