CuGenDBv2

Gene ID	HG10013426
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Rhamnogalacturonan endolyase
Genome location	Chr02:1358460..1365129
RNA-Seq Expression	HG10013426
Synteny	HG10013426
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0005576 - extracellular region (cellular component) GO:0030246 - carbohydrate binding (molecular function) GO:0102210 - rhamnogalacturonan endolyase activity (molecular function)
InterPro domains	IPR008979 - Galactose-binding-like domain superfamily IPR010325 - Rhamnogalacturonate lyase IPR011013 - Galactose mutarotase-like domain superfamily IPR013784 - Carbohydrate-binding-like fold IPR014718 - Glycoside hydrolase-type carbohydrate-binding IPR029411 - Rhamnogalacturonan lyase, domain III IPR029413 - Rhamnogalacturonan lyase, domain II

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136250.1 probable rhamnogalacturonate lyase B isoform X1 [Cucumis sativus]

0.0e+00

91.65

Show/hide

Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSSR+ VRLQIRDHHVVVDNGILQLTLSKPDGIITG+RYNGVDNLLEVLNPESNRG                 IKGS FRVIVENEEQVELSF+RMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNP LKGE
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGP+FLYLNSTSVGDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEV+SWPYSFPASEDFPK DQRGIV GRLLVFDRY+D DYLPA GAFVGLSAPGE GSWQRECKGYQFWTRADDGGYFTINH+HTG+YN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LYAWVPGF+GDYRC ALINV+QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFV+HPDRFRQYGLW+RYAELYP+EDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY KDWFFA VPRKTN NSHEGTTWQI+FKL+RVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHG+ GIYW+Y VGVAGCH
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK
        LVEG+N IFLTQPRCTSPFQGIMYDYIRLEGPPTK
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK

XP_008466137.1 PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Cucumis melo]

0.0e+00

90.87

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Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSS++ VRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG                 IKGS F VIVENEEQVELSF+RMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGE
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGP+FLYLNSTSVGDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEVESWPYSFPASEDF K DQRG+V GRLLVFDRY+D DYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+ TGDYN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LYAWVPGF+GDYRC AL+NV+QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPI+INKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY KDWFFA VPRKTNSNSHEGTTWQI+F+L+RVD KSMY LRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHG+ GIYW+YSV VAGCH
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK
        LVEG+N IFLTQPRCTSPFQGIMYDYIRLEGPPTK
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK

XP_022940913.1 probable rhamnogalacturonate lyase B isoform X1 [Cucurbita moschata]

0.0e+00

87.85

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Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSSR GVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG                 IKGSSFRVIVENEEQVELSF RMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQR+MPLPDDRLSGRCQTL +PEAVLLTNPKNPE + E
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSC+NKDLKVHGWI TNPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLSTHYAGQDLVPKFR GEPWKKVFGP+FLYLNST  GDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEV+SWPYSFPAS+DFPK+DQRG + GRLLVFDRYM  DYLPA GAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LYAWVPGF+GDYRC ALIN++QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNP+HINKLFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY+KDWFFAQVPRKTN NSH+GTTW+I FKL+RVD K+ Y LRVAIASATLAELQ+RVNDP SKRPLFTSGLIGRDNSIARHG+ GIYWLYSVG+AG H
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT
        LVEGDN IF TQPRCTSPFQGIMYDYIRLE P T
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT

XP_031739419.1 probable rhamnogalacturonate lyase B isoform X2 [Cucumis sativus]

0.0e+00

94.17

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Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGIKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNIDKRFIVL
        MSSR+ VRLQIRDHHVVVDNGILQLTLSKPDGIITG+RYNGVDNLLEVLNPESNRGIKGS FRVIVENEEQVELSF+RMWDPSLEGKFVPLNIDKRFIVL
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGIKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNIDKRFIVL

Query:  RGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVH
        RGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNP LKGEVDDKYQYSCEN +LKVH
Subjt:  RGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVH

Query:  GWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWLWEDAKIQMMAEVESW
        GWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGP+FLYLNSTSVGDDPFWLWEDAKIQMMAEV+SW
Subjt:  GWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWLWEDAKIQMMAEVESW

