; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013262 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013262
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionethylene-responsive transcription factor 13-like
Genome locationChr01:28253530..28253985
RNA-Seq ExpressionHG10013262
SyntenyHG10013262
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3439383.1 hypothetical protein FNV43_RR17660 [Rhamnella rubrinervis]1.8e-2746.2Show/hide
Query:  SSWRESD--VLESIRQHLLEE-------------------NNSGSGDGDGRESTA----------IIIQHHKKETAAENGVQVQL--LQFKGVRRRPWGK
        SS  ESD  +LESIRQHLL +                   N++ +    GR S+           I++     + A  + V V++  ++++GVRRRPWGK
Subjt:  SSWRESD--VLESIRQHLLEE-------------------NNSGSGDGDGRESTA----------IIIQHHKKETAAENGVQVQL--LQFKGVRRRPWGK

Query:  YAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDS-DSIWSTSTSASTKRPPSPTHAQHQTSASKRR
        YAAEIRDPK+NG+R WLGT++TAEDAALAYD+AAFK+RGAKAKLNFPHLI S  S+   STS+S+   PSP+ +  +T    +R
Subjt:  YAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDS-DSIWSTSTSASTKRPPSPTHAQHQTSASKRR

XP_004134276.1 ethylene-responsive transcription factor 13 [Cucumis sativus]2.6e-5077.03Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR
        MSSWRESDVL+SIRQHLLEEN + SGDG      +II  HH K  A ENGV     QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TA +AALAYDR
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR

Query:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKR-PPSPTHAQHQTSA
        AAFKIRGAKAKLNFPHLIDSDS  STS S S+   PPSPTHA HQTSA
Subjt:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKR-PPSPTHAQHQTSA

XP_008439349.1 PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo]3.4e-5076.39Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR
        MSSWRESDVLESIRQHLL+EN + SGDGDG    +II  HH K  A E        +FKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TA++AALAYDR
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR

Query:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTS-ASTKRPPSPTHAQH
        AAFKIRGAKAKLNFPHLIDS S +STS S +STKRPPSPTHA H
Subjt:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTS-ASTKRPPSPTHAQH

XP_022151925.1 ethylene-responsive transcription factor 14-like [Momordica charantia]2.2e-3361.9Show/hide
Query:  DVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKET---AAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFK
        D+LE IR+HLLEE      D     + A    +   E     +E GV VQ  QFKGVRRRPWGKYAAEIRDP R GARTWLGTF TAEDAALAYDRAAFK
Subjt:  DVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKET---AAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFK

Query:  IRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKRR
        +RGAKAKLNFPHLIDS+S   +    + KRP  PT   HQTS S+RR
Subjt:  IRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKRR

XP_038907088.1 ethylene-responsive transcription factor 13-like [Benincasa hispida]8.5e-6284.18Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGDGDG---RESTAIIIQHHKK----ETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAED
        MSSWRESDVLESIRQHLLEENNSG GDGDG     S+AI I HH K      AAENG  VQL+QFKGVRRRPWGKYA EIRDPKRNGARTWLGTFDTA+D
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGDGDG---RESTAIIIQHHKK----ETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAED

Query:  AALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKRR
        AALAYDRAAF+IRGAKAKLNFPHLIDSDSIWSTST  STKRP SPTHAQHQTSASKRR
Subjt:  AALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2V9 AP2/ERF domain-containing protein1.2e-5077.03Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR
        MSSWRESDVL+SIRQHLLEEN + SGDG      +II  HH K  A ENGV     QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TA +AALAYDR
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR

Query:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKR-PPSPTHAQHQTSA
        AAFKIRGAKAKLNFPHLIDSDS  STS S S+   PPSPTHA HQTSA
Subjt:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKR-PPSPTHAQHQTSA

A0A1S3AZ89 ethylene-responsive transcription factor 13-like1.6e-5076.39Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR
        MSSWRESDVLESIRQHLL+EN + SGDGDG    +II  HH K  A E        +FKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TA++AALAYDR
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR

Query:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTS-ASTKRPPSPTHAQH
        AAFKIRGAKAKLNFPHLIDS S +STS S +STKRPPSPTHA H
Subjt:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTS-ASTKRPPSPTHAQH

A0A5A7TYW8 Ethylene-responsive transcription factor 13-like1.6e-5076.39Show/hide
Query:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR
        MSSWRESDVLESIRQHLL+EN + SGDGDG    +II  HH K  A E        +FKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+TA++AALAYDR
Subjt:  MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDR

Query:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTS-ASTKRPPSPTHAQH
        AAFKIRGAKAKLNFPHLIDS S +STS S +STKRPPSPTHA H
Subjt:  AAFKIRGAKAKLNFPHLIDSDSIWSTSTS-ASTKRPPSPTHAQH

A0A6J1DCJ3 ethylene-responsive transcription factor 14-like1.1e-3361.9Show/hide
Query:  DVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKET---AAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFK
        D+LE IR+HLLEE      D     + A    +   E     +E GV VQ  QFKGVRRRPWGKYAAEIRDP R GARTWLGTF TAEDAALAYDRAAFK
Subjt:  DVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKET---AAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFK

Query:  IRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKRR
        +RGAKAKLNFPHLIDS+S   +    + KRP  PT   HQTS S+RR
Subjt:  IRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKRR

B9MV98 AP2/ERF domain-containing protein2.1e-2672.94Show/hide
Query:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKR-PPSPT
        LQ+KGVRRRPWGKYAAEIRDPK+NGAR WLGT++T EDAALAYDRAAFK+RG+KAKLNFPHLI S++ W  +   S KR  P P+
Subjt:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKR-PPSPT

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI54.0e-2273.13Show/hide
Query:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDSI
        +++GVRRRPWGKYAAEIRD  R+GAR WLGTF+TAE+AALAYDRAAF++RGAKA LNFP  I + S+
Subjt:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDSI

O80337 Ethylene-responsive transcription factor 1A5.3e-2273.02Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDS
        ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TAEDAALAYDRAAF++RG++A LNFP  ++S
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDS

O80338 Ethylene-responsive transcription factor 27.6e-2151.92Show/hide
Query:  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDS-----IWSTSTSASTKRPPSPTHAQHQTSA
        V+   ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TAEDAALAYD AAF++RG++A LNFP  ++S       I S  +S+S+    S T +      
Subjt:  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDS-----IWSTSTSASTKRPPSPTHAQHQTSA

Query:  SKRR
         +RR
Subjt:  SKRR

Q40476 Ethylene-responsive transcription factor 11.8e-2242.31Show/hide
Query:  NSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSD
        N  +G+    +    I+    + TAA      +   ++GVRRRPWGK+AAEIRDP +NGAR WLGT++T E+AA+AYD+AA+++RG+KA LNFPH I  +
Subjt:  NSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSD

Query:  SIWSTSTSASTKRPPSPTHAQHQTSASKRR
               +A  +  P P  +   +S  +RR
Subjt:  SIWSTSTSASTKRPPSPTHAQHQTSASKRR

Q8L9K1 Ethylene-responsive transcription factor 131.7e-2561.05Show/hide
Query:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKR
        +Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT++T EDAA+AYDRAAF++RG+KAKLNFPHLI S   +        +R P P+ +   TS  KR
Subjt:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKR

Arabidopsis top hitse value%identityAlignment
AT2G44840.1 ethylene-responsive element binding factor 131.2e-2661.05Show/hide
Query:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKR
        +Q++GVRRRPWGK+AAEIRDPK+NGAR WLGT++T EDAA+AYDRAAF++RG+KAKLNFPHLI S   +        +R P P+ +   TS  KR
Subjt:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKR

AT3G23220.1 Integrase-type DNA-binding superfamily protein9.2e-2273.77Show/hide
Query:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPH
        ++++GVR+RPWGKYAAEIRD  R+GAR WLGTF+TAEDAA AYDRAAF +RG +A LNFPH
Subjt:  LQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPH

AT3G23230.1 Integrase-type DNA-binding superfamily protein7.0e-2276.67Show/hide
Query:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPH
        +F+GVRRRPWGK+AAEIRDP RNGAR WLGTF+TAE+AA AYDRAAF +RG  A LNFP+
Subjt:  QFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPH

AT4G17500.1 ethylene responsive element binding factor 13.7e-2373.02Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDS
        ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TAEDAALAYDRAAF++RG++A LNFP  ++S
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDS

AT5G47220.1 ethylene responsive element binding factor 25.4e-2251.92Show/hide
Query:  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDS-----IWSTSTSASTKRPPSPTHAQHQTSA
        V+   ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+TAEDAALAYD AAF++RG++A LNFP  ++S       I S  +S+S+    S T +      
Subjt:  VQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKAKLNFPHLIDSDS-----IWSTSTSASTKRPPSPTHAQHQTSA

Query:  SKRR
         +RR
Subjt:  SKRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGGATGGGGATGGCCGGGAATCAACTGCAATTAT
TATTCAGCATCATAAGAAGGAGACGGCGGCGGAGAATGGAGTGCAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCA
GAGATCCAAAGAGAAACGGAGCCAGAACGTGGCTGGGGACGTTTGACACGGCCGAAGACGCAGCTTTGGCGTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCG
AAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCTACTTCCACTTCTGCTTCTACTAAGCGTCCTCCAAGTCCTACACATGCCCAGCATCAAACTTCTGC
TTCAAAACGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGTGGAGGGAGTCGGATGTGTTGGAGTCGATCCGTCAACATCTTCTGGAAGAAAATAACAGTGGGAGTGGGGATGGGGATGGCCGGGAATCAACTGCAATTAT
TATTCAGCATCATAAGAAGGAGACGGCGGCGGAGAATGGAGTGCAAGTGCAACTACTGCAATTCAAGGGAGTGAGGCGGAGGCCATGGGGGAAATACGCGGCGGAGATCA
GAGATCCAAAGAGAAACGGAGCCAGAACGTGGCTGGGGACGTTTGACACGGCCGAAGACGCAGCTTTGGCGTACGATCGAGCGGCTTTCAAAATCCGAGGAGCTAAGGCG
AAGCTCAACTTTCCGCATCTCATTGATTCTGATTCTATTTGGTCTACTTCCACTTCTGCTTCTACTAAGCGTCCTCCAAGTCCTACACATGCCCAGCATCAAACTTCTGC
TTCAAAACGCCGCTGA
Protein sequenceShow/hide protein sequence
MSSWRESDVLESIRQHLLEENNSGSGDGDGRESTAIIIQHHKKETAAENGVQVQLLQFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTAEDAALAYDRAAFKIRGAKA
KLNFPHLIDSDSIWSTSTSASTKRPPSPTHAQHQTSASKRR