; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013423 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013423
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMADS-box transcription factor 23-like isoform X1
Genome locationChr02:1327392..1328082
RNA-Seq ExpressionHG10013423
SyntenyHG10013423
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK31251.1 MADS-box transcription factor 23-like isoform X1 [Cucumis melo var. makuwa]2.6e-5796Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQIL+DEIQELNRKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAHISSLTNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN TPERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

XP_004136416.2 MADS-box transcription factor 23 isoform X1 [Cucumis sativus]2.0e-5795.2Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILM+EIQELNRKGNLIHHDNMELYKKVNLI QENQELHKKVYGTKDANGAHISS+TNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN  PERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

XP_008466131.1 PREDICTED: MADS-box transcription factor 23-like isoform X1 [Cucumis melo]2.6e-5796Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQIL+DEIQELNRKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAHISSLTNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN TPERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

XP_008466132.1 PREDICTED: MADS-box transcription factor 23-like isoform X2 [Cucumis melo]2.6e-5796Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQIL+DEIQELNRKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAHISSLTNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN TPERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

XP_031738208.1 MADS-box transcription factor 23 isoform X2 [Cucumis sativus]2.0e-5795.2Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILM+EIQELNRKGNLIHHDNMELYKKVNLI QENQELHKKVYGTKDANGAHISS+TNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN  PERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

TrEMBL top hitse value%identityAlignment
A0A0A0LGY3 Uncharacterized protein9.8e-5895.2Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILM+EIQELNRKGNLIHHDNMELYKKVNLI QENQELHKKVYGTKDANGAHISS+TNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN  PERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

A0A1S3CQJ0 MADS-box transcription factor 23-like isoform X21.3e-5796Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQIL+DEIQELNRKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAHISSLTNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN TPERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

A0A1S4E6G1 MADS-box transcription factor 23-like isoform X11.3e-5796Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQIL+DEIQELNRKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAHISSLTNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN TPERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

A0A5A7T5X8 MADS-box transcription factor 23-like isoform X11.3e-5796Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQIL+DEIQELNRKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAHISSLTNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN TPERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

A0A5D3E6T0 MADS-box transcription factor 23-like isoform X11.3e-5796Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQIL+DEIQELNRKGNLIH DNMELYKKVNLI QENQELHKKVYGTKDANGAHISSLTNGL VGEDAG
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
        IPINLQLSQPQQQDN TPERATKLG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

SwissProt top hitse value%identityAlignment
A2RVQ5 Agamous-like MADS-box protein AGL161.3e-3059.69Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKK---VYGTKDANGAHISSLTNGLGVGE
        MMGEEL+GLSV+ LQNLENQLE+SLRGVRMKKDQ+L++EIQ LNR+GNL+H +N++L+KKVNL+ Q+N ELH+K   V G K AN    S LTNGL + +
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKK---VYGTKDANGAHISSLTNGLGVGE

Query:  DAGIPINLQLSQPQQQDNGTPERATKLGY
         +   ++LQLSQP Q D+ T  +A +L Y
Subjt:  DAGIPINLQLSQPQQQDNGTPERATKLGY

Q38840 Agamous-like MADS-box protein AGL173.6e-2554.46Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        + G EL GLSVK+LQN+E+QLE+SLRG+RMK++QIL +EI+EL RK NL+HH+N+EL +KV  I QEN EL+KK YGT + NG     L + +    ++ 
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQ
          + LQLSQP+Q
Subjt:  IPINLQLSQPQQ

Q6EP49 MADS-box transcription factor 272.0e-2854.76Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLT-NGLGVGEDA
        +MGE+L+GL+VK+LQ+LENQLEISLR VR KKD +L+DEI ELNRKG+L+H +NMELYKK++LIRQEN EL+KK+Y T+  +  +  S T     V E  
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLT-NGLGVGEDA

Query:  GIPINLQLSQPQQQDNGTPERATKLG
         +P+ L LS   Q  +     A KLG
Subjt:  GIPINLQLSQPQQQDNGTPERATKLG

Q6Z6W2 MADS-box transcription factor 576.0e-2047.06Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVY-----GTKDANGAHISSLTNGLGV
        +MGEEL+GL V+DLQ LEN+LEISLR +RM+KD +L  EI+EL+ KG+LIH +N+EL + +N++ Q+  EL+ K+      G  DAN +  SS      +
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVY-----GTKDANGAHISSLTNGLGV

Query:  GEDAGIPINLQLSQPQQQD
         ++A +P +L+LSQ QQ++
Subjt:  GEDAGIPINLQLSQPQQQD

Q9SZJ6 Agamous-like MADS-box protein AGL212.6e-2350.81Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGED-A
        MMGE+L GLSV +L +LENQ+EISLRG+RM+K+Q+L  EIQEL++K NLIH +N++L +KV  I QEN EL+KK Y        H       + V +D +
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGED-A