Query:  PYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGDYRCGAL
        PYSFPASEDFPK DQRGIV GRLLVFDRY+D DYLPA GAFVGLSAPGE GSWQRECKGYQFWTRADDGGYFTINH+HTG+YNLYAWVPGF+GDYRC AL
Subjt:  PYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGDYRCGAL

Query:  INVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQVPRKTN
        INV+QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFV+HPDRFRQYGLW+RYAELYP+EDLVYTVGTSDY KDWFFA VPRKTN
Subjt:  INVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQVPRKTN

Query:  SNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRCTS
         NSHEGTTWQI+FKL+RVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHG+ GIYW+Y VGVAGCHLVEG+N IFLTQPRCTS
Subjt:  SNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRCTS

Query:  PFQGIMYDYIRLEGPPTK
        PFQGIMYDYIRLEGPPTK
Subjt:  PFQGIMYDYIRLEGPPTK

XP_038897922.1 probable rhamnogalacturonate lyase B [Benincasa hispida]

0.0e+00

92.27

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Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSSR GVRLQIRDHHVVV+NGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG                 IKGSSFRVIVENEEQVELSFMRMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQ+VMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSCENKDLKVHGWICTNPPTGFW ITPSDEFRSGGPLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGP+F YLNSTSVGDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRG+VRGRLLV DRY+  DYLPASGAFVG+SAPGEVGSWQRECKGYQFWTRADDGGYFTINH HTGDYN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LY+WVPGF+GDYRC ALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNP HINKLFVNHPDRFRQYGLWDRYAELYP+EDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY+KDWFFAQVPRKT SNSHEGTTWQI+F L RV  KSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHG+ GIYWLYSVGV GCH
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT
        LVEG+N IFLTQPRCTSPFQGIMYDYIRLEGPPT
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJQ9 Rhamnogalacturonan endolyase

0.0e+00

91.65

Show/hide

Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSSR+ VRLQIRDHHVVVDNGILQLTLSKPDGIITG+RYNGVDNLLEVLNPESNRG                 IKGS FRVIVENEEQVELSF+RMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNP LKGE
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGP+FLYLNSTSVGDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEV+SWPYSFPASEDFPK DQRGIV GRLLVFDRY+D DYLPA GAFVGLSAPGE GSWQRECKGYQFWTRADDGGYFTINH+HTG+YN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LYAWVPGF+GDYRC ALINV+QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFV+HPDRFRQYGLW+RYAELYP+EDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY KDWFFA VPRKTN NSHEGTTWQI+FKL+RVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHG+ GIYW+Y VGVAGCH
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK
        LVEG+N IFLTQPRCTSPFQGIMYDYIRLEGPPTK
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK

A0A1S3CQJ4 Rhamnogalacturonan endolyase

0.0e+00

90.87

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Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSS++ VRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG                 IKGS F VIVENEEQVELSF+RMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGE
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGP+FLYLNSTSVGDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEVESWPYSFPASEDF K DQRG+V GRLLVFDRY+D DYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+ TGDYN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LYAWVPGF+GDYRC AL+NV+QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPI+INKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY KDWFFA VPRKTNSNSHEGTTWQI+F+L+RVD KSMY LRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHG+ GIYW+YSV VAGCH
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK
        LVEG+N IFLTQPRCTSPFQGIMYDYIRLEGPPTK
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK

A0A5D3E6J1 Rhamnogalacturonan endolyase

0.0e+00

90.87

Show/hide

Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSS++ VRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG                 IKGS F VIVENEEQVELSF+RMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLT+PKN  LKGE
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSCEN +LKVHGWI TNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLS HYAGQDLVPKFRAGEPWKKVFGP+FLYLNSTSVGDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEVESWPYSFPASEDF K DQRG+V GRLLVFDRY+D DYLP SGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINH+ TGDYN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LYAWVPGF+GDYRC AL+NV+QGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPI+INKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY KDWFFA VPRKTNSNSHEGTTWQI+F+L+RVD KSMY LRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHG+ GIYW+YSV VAGCH
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK
        LVEG+N IFLTQPRCTSPFQGIMYDYIRLEGPPTK
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK

A0A6J1FQM1 Rhamnogalacturonan endolyase

0.0e+00

87.85

Show/hide

Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSSR GVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG                 IKGSSFRVIVENEEQVELSF RMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQR+MPLPDDRLSGRCQTL +PEAVLLTNPKNPE + E
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSC+NKDLKVHGWI TNPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLSTHYAGQDLVPKFR GEPWKKVFGP+FLYLNST  GDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEV+SWPYSFPAS+DFPK+DQRG + GRLLVFDRYM  DYLPA GAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LYAWVPGF+GDYRC ALIN++QGS IE+GDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNP+HINKLFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY+KDWFFAQVPRKTN NSH+GTTW+I FKL+RVD K+ Y LRVAIASATLAELQ+RVNDP SKRPLFTSGLIGRDNSIARHG+ GIYWLYSVG+AG H
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT
        LVEGDN IF TQPRCTSPFQGIMYDYIRLE P T
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT

A0A6J1J0S6 Rhamnogalacturonan endolyase

0.0e+00

87.85

Show/hide

Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS
        MSSR GVRLQIRDHHVVVDNGILQLTLSKPDGIITGI YNGVDNLLEVLNPESNRG                 IKGSSFRVIVENEEQVELSF RMWDPS
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPS

Query:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE
        LEGK VPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQR+MPLPDDRLSGRCQTL +PEAVLLTNPKNPE + E
Subjt:  LEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGE

Query:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF
        VDDKYQYSCENKDLKVHGWI  NPP GFWQITPSDEFRSGGP KQSLTSHVGPTTLAIFLSTHYAGQDLVPKFR GEPWKKVFGP+FLYLNST  GDDPF
Subjt:  VDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPF

Query:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN
        WLWEDAKIQMMAEV+SWPYSFPAS++FPK+DQRG + GRLLVFDRYM  DYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADD GYF INH+H G YN
Subjt:  WLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYN

Query:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT
        LYAWVPGF+GDYRC ALIN++QGS IE+G+LVYEPPRDGPTLWEIGIPDRSASEFY+PDPNP+HINKLFVNHP+RFRQYGLW+RYAELYPDEDLVYTVGT
Subjt:  LYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGT

Query:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH
        SDY+KDWFFAQVPRKTN+NSH+GTTW+I FKL+RVD KS Y LRVAIASATLAELQVRVNDP SKRPLFTSGLIGRDNSIARHG+ GIYWLYSVG+AG H
Subjt:  SDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCH

Query:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT
        LVEGDN IF TQPRCTSPFQGIMYDYIRLEGP T
Subjt:  LVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT

SwissProt top hits

e value

%identity

Alignment

A5ABH4 Probable rhamnogalacturonate lyase B

2.6e-19

26.2

Show/hide

Query:  KYQYSCENKDLKVHGWIC----TNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDD
        KY +S   +D  VHG       +N  T G W +  + +   GGPL   LT  V        +S H+   +  P    G  + + FGP + + N    G  
Subjt:  KYQYSCENKDLKVHGWIC----TNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDD

Query:  PFWLWEDAKIQMMAEVESWPYSFPAS-----EDFPKVDQRGIVRGRL-LVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTIN
               +  + +A+  SW   F  S       +    QRG V+G++ L       +  L   G +        V S       YQ+W   DD G+F+++
Subjt:  PFWLWEDAKIQMMAEVESWPYSFPAS-----EDFPKVDQRGIVRGRL-LVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTIN

Query:  HIHTGDYNLYAWVPGFVGDY-RCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF---YVPDP-NPIHINKLFVNHPDRFRQYGLWDRYAE
        H+  G Y L  +  G  GD+ R G  +   + + I+     +E    G  +W +G PD+S+ EF      DP +P+H        P+    +G +D  ++
Subjt:  HIHTGDYNLYAWVPGFVGDY-RCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF---YVPDP-NPIHINKLFVNHPDRFRQYGLWDRYAE

