| GenBank top hits | e value | %identity | Alignment |
|---|
| TYK01775.1 replication factor C subunit 4 [Cucumis melo var. makuwa] | 1.9e-114 | 70.98 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHISN
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV ED
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| XP_004142636.1 replication factor C subunit 4 [Cucumis sativus] | 1.5e-111 | 69.25 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHI N
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTLSSISQGDLRRAITYLQ IIP+EVVDALF ACKSGNFD ANK+VNNVLAEGYPVAQMLSQIFEVV ED
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQ L S+QL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| XP_008444196.1 PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 4 [Cucumis melo] | 1.4e-114 | 70.98 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHISN
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV ED
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| XP_023523758.1 replication factor C subunit 4 [Cucurbita pepo subsp. pepo] | 6.3e-110 | 68.77 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAI+H+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS +VMSKRILHISN
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTLSSISQGDLRRAITYLQ IIPREVVD LF ACKSGNFD+ANKEVNNV+AEGYPVAQMLSQIFEVV E
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL-SSMQL
+DLQDEQKA+ICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SSMQL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL-SSMQL
|
|
| XP_038897028.1 replication factor C subunit 4 [Benincasa hispida] | 1.7e-115 | 71.55 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHISN
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVED
EEGLSLDGEALSTLSSISQGDLRRAITYLQ IIPREVVDALF+ACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE VVED
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KYI8 AAA domain-containing protein | 7.2e-112 | 69.25 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHI N
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTLSSISQGDLRRAITYLQ IIP+EVVDALF ACKSGNFD ANK+VNNVLAEGYPVAQMLSQIFEVV ED
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQ L S+QL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| A0A1S3B9T6 LOW QUALITY PROTEIN: replication factor C subunit 4 | 7.0e-115 | 70.98 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHISN
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV ED
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| A0A5A7UDC8 Replication factor C subunit 4 | 2.6e-109 | 69.94 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHISN
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV ED
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVV
NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDV+
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVV
|
|
| A0A5D3BRF2 Replication factor C subunit 4 | 9.1e-115 | 70.98 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHISN
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTLSS+SQGDLRRAITYLQ IIPREVVDALFTACKSGNFD ANKEVNNVLAEGYPVAQMLSQIFEVV ED
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SMQL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSMQL
|
|
| A0A6J1IVB8 replication factor C subunit 4 | 8.8e-110 | 68.48 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAI+H+LFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA GYPCPPFKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T S + T F F+ + RIIEPLASRCAKFRFKPLS EVMSKRILHISN
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
EEGLSLDGEALSTL SISQGDLRRAITYLQ IIPREVVD LF ACKSGNFD+ANKEVNNV+AEGYPVAQMLSQIFEVV E
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV-ED
Query: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL-SSMQL
+DLQDEQKA+ICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL SSMQL
Subjt: NDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQAL-SSMQL
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P35249 Replication factor C subunit 4 | 4.1e-64 | 42.47 | Show/hide |