Query:  GIPINLQLSQPQQQDNGTPERATK
           I LQLSQP+  D  TP RA +
Subjt:  GIPINLQLSQPQQQDNGTPERATK

Arabidopsis top hitse value%identityAlignment
AT2G14210.1 AGAMOUS-like 448.8e-1944Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        ++GEEL+G++  DLQNLE+QL  SL+GVR+KKDQ++ +EI+ELNRKG +I  +N EL   V+++R+EN +L KKV+G    N    +S  + +  G    
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQQDNGTPERATKLG
         P  LQL Q Q       E++ +LG
Subjt:  IPINLQLSQPQQQDNGTPERATKLG

AT2G22630.1 AGAMOUS-like 172.6e-2654.46Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG
        + G EL GLSVK+LQN+E+QLE+SLRG+RMK++QIL +EI+EL RK NL+HH+N+EL +KV  I QEN EL+KK YGT + NG     L + +    ++ 
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAG

Query:  IPINLQLSQPQQ
          + LQLSQP+Q
Subjt:  IPINLQLSQPQQ

AT3G57230.1 AGAMOUS-like 169.1e-3259.69Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKK---VYGTKDANGAHISSLTNGLGVGE
        MMGEEL+GLSV+ LQNLENQLE+SLRGVRMKKDQ+L++EIQ LNR+GNL+H +N++L+KKVNL+ Q+N ELH+K   V G K AN    S LTNGL + +
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKK---VYGTKDANGAHISSLTNGLGVGE

Query:  DAGIPINLQLSQPQQQDNGTPERATKLGY
         +   ++LQLSQP Q D+ T  +A +L Y
Subjt:  DAGIPINLQLSQPQQQDNGTPERATKLGY

AT3G57230.2 AGAMOUS-like 169.1e-3259.69Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKK---VYGTKDANGAHISSLTNGLGVGE
        MMGEEL+GLSV+ LQNLENQLE+SLRGVRMKKDQ+L++EIQ LNR+GNL+H +N++L+KKVNL+ Q+N ELH+K   V G K AN    S LTNGL + +
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKK---VYGTKDANGAHISSLTNGLGVGE

Query:  DAGIPINLQLSQPQQQDNGTPERATKLGY
         +   ++LQLSQP Q D+ T  +A +L Y
Subjt:  DAGIPINLQLSQPQQQDNGTPERATKLGY

AT4G37940.1 AGAMOUS-like 211.8e-2450.81Show/hide
Query:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGED-A
        MMGE+L GLSV +L +LENQ+EISLRG+RM+K+Q+L  EIQEL++K NLIH +N++L +KV  I QEN EL+KK Y        H       + V +D +
Subjt:  MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGED-A

Query:  GIPINLQLSQPQQQDNGTPERATK
           I LQLSQP+  D  TP RA +
Subjt:  GIPINLQLSQPQQQDNGTPERATK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGTGAAGAGCTGACTGGTTTGAGCGTCAAAGACCTACAGAATCTAGAAAATCAATTGGAGATAAGTCTCCGTGGCGTCCGTATGAAGAAGGATCAAATCTTAAT
GGATGAGATACAAGAGCTAAACAGAAAGGGAAACCTAATTCACCATGACAATATGGAACTTTATAAGAAGGTAAACCTAATTCGTCAAGAAAACCAGGAATTACACAAAA
AGGTCTATGGAACAAAGGATGCCAATGGAGCACACATAAGCAGTCTTACAAACGGACTTGGTGTTGGAGAGGATGCAGGCATACCTATCAACCTTCAACTCAGCCAACCA
CAGCAACAAGACAATGGGACACCAGAAAGAGCTACAAAACTGGGGTACAATTATGAAAAAATTTCATCAATGATCAACAATGAATACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGTGAAGAGCTGACTGGTTTGAGCGTCAAAGACCTACAGAATCTAGAAAATCAATTGGAGATAAGTCTCCGTGGCGTCCGTATGAAGAAGGATCAAATCTTAAT
GGATGAGATACAAGAGCTAAACAGAAAGGGAAACCTAATTCACCATGACAATATGGAACTTTATAAGAAGGTAAACCTAATTCGTCAAGAAAACCAGGAATTACACAAAA
AGGTCTATGGAACAAAGGATGCCAATGGAGCACACATAAGCAGTCTTACAAACGGACTTGGTGTTGGAGAGGATGCAGGCATACCTATCAACCTTCAACTCAGCCAACCA
CAGCAACAAGACAATGGGACACCAGAAAGAGCTACAAAACTGGGGTACAATTATGAAAAAATTTCATCAATGATCAACAATGAATACAAATGA
Protein sequenceShow/hide protein sequence
MMGEELTGLSVKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHHDNMELYKKVNLIRQENQELHKKVYGTKDANGAHISSLTNGLGVGEDAGIPINLQLSQP
QQQDNGTPERATKLGYNYEKISSMINNEYK