Query:  LYPDEDLVYTVGTSDYTKD-----W-FFAQVPRKTNSNSHEGTTWQIEFKLERVD--HKSMYTLRVAIASATLA
         +PD  + YT+GTSD   D     W  F   P            W I F L   D   +S  TL + +A A  A
Subjt:  LYPDEDLVYTVGTSDYTKD-----W-FFAQVPRKTNSNSHEGTTWQIEFKLERVD--HKSMYTLRVAIASATLA

Q5AZ85 Rhamnogalacturonate lyase B

8.2e-21

22.12

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Query:  SRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPES-NRGI--------------KGSSFRVIVENEEQVELSFMRMWDPSLEGK
        +R+ +     D  +V++N  L+ T  K  G I  +  +G D     L P+S + GI                 S   + E  +  + +  +     L   
Subjt:  SRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPES-NRGI--------------KGSSFRVIVENEEQVELSFMRMWDPSLEGK

Query:  FVPLNID-KRFIVLR-GSSGFYSYAIYEHLKDWPDF--DIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNP---EL
        + P   + +++  LR G +GF+ ++   +  +   F  ++ E R  F+   D + ++  +D   +  PLP D      Q +       L N  +    + 
Subjt:  FVPLNID-KRFIVLR-GSSGFYSYAIYEHLKDWPDF--DIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNP---EL

Query:  KGEVDDKYQYSCENKDLKVHGWICTNPPT-----GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNS
          E   KY +S   +D  VHG       +     G W +  + +   GGPL   LT  V        +S H+   +  P    G  + + FGP F   N 
Subjt:  KGEVDDKYQYSCENKDLKVHGWICTNPPT-----GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNS

Query:  TSVGDDPFWLWEDAKIQMMAEVESWPYSFPAS-----EDFPKVDQRGIVRGRL-LVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDG
           G     L E           SW   F  S       +    QRG V+G + L  +    +  L   G +   ++             +Q+W   D  
Subjt:  TSVGDDPFWLWEDAKIQMMAEVESWPYSFPAS-----EDFPKVDQRGIVRGRL-LVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDG

Query:  GYFTINHIHTGDYNLYAWVPGFVGDY-RCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF-YVPDPNPIHINKLFVNHPDRFRQY-GLWD
        G F+I+ +  G Y L  +  G  GD+ R G ++   + + I+     ++P   G  +W +G PD+S+ EF +    +P H       HP  +  Y G +D
Subjt:  GYFTINHIHTGDYNLYAWVPGFVGDY-RCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEF-YVPDPNPIHINKLFVNHPDRFRQY-GLWD

Query:  RYAELYPDEDLVYTVGTSDYTKDW------FFAQVPRKTNSNSHEGTTWQIEFKL--ERVDHKSMYTLRVAIASATLAELQVRV---NDPRSKRPLFT--
          ++     D  Y +G SD   D+       F   P    + S+    W+I F L  +++  +   TL + +A A  A     V   ++P +  PL +  
Subjt:  RYAELYPDEDLVYTVGTSDYTKDW------FFAQVPRKTNSNSHEGTTWQIEFKL--ERVDHKSMYTLRVAIASATLAELQVRV---NDPRSKRPLFT--

Query:  -------SGLIGRDNS---IARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRCTSPFQG--------IMYDYIRLE
               + +IG D S   I R  V               L EG N++ L+ P   + ++         + YD +RLE
Subjt:  -------SGLIGRDNS---IARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRCTSPFQG--------IMYDYIRLE

Arabidopsis top hits

e value

%identity

Alignment

AT1G09880.1 Rhamnogalacturonate lyase family protein

3.3e-227

57.95

Show/hide

Query:  VDNGILQLTLSKPDGIITGIRYNGVDNLLE-VLNPESNRG----------------------IKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNID
        ++N  LQLTLS P+G +TGI+YNG+DN+L    N E +RG                      I+ +   VI +N+E++ELSF R W+ S     VP+NID
Subjt:  VDNGILQLTLSKPDGIITGIRYNGVDNLLE-VLNPESNRG----------------------IKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNID

Query:  KRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCEN
        KRF++L+ SSGFYSYAI+E L+ WP  ++   R+ FKL K KF YMA++D+RQR MP+PDDR+  R Q LAYPEAV L +P  PE KGEVDDKY+YS E+
Subjt:  KRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCEN

