; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013302 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013302
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L22-2
Genome locationChr02:205823..206275
RNA-Seq ExpressionHG10013302
SyntenyHG10013302
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]6.8e-3571.31Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKGV F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG+SV VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYELR+F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

XP_022960081.1 60S ribosomal protein L22-2-like [Cucurbita moschata]3.4e-3470.49Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKG  F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG+SV VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYELR+F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]3.4e-3469.67Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKGV F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG++V VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYEL++F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

XP_023514139.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]1.7e-3370.34Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKG  F+I C KPVEDKIMDI S EKF L+  KVG KAG     G+SV VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFF
          VI SNKD NVYELR+F
Subjt:  PWVIVSNKDVNVYELRFF

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]1.5e-3470.49Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKGV F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG++V VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYELR+F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

TrEMBL top hitse value%identityAlignment
A0A0A0K637 Uncharacterized protein3.3e-3571.31Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKGV F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG+SV VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYELR+F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

A0A1S3BRQ9 60S ribosomal protein L22-23.3e-3571.31Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKGV F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG+SV VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYELR+F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

A0A5D3D2W6 60S ribosomal protein L22-2-like3.3e-3571.31Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKGV F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG+SV VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYELR+F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

A0A6J1DLK6 60S ribosomal protein L22-23.3e-3571.31Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKGV F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG+SV VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYELR+F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

A0A6J1JVR1 60S ribosomal protein L22-2-like1.6e-3469.67Show/hide
Query:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC
        +S GAAASGGPKG KKGV F+I C KPVEDKIMDI S EKF L+  KVG KAG    LG++V VT+DKNKITVN++ NFS RYLKYLTK+YLKKHN+RD 
Subjt:  ISCGAAASGGPKG-KKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDC

Query:  PWVIVSNKDVNVYELRFFFILE
          VI SNKD NVYEL++F I E
Subjt:  PWVIVSNKDVNVYELRFFFILE

SwissProt top hitse value%identityAlignment
P47198 60S ribosomal protein L222.3e-1746.9Show/hide
Query:  ASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVIVSN
        A GG K K+ + F + C  PVED IMD  + E+F  +  KV  KAG     G  V + + K+KITV +   FS RYLKYLTK+YLKK+N+RD   V+ ++
Subjt:  ASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVIVSN

Query:  KDVNVYELRFFFI
        K+   YELR+F I
Subjt:  KDVNVYELRFFFI

Q98TF8 60S ribosomal protein L221.7e-1747.37Show/hide
Query:  AASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVIVS
        AA GG K K+ + F + C  PVED IMD  + E+F  +  KV  KAG     G  V + + K+KITV +   FS RYLKYLTK+YLKK+N+RD   V+ +
Subjt:  AASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVIVS

Query:  NKDVNVYELRFFFI
        +K+   YELR+F I
Subjt:  NKDVNVYELRFFFI

Q9FE58 60S ribosomal protein L22-31.7e-2858.06Show/hide
Query:  ISCGAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCP
        +S G AA+   K KKGV+F I C KPV+DKIM+I S EKF  +  KVG KAG    LG+SV++T++K+KITV  +  FS RYLKYLTK+YLKKHN+RD  
Subjt:  ISCGAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCP

Query:  WVIVSNKDVNVYELRFFFILETTA
         VI +NKD N+YELR+F I E  A
Subjt:  WVIVSNKDVNVYELRFFFILETTA

Q9M9W1 60S ribosomal protein L22-24.9e-2859.32Show/hide
Query:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI
        GAA + G   KKGV+F I C KPV+DKIM+I S EKF  +  KVG KAG    LG+SV +T++K+KITV  +  FS RYLKYLTK+YLKKHN+RD   VI
Subjt:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI

Query:  VSNKDVNVYELRFFFILE
         +NKD N+YELR+F I E
Subjt:  VSNKDVNVYELRFFFILE

Q9SRX7 Putative 60S ribosomal protein L22-11.4e-2756.2Show/hide
Query:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI
        GA +SG    KKGV+F+I C KPV+D I++I + EKF  +  KV  KAG    LGNSV++T+   KI VN N NFS RYLKYLTK+YLKK+N+RD   VI
Subjt:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI

Query:  VSNKDVNVYELRFFFILETTA
         SNKD NVYE+R+F I +  A
Subjt:  VSNKDVNVYELRFFFILETTA

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family1.0e-2856.2Show/hide
Query:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI
        GA +SG    KKGV+F+I C KPV+D I++I + EKF  +  KV  KAG    LGNSV++T+   KI VN N NFS RYLKYLTK+YLKK+N+RD   VI
Subjt:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI

