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HG10013265 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013265
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscription factor 25
Genome locationChr01:28275078..28275746
RNA-Seq ExpressionHG10013265
SyntenyHG10013265
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597002.1 Transcription factor 25, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1990.48Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEEL+QH+SQ STT  EDGQDPGPS PAASSINPFDLLIDDEDDSQINPQQ
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
KAG7028469.1 Transcription factor 25 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1990.48Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEEL+QH+SQ STT  EDGQDPGPS PAASSINPFDLLIDDEDDSQINPQQ
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
XP_022935196.1 transcription factor 25 [Cucurbita moschata]2.3e-1990.48Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEEL+QH+SQ STT  EDGQDPGPS PAASSINPFDLLIDDEDDSQINPQQ
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
XP_022974270.1 transcription factor 25 [Cucurbita maxima]2.3e-1990.48Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEEL+QH+SQ STT  EDGQDPGPS PAASSINPFDLLIDDEDDSQINPQQ
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
XP_038893357.1 transcription factor 25 [Benincasa hispida]9.4e-2195.08Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTTEDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEEL QHYSQSSTTED QDPGPSSPAASSINPFDLLIDDEDDSQI+PQQ
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTTEDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
TrEMBL top hitse value%identityAlignment
A0A0A0L889 Uncharacterized protein3.6e-1887.3Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTTEDGQD--PGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEELRQHYSQSST EDG D   GPSSP ASSINPFDLLIDDEDDSQI+P Q
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTTEDGQD--PGPSSPAASSINPFDLLIDDEDDSQINPQQ
A0A1S3AUW3 LOW QUALITY PROTEIN: transcription factor 257.2e-1988.89Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTTEDGQD--PGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEELRQHYSQSSTTEDGQD   GPSSP ASSINPFDLLID+EDDSQI+P Q
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTTEDGQD--PGPSSPAASSINPFDLLIDDEDDSQINPQQ
A0A5A7U072 Transcription factor 257.2e-1988.89Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTTEDGQD--PGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEELRQHYSQSSTTEDGQD   GPSSP ASSINPFDLLID+EDDSQI+P Q
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTTEDGQD--PGPSSPAASSINPFDLLIDDEDDSQINPQQ
A0A6J1F3V8 transcription factor 251.1e-1990.48Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEEL+QH+SQ STT  EDGQDPGPS PAASSINPFDLLIDDEDDSQINPQQ
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
A0A6J1IDI7 transcription factor 251.1e-1990.48Show/hide
Query:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
        MSARLLKKVLKEQEEL+QH+SQ STT  EDGQDPGPS PAASSINPFDLLIDDEDDSQINPQQ
Subjt:  MSARLLKKVLKEQEELRQHYSQSSTT--EDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46900.1 CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix, Nulp1-type (InterPro:IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species: Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (source: NCBI BLink).2.2e-0448.39Show/hide
Query:  MSARLLKKVLKEQEELR-QHYSQSSTTEDGQDPGPSSPAASSINPFDLLID-DEDDSQINPQ
        MS RLLKKVL+E E+ + Q + +    ED ++ G    A SSINPFDLL D DED  +I+ +
Subjt:  MSARLLKKVLKEQEELR-QHYSQSSTTEDGQDPGPSSPAASSINPFDLLID-DEDDSQINPQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCTCGGCTGCTGAAAAAGGTCTTAAAGGAACAGGAGGAGCTACGACAGCACTATTCTCAATCCTCCACCACTGAAGACGGACAGGATCCTGGGCCATCGTCACC
TGCTGCTTCTTCTATCAATCCCTTCGATCTCCTTATCGACGACGAAGATGACTCCCAAATTAACCCTCAACAGAAGCACACATTCATTGAAAATGATGAATTCTGGCTTG
CATTTATCTTATGTGTTAAACATACAGAAAGAACAAGGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCTCGGCTGCTGAAAAAGGTCTTAAAGGAACAGGAGGAGCTACGACAGCACTATTCTCAATCCTCCACCACTGAAGACGGACAGGATCCTGGGCCATCGTCACC
TGCTGCTTCTTCTATCAATCCCTTCGATCTCCTTATCGACGACGAAGATGACTCCCAAATTAACCCTCAACAGAAGCACACATTCATTGAAAATGATGAATTCTGGCTTG
CATTTATCTTATGTGTTAAACATACAGAAAGAACAAGGATTTAA
Protein sequenceShow/hide protein sequence
MSARLLKKVLKEQEELRQHYSQSSTTEDGQDPGPSSPAASSINPFDLLIDDEDDSQINPQQKHTFIENDEFWLAFILCVKHTERTRI