Query: PHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA-------GYPCPPFKIIILDEADSMTEDAQIFLLKSFFLMF
P++LFYGPPGTGKT+T LA + +LFGPEL++ RVLELNASD+RGI VVR K+K+FA + G PCPPFKI+ILDEADSMT AQ L ++
Subjt: PHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA-------GYPCPPFKIIILDEADSMTEDAQIFLLKSFFLMF
Query: AVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALS
+ SK ++F +I + + RIIEPL SRC+KFRFKPLS ++ +R+L I+ +E + + E ++
Subjt: AVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALS
Query: TLSSISQGDLRRAITYLQ---------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVEDNDLQDEQKARIC
L +S+GDLR+AIT+LQ +IP E +D +F AC+SG+FD V +++ EG+ Q+++Q+ +VV +N+L D+QK+ I
Subjt: TLSSISQGDLRRAITYLQ---------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVVEDNDLQDEQKARIC
Query: KKLAEADKCLVDGADEYLQLLDVVSQTMQALS
+KLAE DKCL DGADE+LQL+ + + MQ LS
Subjt: KKLAEADKCLVDGADEYLQLLDVVSQTMQALS
|
|
| Q54MD4 Probable replication factor C subunit 4 | 1.4e-56 | 39.82 | Show/hide |
Query: PHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDAQIFLLKSFFLM
PH+LFYGPPGTGKT+T LAI+ ++GPEL K RVLELNASD+RGI VVRTKIK+FAG A P FK+IILDEADSMT DAQ L ++
Subjt: PHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDAQIFLLKSFFLM
Query: FAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEAL
+ T SK ++F ++ + RII+PLASRCAKFRFKPL +R+ IS +EG+ +
Subjt: FAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEAL
Query: STLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARI
+ +S GD+R+AITYLQ +P +++ L CK +FD V +++A+GYPV+Q++SQ+F+ V+ DL QK+ I
Subjt: STLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARI
Query: CKKLAEADKCLVDGADEYLQLLDVVSQTMQALSS
K+ D+ L+DG++E+LQL D+ S M+ L++
Subjt: CKKLAEADKCLVDGADEYLQLLDVVSQTMQALSS
|
|
| Q93ZX1 Replication factor C subunit 4 | 1.4e-99 | 61.1 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VA GYPCP FKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMS RILHI N
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--E
EEGLSLDGEALSTLSSISQGDLRRAITYLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--E
Query: DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
D+D+ D QKA+ICK LAE DK LVDGADEYLQLLDV S T+ ALS M
Subjt: DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
|
|
| Q99J62 Replication factor C subunit 4 | 3.9e-62 | 41.74 | Show/hide |
Query: PHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA-------GYPCPPFKIIILDEADSMTEDAQIFLLKSFFLMF
P++LFYGPPGTGKT+T LA + +LFGPEL++ RVLELNASD+RGI VVR K+K+FA + G PCPPFKI+ILDEADSMT AQ L ++
Subjt: PHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA-------GYPCPPFKIIILDEADSMTEDAQIFLLKSFFLMF
Query: AVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALS
+ SK ++F +I + + RIIEPL SRC+KFRFKPLS ++ +R+L I+ +E + + E ++
Subjt: AVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALS
Query: TLSSISQGDLRRAITYLQ---------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARI
L IS+GDLR+AIT+LQ +IP +D +FTAC SG+FD V N++ EG+ Q+++Q+ + ++E+ +L D+ K+ I
Subjt: TLSSISQGDLRRAITYLQ---------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFE-VVEDNDLQDEQKARI
Query: CKKLAEADKCLVDGADEYLQLLDVVSQTMQALS
+KLAE DKCL DGADE+LQL+ + + MQ L+
Subjt: CKKLAEADKCLVDGADEYLQLLDVVSQTMQALS
|
|
| Q9FXM3 Replication factor C subunit 2 | 6.3e-97 | 59.13 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA-------GYPCPPFKIIILDEADSMTEDAQ
V + L PHMLFYGPPGTGKTTTALAI++QL+GPELYKSRVLELNASDDRGINVVRTKIKDFA VA GYPCPP+KIIILDEADSMTEDAQ
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA-------GYPCPPFKIIILDEADSMTEDAQ
Query: IFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNE
L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMS RILHI NE
Subjt: IFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNE
Query: EGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEV-VEDN
EGLSLD +AL+TLS+IS GDLRRAITYLQ IP +VV +L +CKSG FD+ANKEVNN++A+GYPV+Q++SQ +V V +
Subjt: EGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEV-VEDN
Query: DLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
D+ DEQKARICKKL EADKCLVDGADEYLQLLDV S+T++AL M
