; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013287 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013287
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr02:107152..117096
RNA-Seq ExpressionHG10013287
SyntenyHG10013287
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064677.1 chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo var. makuwa]4.6e-16293.2Show/hide
Query:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF
        MAL+QPHT AS+ISSSS SF+G  L QLR  TTTLN R++HSI HRSTCRASWQELAGVLIFSA+PFTAVK+IANSPLG+SLQRQLEKKKKSAVANSSKF
Subjt:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARK+SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
        SKLK  TLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG

Query:  FYSQAALTG
        FYSQAALTG
Subjt:  FYSQAALTG

XP_004145567.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Cucumis sativus]1.8e-16193.2Show/hide
Query:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF
        MALVQPHT AS+ISSSS S  G  L Q R  TTTLN R++HSI HRSTCRASWQELAGVLIFSAIPFTAVK+IANSPLG SLQRQLEKKK SAVANSSKF
Subjt:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARK+SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQK+FNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
        SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG

Query:  FYSQAALTG
        FYSQAALTG
Subjt:  FYSQAALTG

XP_008453032.2 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 isoform X1 [Cucumis melo]3.8e-16493.25Show/hide
Query:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS
        + MAL+QPHT AS+ISSSS SF+G  L QLR  TTTLN R++HSI HRSTCRASWQELAGVLIFSA+PFTAVK+IANSPLG+SLQRQLEKKKKSAVANSS
Subjt:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS

Query:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
        KFKALAEEARK+SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
Subjt:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV

Query:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
        GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
Subjt:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW

Query:  LGFYSQAALTG
        LGFYSQAALTG
Subjt:  LGFYSQAALTG

XP_023521109.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita pepo subsp. pepo]3.0e-16192.28Show/hide
Query:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS
        M MAL QPHTS SAISSSS SF+G+SL QLRSRT  LN RNS SIPHR TC ASWQELAGVLIFSAIPFTAVK+IANSP G+SLQRQLEKKK +AVA SS
Subjt:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS

Query:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
        KFKALAEEARK+SSWYGE+RPRWLGPLPY+YPKYLTGELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
Subjt:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV

Query:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
        GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
Subjt:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW

Query:  LGFYSQAALTG
        LGFYSQAALTG
Subjt:  LGFYSQAALTG

XP_038898449.1 chlorophyll a-b binding protein 7, chloroplastic isoform X1 [Benincasa hispida]1.3e-16493.89Show/hide
Query:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS
        MAMALVQPHT   AISSSS SF+G+SL +LRSRT TLN RN HSIPHRSTCRASWQELAGVLIFSAIPFTAVK+IANSPLG+SLQRQLEKKKKSA+ANSS
Subjt:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS

Query:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
        KFK LAEEARK+SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
Subjt:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV

Query:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
        GYSKLKGDTLDYLGIPGLHLAGSQGV+VIAICQAILMVGPEYAR+CGIEALEPLGI+LPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
Subjt:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW

Query:  LGFYSQAALTG
        LGFYSQAALTG
Subjt:  LGFYSQAALTG

TrEMBL top hitse value%identityAlignment
A0A1S3BWE1 Chlorophyll a-b binding protein, chloroplastic1.8e-16493.25Show/hide
Query:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS
        + MAL+QPHT AS+ISSSS SF+G  L QLR  TTTLN R++HSI HRSTCRASWQELAGVLIFSA+PFTAVK+IANSPLG+SLQRQLEKKKKSAVANSS
Subjt:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS

Query:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
        KFKALAEEARK+SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
Subjt:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV

Query:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
        GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
Subjt:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW

Query:  LGFYSQAALTG
        LGFYSQAALTG
Subjt:  LGFYSQAALTG

A0A5A7VCG1 Chlorophyll a-b binding protein, chloroplastic2.2e-16293.2Show/hide
Query:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF
        MAL+QPHT AS+ISSSS SF+G  L QLR  TTTLN R++HSI HRSTCRASWQELAGVLIFSA+PFTAVK+IANSPLG+SLQRQLEKKKKSAVANSSKF
Subjt:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KALAEEARK+SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
Subjt:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
        SKLK  TLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG

Query:  FYSQAALTG
        FYSQAALTG
Subjt:  FYSQAALTG

A0A6J1CK83 Chlorophyll a-b binding protein, chloroplastic1.2e-15588.1Show/hide
Query:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS
        MAMA++QPHTS SAI SSS SF+G+SL Q R      N RNS S+P+RSTC+ASWQELAGVLIFSAIPFTAVK+IANSPLG+SLQRQ+EKKK++A+ANSS
Subjt:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS

Query:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
        KFKALA EARK+SSWYGEERPRWLGP+PY+YPKYLTG+LPGDYGFDIAGLS+DPVAFQKYFNFEILHARWAMLASLGAL+PEILDI GAFHF+EPIWWRV
Subjt:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV

Query:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
        GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQ ILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
Subjt:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW

Query:  LGFYSQAALTG
        LGFYSQAALTG
Subjt:  LGFYSQAALTG

A0A6J1FCV0 Chlorophyll a-b binding protein, chloroplastic3.2e-16191.96Show/hide
Query:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS
        M MAL QPHTS SAISSSS SF+G+SL QLRSRT  LN RNS SIPHR TC ASWQELAGVLIFSAIPFTAVK+IANSP G+SLQRQLEKKK +AVA SS
Subjt:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS

Query:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
        KFKALAE+ARK+SSWYGE+RPRWLGPLPY+YPKYLTGELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
Subjt:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV

Query:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
        GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
Subjt:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW

Query:  LGFYSQAALTG
        LGFYSQAALTG
Subjt:  LGFYSQAALTG

A0A6J1IGJ6 Chlorophyll a-b binding protein, chloroplastic6.1e-16090.68Show/hide
Query:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS
        M MAL  PHTS SA+SSSS SF+G+SL QLRSRT  LN RNS SIPHR TC ASWQELAG+LIFSAIPFTAVK+IANSP G+SLQRQLEKKK +AVA SS
Subjt:  MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSS

Query:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
        KFKALAE+ARK+SSWYGE+RPRWLGPLPY+YPKYLTGELPGDYGFDIAGLSEDPVAF+KYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV
Subjt:  KFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRV

Query:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW
        GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYAR+CGIEALEPLGIYLPGDINYPGGVLFDPLNLS+DAAAFEELKVKEIKNGRLAMVAW
Subjt:  GYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAW

Query:  LGFYSQAALTG
        LGFYSQAALTG
Subjt:  LGFYSQAALTG

SwissProt top hitse value%identityAlignment
P07370 Chlorophyll a-b binding protein 1B, chloroplastic1.4e-4448.33Show/hide
Query:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        KA+A+ A   S WYG +R ++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H RWAML +LG + PE+L   G   F E +W++ G 
Subjt:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
               LDYLG P   L  +Q ++ I  CQ +LM   E  R  G     PLG  +  D  YPGG  FDPL L++D  AF ELKVKEIKNGRLAM +  G
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG

Query:  FYSQAALTG
        F+ QA +TG
Subjt:  FYSQAALTG

P14278 Chlorophyll a-b binding protein 4, chloroplastic3.1e-4450Show/hide
Query:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD
        +S WYGE+RP++LGP     P YLTGE PGDYG+D AGLS DP  F +    E++H RWAML +LG + PEIL   G   F E +W++ G        LD
Subjt:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD

Query:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG
        YLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPL L+ D  AF ELKVKEIKNGRLAM +  GF+ QA +TG
Subjt:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG

P22686 Chlorophyll a-b binding protein of LHCII type I, chloroplastic9.0e-4444.78Show/hide
Query:  KSLQRQLEKKKKSAVANSSKFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVP
        ++L  ++E  KK+A    +K  A A+ A  E  WYG +R +WLGP   + P YLTGE PGDYG+D AGLS DP  F+KY   E++HARWA+L +LG L P
Subjt:  KSLQRQLEKKKKSAVANSSKFKALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVP

Query:  EILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA
        E+L  +    F EP+W++ G        LDYLG P   L  +Q ++     Q +LM   E  R  G  A E L    PG+        FDPL L+ D   
Subjt:  EILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAA

Query:  FEELKVKEIKNGRLAMVAWLGFYSQAALTG
        F ELKVKEIKNGRLAM +  GF+ QA +TG
Subjt:  FEELKVKEIKNGRLAMVAWLGFYSQAALTG

Q9C9K1 Chlorophyll a-b binding protein 7, chloroplastic2.0e-12872.49Show/hide
Query:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF
        MAL Q     S++SSS  S H    + +      +    S     RS CRASWQELAGVL+FSAIPFTAVK+IANS +G SL+R+LE+KKK AV NSS+F
Subjt:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        K+ A+EAR +S WYG+ERPRW GP+PYDYP YLTGELPGDYGFDIAGL +D + F KYFNFEILHARWAMLA+LGAL+PE+ D+ G FHF EP+WWRVGY
Subjt:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
        SKL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYAR+CGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLG
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG

Query:  FYSQAALTG
        FY+QAA TG
Subjt:  FYSQAALTG

Q9XF87 Chlorophyll a-b binding protein 2.4, chloroplastic1.8e-4450Show/hide
Query:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD
        +S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LD
Subjt:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD

Query:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG
        YLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TG
Subjt:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG

Arabidopsis top hitse value%identityAlignment
AT1G76570.1 Chlorophyll A-B binding family protein1.4e-12972.49Show/hide
Query:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF
        MAL Q     S++SSS  S H    + +      +    S     RS CRASWQELAGVL+FSAIPFTAVK+IANS +G SL+R+LE+KKK AV NSS+F
Subjt:  MALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKF

Query:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY
        K+ A+EAR +S WYG+ERPRW GP+PYDYP YLTGELPGDYGFDIAGL +D + F KYFNFEILHARWAMLA+LGAL+PE+ D+ G FHF EP+WWRVGY
Subjt:  KALAEEARKESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGY

Query:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG
        SKL+G+TL+YLGIPGLH+AGSQGVIVIAICQ +LMVGPEYAR+CGIEALEPLGIYLPGDINYPGG LFDPLNLS+D  AFE+LKVKEIKNGRLAMVAWLG
Subjt:  SKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLG

Query:  FYSQAALTG
        FY+QAA TG
Subjt:  FYSQAALTG

AT2G05070.1 photosystem II light harvesting complex gene 2.21.9e-4449.5Show/hide
Query:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD
        +S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LD
Subjt:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD

Query:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG
        YLG P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TG
Subjt:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG

AT2G05100.1 photosystem II light harvesting complex gene 2.11.9e-4449.5Show/hide
Query:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD
        +S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LD
Subjt:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD

Query:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG
        YLG P  +L  +Q ++ I   Q +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TG
Subjt:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG

AT3G27690.1 photosystem II light harvesting complex gene 2.31.3e-4550Show/hide
Query:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD
        +S WYG +RP++LGP   + P YLTGE PGDYG+D AGLS DP  F K    E++H+RWAML +LG   PEIL   G   F E +W++ G        LD
Subjt:  ESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLD

Query:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG
        YLG P  +L  +Q ++ I  CQ +LM   E  R  G     PLG  L  D  YPGG  FDPLNL++D  AF ELKVKE+KNGRLAM +  GF+ QA +TG
Subjt:  YLGIPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG

AT5G54270.1 light-harvesting chlorophyll B-binding protein 31.1e-4446.19Show/hide
Query:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG
        WYG +R ++LGP     P YLTGE PGDYG+D AGLS DP AF K    E++H RWAML + G + PE+L  +    F EP+W++ G        LDYLG
Subjt:  WYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG

Query:  IPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG
         P  +L  +Q ++ +   Q ILM   E  R  G++ +        G+  YPGG  FDPL L+ D   F ELKVKEIKNGRLAM +  GF+ QA +TG
Subjt:  IPGLHLAGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCGCTAGTTCAGCCACACACTTCAGCTTCTGCAATTTCGTCTTCCTCCGGCTCCTTCCACGGAAATTCTCTTCTGCAACTCCGTTCGCGGACCACAACTCT
TAATTTTCGAAACAGCCACTCTATCCCTCATCGTTCCACTTGCAGAGCTTCCTGGCAAGAGCTTGCAGGGGTTCTGATATTCTCTGCAATTCCTTTCACGGCGGTGAAAT
CCATCGCCAATAGCCCACTTGGAAAGTCGCTCCAGAGACAACTGGAAAAGAAGAAAAAATCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAGGCTAGA
AAAGAGAGCTCATGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATAT
TGCAGGTTTGAGTGAGGATCCTGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGTGCTTTAGTTCCAGAGATCT
TAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATTTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTA
GCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCCGAATATGCAAGATTTTGTGGCATTGAGGCATTGGAGCCTCTGGGAATATA
TCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAATGGGC
GTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGGAACCGAAGGCATAGGGCAGGATGCATTTTTGAGGGTGCTGGACCTTCTGGTGAAGGT
GAGGGCGAGCCTAGTAATGTAATCCATCCCCAACCCGGTTCCTTCCTTCTCATTTGTATTGCTCGAGGCCCTCTTGCAATTGTGAATTGTCGTTGTATTGTGATATTCAT
GACATCCCCTGGCCTTTCTTCCTTGTTAAAGCATTTCAATTTGGCGTTGTTTTCATACAACTTGGAGAAGGACTTGTTGGGTTGCAATGGAGCCAAGGGTAGGCCTACTG
GTACTCTGTACTCTAGCTTTTTATGGAATGACTATAGTAATCCCTCCAGTGGTCACACACAGCCACAGGCTTCTAAGTCAACTTATGTATATGGATTGGATCCAGCCAAT
TGGGAACTGGATCTGAATGCGAGCCAACCTAGGCTTCTGTTTGACGATGGATTTGGATGGATGGATGCAGAGAGAGAAGGATCTCAAATATGTATAATTATTGAAGTTAG
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCGCTAGTTCAGCCACACACTTCAGCTTCTGCAATTTCGTCTTCCTCCGGCTCCTTCCACGGAAATTCTCTTCTGCAACTCCGTTCGCGGACCACAACTCT
TAATTTTCGAAACAGCCACTCTATCCCTCATCGTTCCACTTGCAGAGCTTCCTGGCAAGAGCTTGCAGGGGTTCTGATATTCTCTGCAATTCCTTTCACGGCGGTGAAAT
CCATCGCCAATAGCCCACTTGGAAAGTCGCTCCAGAGACAACTGGAAAAGAAGAAAAAATCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAGGCTAGA
AAAGAGAGCTCATGGTATGGAGAAGAGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATAT
TGCAGGTTTGAGTGAGGATCCTGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGTGCTTTAGTTCCAGAGATCT
TAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATTTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTA
GCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCCGAATATGCAAGATTTTGTGGCATTGAGGCATTGGAGCCTCTGGGAATATA
TCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAATGGGC
GTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGGAACCGAAGGCATAGGGCAGGATGCATTTTTGAGGGTGCTGGACCTTCTGGTGAAGGT
GAGGGCGAGCCTAGTAATGTAATCCATCCCCAACCCGGTTCCTTCCTTCTCATTTGTATTGCTCGAGGCCCTCTTGCAATTGTGAATTGTCGTTGTATTGTGATATTCAT
GACATCCCCTGGCCTTTCTTCCTTGTTAAAGCATTTCAATTTGGCGTTGTTTTCATACAACTTGGAGAAGGACTTGTTGGGTTGCAATGGAGCCAAGGGTAGGCCTACTG
GTACTCTGTACTCTAGCTTTTTATGGAATGACTATAGTAATCCCTCCAGTGGTCACACACAGCCACAGGCTTCTAAGTCAACTTATGTATATGGATTGGATCCAGCCAAT
TGGGAACTGGATCTGAATGCGAGCCAACCTAGGCTTCTGTTTGACGATGGATTTGGATGGATGGATGCAGAGAGAGAAGGATCTCAAATATGTATAATTATTGAAGTTAG
TTAG
Protein sequenceShow/hide protein sequence
MAMALVQPHTSASAISSSSGSFHGNSLLQLRSRTTTLNFRNSHSIPHRSTCRASWQELAGVLIFSAIPFTAVKSIANSPLGKSLQRQLEKKKKSAVANSSKFKALAEEAR
KESSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHL
AGSQGVIVIAICQAILMVGPEYARFCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGNRRHRAGCIFEGAGPSGEG
EGEPSNVIHPQPGSFLLICIARGPLAIVNCRCIVIFMTSPGLSSLLKHFNLALFSYNLEKDLLGCNGAKGRPTGTLYSSFLWNDYSNPSSGHTQPQASKSTYVYGLDPAN
WELDLNASQPRLLFDDGFGWMDAEREGSQICIIIEVS