Query:  VSNKDVNVYELRFFFILETTA
         SNKD NVYE+R+F I +  A
Subjt:  VSNKDVNVYELRFFFILETTA

AT3G05560.1 Ribosomal L22e protein family3.5e-2959.32Show/hide
Query:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI
        GAA + G   KKGV+F I C KPV+DKIM+I S EKF  +  KVG KAG    LG+SV +T++K+KITV  +  FS RYLKYLTK+YLKKHN+RD   VI
Subjt:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI

Query:  VSNKDVNVYELRFFFILE
         +NKD N+YELR+F I E
Subjt:  VSNKDVNVYELRFFFILE

AT3G05560.2 Ribosomal L22e protein family3.5e-2959.32Show/hide
Query:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI
        GAA + G   KKGV+F I C KPV+DKIM+I S EKF  +  KVG KAG    LG+SV +T++K+KITV  +  FS RYLKYLTK+YLKKHN+RD   VI
Subjt:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI

Query:  VSNKDVNVYELRFFFILE
         +NKD N+YELR+F I E
Subjt:  VSNKDVNVYELRFFFILE

AT3G05560.3 Ribosomal L22e protein family3.5e-2959.32Show/hide
Query:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI
        GAA + G   KKGV+F I C KPV+DKIM+I S EKF  +  KVG KAG    LG+SV +T++K+KITV  +  FS RYLKYLTK+YLKKHN+RD   VI
Subjt:  GAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCPWVI

Query:  VSNKDVNVYELRFFFILE
         +NKD N+YELR+F I E
Subjt:  VSNKDVNVYELRFFFILE

AT5G27770.1 Ribosomal L22e protein family1.2e-2958.06Show/hide
Query:  ISCGAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCP
        +S G AA+   K KKGV+F I C KPV+DKIM+I S EKF  +  KVG KAG    LG+SV++T++K+KITV  +  FS RYLKYLTK+YLKKHN+RD  
Subjt:  ISCGAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKRYLKKHNIRDCP

Query:  WVIVSNKDVNVYELRFFFILETTA
         VI +NKD N+YELR+F I E  A
Subjt:  WVIVSNKDVNVYELRFFFILETTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATTGTTCCATACAGATGCAAGAGAGTTAGGGACACAAGTTGCAGAGCAGAAGCAAAAATAAGTTGTGGAGCAGCCGCATCTGGTGGCCCAAAGGGGAAGAAGGG
TGTGGCCTTCATCATCGGTTGTGTGAAGCCAGTTGAGGACAAGATCATGGACATCATCTCGTCAGAGAAGTTTTTTCTCAAGGGCAACAAGGTCGGTGACAAAGCTGGGG
TGGCAGCAACACTTGGTAACTCAGTTGCTGTCACTCAGGACAAGAACAAGATCACCGTCAACACCAATAGAAACTTCTCCAGTAGGTATCTTAAATACTTGACTAAGAGG
TATTTGAAGAAACACAACATTAGAGATTGTCCTTGGGTTATTGTTTCAAACAAGGACGTGAACGTCTATGAATTGAGATTTTTTTTTATATTAGAAACAACTGCATTCAT
TGATAGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATTGTTCCATACAGATGCAAGAGAGTTAGGGACACAAGTTGCAGAGCAGAAGCAAAAATAAGTTGTGGAGCAGCCGCATCTGGTGGCCCAAAGGGGAAGAAGGG
TGTGGCCTTCATCATCGGTTGTGTGAAGCCAGTTGAGGACAAGATCATGGACATCATCTCGTCAGAGAAGTTTTTTCTCAAGGGCAACAAGGTCGGTGACAAAGCTGGGG
TGGCAGCAACACTTGGTAACTCAGTTGCTGTCACTCAGGACAAGAACAAGATCACCGTCAACACCAATAGAAACTTCTCCAGTAGGTATCTTAAATACTTGACTAAGAGG
TATTTGAAGAAACACAACATTAGAGATTGTCCTTGGGTTATTGTTTCAAACAAGGACGTGAACGTCTATGAATTGAGATTTTTTTTTATATTAGAAACAACTGCATTCAT
TGATAGAAAATGA
Protein sequenceShow/hide protein sequence
MPIVPYRCKRVRDTSCRAEAKISCGAAASGGPKGKKGVAFIIGCVKPVEDKIMDIISSEKFFLKGNKVGDKAGVAATLGNSVAVTQDKNKITVNTNRNFSSRYLKYLTKR
YLKKHNIRDCPWVIVSNKDVNVYELRFFFILETTAFIDRK