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HG10013309 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013309
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein HAPLESS 2 isoform X1
Genome locationChr02:273747..275577
RNA-Seq ExpressionHG10013309
SyntenyHG10013309
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK30002.1 protein HAPLESS 2 isoform X1 [Cucumis melo var. makuwa]6.8e-3654.4Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNL----------------------------------------------
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSCSSVCGSTWDFICYIENFCV+NL                                              
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNL----------------------------------------------

Query:  -LKMGMVLIL--------SYFVSREPEDGTFGEETLKKSLKAKKENAGMGQQAIQAMSPNMWSRELADGRLVNGRGTTGILK
         L +  +L+L        S  VS+E +D T GEET KKSLKAKKENA M QQA +AMS NM SRE+ADGRL +G GTT ILK
Subjt:  -LKMGMVLIL--------SYFVSREPEDGTFGEETLKKSLKAKKENAGMGQQAIQAMSPNMWSRELADGRLVNGRGTTGILK

XP_004142706.1 protein HAPLESS 2 isoform X1 [Cucumis sativus]1.7e-2694.03Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSCSSVCGSTWDFICYIENFCV+NLLKMGMV ILSYFV
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV

XP_008444189.1 PREDICTED: protein HAPLESS 2 isoform X1 [Cucumis melo]3.7e-2692.54Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSCSSVCGSTWDFICYIENFCV+NL+KMGMV ILSYFV
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV

XP_038897053.1 uncharacterized protein LOC120085227 isoform X1 [Benincasa hispida]1.2e-2797.01Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
        MGNVASSL SG+FSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV

XP_038897054.1 uncharacterized protein LOC120085227 isoform X2 [Benincasa hispida]8.8e-2895.59Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFVS
        MGNVASSL SG+FSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYF S
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFVS

TrEMBL top hitse value%identityAlignment
A0A0A0L1V0 Uncharacterized protein8.1e-2794.03Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSCSSVCGSTWDFICYIENFCV+NLLKMGMV ILSYFV
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV

A0A1S4DVV8 protein HAPLESS 2 isoform X11.8e-2692.54Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSCSSVCGSTWDFICYIENFCV+NL+KMGMV ILSYFV
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV

A0A5D3E285 Protein HAPLESS 2 isoform X13.3e-3654.4Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNL----------------------------------------------
        MGNVASSLAS VFSAIGK+FGSPLDFLSGRSCSSVCGSTWDFICYIENFCV+NL                                              
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNL----------------------------------------------

Query:  -LKMGMVLIL--------SYFVSREPEDGTFGEETLKKSLKAKKENAGMGQQAIQAMSPNMWSRELADGRLVNGRGTTGILK
         L +  +L+L        S  VS+E +D T GEET KKSLKAKKENA M QQA +AMS NM SRE+ADGRL +G GTT ILK
Subjt:  -LKMGMVLIL--------SYFVSREPEDGTFGEETLKKSLKAKKENAGMGQQAIQAMSPNMWSRELADGRLVNGRGTTGILK

A0A6J1FIX0 uncharacterized protein LOC1114458933.4e-2588.06Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
        MGNVASSLASG+F A+ KVFGSPLDFLSG+SCSSVCGSTWDFICYIENFCV+NLLKMGMV+IL+YFV
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV

A0A6J1IVE5 uncharacterized protein LOC1114803123.4e-2588.06Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
        MGNVASSLASG+F A+ KVFGSPLDFLSG+SCSSVCGSTWDFICYIENFCV+NLLKMGMV+IL+YFV
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21722.1 unknown protein8.5e-2168.18Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYF
        MGNV  S  +G   +IG  FGSPLDFLSG+SCSSVC S WDFICY+ENFCV+NL K  ++LILSYF
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYF

AT1G78922.1 unknown protein1.1e-0734.33Show/hide
Query:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV
        MGN     ++ +   IG +F +PL    GRSC  VC   WD  C+IE+FC+ ++ K+ ++  L + +
Subjt:  MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAATGTAGCCAGTTCATTGGCCTCTGGTGTTTTTTCGGCCATTGGGAAAGTCTTTGGATCCCCACTTGATTTTCTCTCTGGAAGGTCCTGCAGTTCAGTTTGTGG
ATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGTGTTTCCAATTTGCTAAAGATGGGAATGGTCTTGATCCTTTCATACTTTGTGTCAAGAGAACCAGAAGACG
GCACTTTCGGAGAAGAGACCTTGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGCCGGCATGGGTCAACAAGCGATTCAAGCAATGTCCCCGAACATGTGGAGTCGAGAA
TTAGCAGACGGGCGTCTCGTCAATGGAAGAGGAACCACAGGGATTCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAATGTAGCCAGTTCATTGGCCTCTGGTGTTTTTTCGGCCATTGGGAAAGTCTTTGGATCCCCACTTGATTTTCTCTCTGGAAGGTCCTGCAGTTCAGTTTGTGG
ATCAACATGGGATTTCATATGCTACATAGAAAATTTCTGTGTTTCCAATTTGCTAAAGATGGGAATGGTCTTGATCCTTTCATACTTTGTGTCAAGAGAACCAGAAGACG
GCACTTTCGGAGAAGAGACCTTGAAGAAGAGTTTGAAAGCGAAGAAGGAAAATGCCGGCATGGGTCAACAAGCGATTCAAGCAATGTCCCCGAACATGTGGAGTCGAGAA
TTAGCAGACGGGCGTCTCGTCAATGGAAGAGGAACCACAGGGATTCTCAAATGA
Protein sequenceShow/hide protein sequence
MGNVASSLASGVFSAIGKVFGSPLDFLSGRSCSSVCGSTWDFICYIENFCVSNLLKMGMVLILSYFVSREPEDGTFGEETLKKSLKAKKENAGMGQQAIQAMSPNMWSRE
LADGRLVNGRGTTGILK