Subjt: DLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G21690.1 ATPase family associated with various cellular activities (AAA) | 9.7e-101 | 61.1 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VA GYPCP FKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMS RILHI N
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--E
EEGLSLDGEALSTLSSISQGDLRRAITYLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--E
Query: DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
D+D+ D QKA+ICK LAE DK LVDGADEYLQLLDV S T+ ALS M
Subjt: DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
|
|
| AT1G21690.2 ATPase family associated with various cellular activities (AAA) | 4.3e-101 | 62.24 | Show/hide |
Query: EQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDAQIFLLKSF
E CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VA GYPCP FKIIILDEADSMTEDAQ L ++
Subjt: EQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDAQIFLLKSF
Query: FLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDG
+ T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMS RILHI NEEGLSLDG
Subjt: FLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDG
Query: EALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQ
EALSTLSSISQGDLRRAITYLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V D+D+ D Q
Subjt: EALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--EDNDLQDEQ
Query: KARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
KA+ICK LAE DK LVDGADEYLQLLDV S T+ ALS M
Subjt: KARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
|
|
| AT1G21690.3 ATPase family associated with various cellular activities (AAA) | 9.1e-91 | 59.81 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAI+HQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VA GYPCP FKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMS RILHI N
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--E
EEGLSLDGEALSTLSSISQGDLRRAITYLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--E
Query: DNDLQDEQKARICKKLAEADK
D+D+ D QKA+ICK LAE DK
Subjt: DNDLQDEQKARICKKLAEADK
|
|
| AT1G21690.4 ATPase family associated with various cellular activities (AAA) | 3.0e-94 | 59.08 | Show/hide |
Query: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
V + L CPHMLFYGPPGTGKTTTALAI+HQLFG VLELNASDDRGINVVRTKIKDFA VA GYPCP FKIIILDEADSMTEDA
Subjt: VFSIRLLVEQCPHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVA--------GYPCPPFKIIILDEADSMTEDA
Query: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Q L ++ + T SK+ T F F+ + RIIEPLASRCAKFRFKPLS EVMS RILHI N
Subjt: QIFLLKSFFLMFAVFNLLLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISN
Query: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--E
EEGLSLDGEALSTLSSISQGDLRRAITYLQ ++P EVV+ LFTACKSG+FDIANKEV+N++AEGYP +Q+++Q+F++V
Subjt: EEGLSLDGEALSTLSSISQGDLRRAITYLQ--------------------IIPREVVDALFTACKSGNFDIANKEVNNVLAEGYPVAQMLSQIFEVV--E
Query: DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
D+D+ D QKA+ICK LAE DK LVDGADEYLQLLDV S T+ ALS M
Subjt: DNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVSQTMQALSSM
|
|
| AT1G77470.1 replication factor C subunit 3 | 9.9e-29 | 30.15 | Show/hide |
Query: PHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAGYPC--PPFKIIILDEADSMTEDAQIFLLKSFFLMFAVFNL
PH+L YGPPGTGKT+T LA++ +L+GP+ Y++ +LELNASDDRGI+VVR +I+DFA + K+++LDEAD+MT+DAQ L +
Subjt: PHMLFYGPPGTGKTTTALAISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAGYPC--PPFKIIILDEADSMTEDAQIFLLKSFFLMFAVFNL
Query: LLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSI
+ K S T FA + G V +II L SRC +FRF PL MS+R+ H+ E L + L+ L +
Subjt: LLHLFFGFGLMILMTVSKLLWSKFIIIAHTMFAFVIHLWIRRLGELVVLFLRIIEPLASRCAKFRFKPLSVEVMSKRILHISNEEGLSLDGEALSTLSSI
Query: SQGDLRRAITYLQII-----------PREVVDALFTACKSGN-----------------FDIANKEVNNV-LAEGYPVAQMLSQIFEVVEDNDLQDEQKA
S GD+R+A+ LQ +++ + C +GN FD K+V+ + +G + ++ +I + + +
Subjt: SQGDLRRAITYLQII-----------PREVVDALFTACKSGN-----------------FDIANKEVNNV-LAEGYPVAQMLSQIFEVVEDNDLQDEQKA
Query: RICKKLAEADKCLVDGADEYLQLLDVVSQTMQALS
++ LA+ + L G ++ LQL ++S A S
Subjt: RICKKLAEADKCLVDGADEYLQLLDVVSQTMQALS
|
|