Query:  KDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWLWEDAKIQMM
        KD+KVHGWI TN   GFWQITPS+EFRS GPLKQ L SHVGPT LA+F STHY G DL+  F+ GE WKKVFGP+F+YLNS   G DP  LW +AK Q  
Subjt:  KDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWLWEDAKIQMM

Query:  AEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGD
         E E WPY+F AS+DFP  DQRG V GRLLV DR++  + +PA+G++VGL+APG+VGSWQRECKGYQFW++AD+ G F+IN++ +G YNLYA+ PGF+GD
Subjt:  AEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGD

Query:  YRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQ
        Y    + +++ GS I +GDLVYEPPRDG TLWEIG+PDRSA+EFY+PDPNP  +NKL++NH D++RQYGLW+RY+ELYPDED+VY V   DY+K+WFF Q
Subjt:  YRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQ

Query:  VPRKTNSNSHEGTTWQIEFKLE--RVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIF
        V RK  +  ++GTTWQI F+ +    +    + LR+A+A++ +AELQVRVND  +  PLF +  IGRDN+IARHG+ G+YWLYSV V    L  G+N I+
Subjt:  VPRKTNSNSHEGTTWQIEFKLE--RVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIF

Query:  LTQPRCTSPFQGIMYDYIRLEGP
        LTQ   TSPFQG+MYDYIRLE P
Subjt:  LTQPRCTSPFQGIMYDYIRLEGP

AT1G09890.1 Rhamnogalacturonate lyase family protein

4.7e-266

67.75

Show/hide

Query:  VDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNIDKRFIVL
        +DNGI ++TLSKPDGI+TGI YNG+DNLLEVLN E NRG                 IKGS+F VIV+NEEQ+ELSF R WDPS EGK VPLNIDKRF++L
Subjt:  VDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNIDKRFIVL

Query:  RGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVH
         GSSGFY+YAIYEHLK+WP F + ETRI FKLRK+KF YMAV D+RQR MPLPDDRL  R Q LAYPEAVLL NP   + KGEVDDKYQYSCENKD+ VH
Subjt:  RGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVH

Query:  GWICTNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGD-DPFWLWEDAKIQMMAEVE
        GWICT  P+ GFW ITPS E+R+GGP KQ+LTSHVGPT LA+F+S HY G+DLVPKF  GE WKKVFGP+F+YLNS++  D DP WLW+DAK QM  E E
Subjt:  GWICTNPPT-GFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGD-DPFWLWEDAKIQMMAEVE

Query:  SWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGDYRCG
        SWPYSFPAS+D+ K +QRG V GRLLV DRY+D D++ A+  +VGL+ PG  GSWQRECK YQFWTR D+ G+F I+ I  G YNLYAW+PGF+GDY+  
Subjt:  SWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGDYRCG

Query:  ALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQVPRK
         +I +  G  I + DLVY+PPR+G TLWEIG PDRSA+EFYVPDPNP +IN L+ NHPDRFRQYGLW+RYAELYPD+DLVY VG+SDY KDWF+AQV RK
Subjt:  ALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQVPRK

Query:  TNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRC
         ++ +++GTTWQI+F+L+ +D    YTLRVAIASAT +ELQ+RVN+  +  P+FTSGLIGRDNSIARHG+ G+YWL++V VAG  L+EG+N +FLTQPR 
Subjt:  TNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRC

Query:  TSPFQGIMYDYIRLEGP
        TSPFQGIMYDYIR E P
Subjt:  TSPFQGIMYDYIRLEGP

AT1G09910.1 Rhamnogalacturonate lyase family protein

1.5e-280

68.51

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Query:  SRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPSLE
        S  GV L + D +VV+DNGILQ+TLSKP GIITGI YNG+DN+LEV N E+NRG                 I G +FRVIVE EEQVE+SF+R WDPSLE
Subjt:  SRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG-----------------IKGSSFRVIVENEEQVELSFMRMWDPSLE

Query:  GKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVD
        GK++PLNIDKRFI+LRGSSG YSY IYEHLKDWP F++GETRI FKLRKDKF YMAVAD+R+R+MP PDD   GRCQTL Y EA LLT P +P L+GEVD
Subjt:  GKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVD

Query:  DKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWL
        DKYQYSCENKDL+VHGWI  +PP GFWQITPS+EFRSGGPLKQ+LTSHVGPTTLA+F STHYAG+ ++P+F  GEPWKKV+GP+F+YLNST+ GDDP  L
Subjt:  DKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWL

Query:  WEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLY
        W+DAKI+MMAEVE WPYSF AS+D+PK ++RG  RGRLL+ DR+++ D + A GA+VGL+ PG+ GSWQ ECKGYQFW  AD+ GYF+I ++  G+YNLY
Subjt:  WEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLY

Query:  AWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSD
        AWVP F+GDY  G ++ V  G  IEMGD+VYEPPRDGPTLWEIGIPDR ASEF++PDP+P  +N++ V+H DRFRQYGLW +Y ++YP++DLVYTVG SD
Subjt:  AWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSD

Query:  YTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLV
        Y +DWFFA VPRK   + HEGTTWQI F LE +D K+ Y LRVAIASATLAELQ+R+ND  + RPLFT+GLIGRDNSIARHG+ G+Y LY+V + G  LV
Subjt:  YTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLV

Query:  EGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT
        +GDN IFL QPRC  PFQGIMYDYIRLEGPP+
Subjt:  EGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPT

AT2G22620.1 Rhamnogalacturonate lyase family protein

3.4e-216

56.98

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Query:  VVVDNGILQLTLSKPDGIITGIRYNGVDNLLE------------VLNPESNR---GIKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNIDKRFIVL
        VVVDNGI+Q+T S P+G+ITGI+Y+G+DN+L+               PE  +    ++G+ F +I +NEEQ+E+SF R W  S  G  VPLN+DKR+I+ 
Subjt:  VVVDNGILQLTLSKPDGIITGIRYNGVDNLLE------------VLNPESNR---GIKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNIDKRFIVL

Query:  RGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVH
         G SG Y Y I E L+ WPD D+ + RI FKL   KF +MA++D+RQR MP   DR + +  +LAY EAVLLTNP NP  KGEVDDKY YS E+KD  VH
Subjt:  RGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVH

Query:  GWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWLWEDAKIQMMAEVESW
        GWI ++PP GFW ITPSDEFR GGP+KQ LTSH GP TL++F STHYAG+++   +R GEPWKKVFGP+  YLNS S  D    LW DAK QM AEV+SW
Subjt:  GWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWLWEDAKIQMMAEVESW

Query:  PYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGDYRCGAL
        PY F  SED+P   QRG + G+ L+ D Y+    +    AFVGL+  GE GSWQ E KGYQFWT+AD  G F I ++  G+Y+LYAW  GF+GDY+    
Subjt:  PYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGDYRCGAL

Query:  INVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNH-PDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQVPRKT
        I +  GS + +G LVYEPPR+GPTLWEIG+PDR+A EFY+PDP P  +NKL+VN   DRFRQYGLWDRYA+LYP  DLVYT+G SDY  DWFFA V R  
Subjt:  INVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNH-PDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQVPRKT

Query:  NSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRCT
         +++++ TTWQI F L+ V+    YTLR+A+ASA  +ELQ+R+NDP+S   +FT+G IG+DN+IARHG+ G+Y LYS+ VAG  L  GDN IFLTQ R  
Subjt:  NSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRPLFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRCT

Query:  SPFQGIMYDYIRLEGP
        +PFQGIMYDYIRLE P
Subjt:  SPFQGIMYDYIRLEGP

AT4G24430.1 Rhamnogalacturonate lyase family protein

6.0e-245

61.09

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Query:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG--------------------IKGSSFRVIVENEEQVELSFMRMW
        MS++  V+L +++ HVV+ NG +++T+SKPDG +TGI Y GVDNLLE  N + NRG                    IKG+SF V+VENEE VE+SF R W
Subjt:  MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRG--------------------IKGSSFRVIVENEEQVELSFMRMW

Query:  DPSLEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPEL
        D SL+    P+N+DKRFI+ +  +GFYSYAI+EHL +WP F++ +TRI +KLRKDKF+YMA+ADNRQR MPLP+DRL  R + LAYPEAVLL +P   E 
Subjt:  DPSLEGKFVPLNIDKRFIVLRGSSGFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPEL

Query:  KGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNS-TSVG
        KGEVDDKY+YS ENKDLKVHGWI  N   G WQI PS+EFRSGG  KQ+LTSHVGP +LA+FLS HYAG+D+V K +AG+ WKKVFGP+F YLN      
Subjt:  KGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNS-TSVG

Query:  DDPFWLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHT
         DP  LW+DAK QM+ EV+SWPY FPASEDFP  D+RG + GRLLV D+++  D+LPA+GAFVGL+ PGEVGSWQ E KGYQFWT AD  GYF IN I  
Subjt:  DDPFWLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYMDLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHT

Query:  GDYNLYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVY
        G+YNL  +V G++GDY+   LIN+  G  I++G++VYEPPRDGPT+WEIGIPDRSA+EF+VPDPNP +INKL++ HPDRFRQYGLW+RY ELYP EDLV+
Subjt:  GDYNLYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYVPDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVY

Query:  TVGTSDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKR--PLFTSGLIGRDNSIARHGVQGIYWLYSV
        T+G SDY KDWFFA V RK   ++++ TTWQI+FKLE V     Y +R+A+A+A +AELQVR+ND  +++  P+FT+G+IG DN+IARHG+ GIY LY+V
Subjt:  TVGTSDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKR--PLFTSGLIGRDNSIARHGVQGIYWLYSV

Query:  GVAGCHLVEGDNIIFLTQPRCTS-PFQGIMYDYIRLEGPP
         V    LVEGDN +FLTQ   T+  F G+MYDYIRLEGPP
Subjt:  GVAGCHLVEGDNIIFLTQPRCTS-PFQGIMYDYIRLEGPP

Sequences

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CDS sequence

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ATGTCATCCAGATCAGGCGTCCGATTGCAGATACGAGATCATCATGTGGTAGTGGATAATGGAATACTGCAACTAACCTTATCAAAACCTGATGGAATTATCACTGGCAT
ACGATATAATGGTGTTGACAATCTACTTGAAGTTCTTAATCCTGAATCTAATAGAGGGATTAAAGGGTCAAGTTTTAGGGTTATAGTGGAAAATGAGGAACAGGTCGAGC
TTTCTTTTATGAGGATGTGGGATCCCTCCCTTGAGGGCAAGTTTGTTCCTTTGAATATAGACAAAAGGTTCATAGTACTACGGGGTTCCTCTGGATTCTACTCTTATGCT
ATTTATGAGCACTTGAAGGATTGGCCAGATTTTGATATTGGTGAAACCAGGATCACTTTTAAACTTAGAAAAGACAAGTTTCAGTACATGGCTGTAGCTGACAATAGGCA
GAGAGTCATGCCTCTGCCCGATGATCGGTTATCTGGAAGATGCCAAACTTTGGCCTATCCTGAAGCTGTCTTGCTTACTAATCCCAAGAATCCTGAACTCAAGGGTGAGG
TGGATGACAAATACCAATACTCGTGTGAAAACAAAGACTTAAAGGTTCATGGATGGATATGCACCAATCCGCCCACCGGGTTTTGGCAGATTACTCCCAGTGATGAATTT
CGGTCAGGCGGGCCTCTTAAGCAAAGTCTAACATCACACGTGGGACCTACAACCCTTGCTATATTTCTTAGTACTCATTATGCGGGACAAGATTTAGTGCCAAAATTTAG
AGCTGGTGAGCCATGGAAGAAAGTTTTTGGCCCTATTTTTCTCTATCTTAATTCCACCTCAGTTGGAGATGACCCATTTTGGTTATGGGAGGATGCTAAAATTCAGATGA
TGGCAGAAGTCGAAAGTTGGCCATATAGTTTCCCTGCATCTGAGGATTTCCCGAAAGTAGATCAACGGGGTATTGTTCGTGGTCGGCTACTGGTTTTTGACAGGTATATG
GATCTAGACTATCTTCCGGCCAGTGGAGCCTTCGTCGGATTGTCTGCACCAGGAGAAGTGGGGTCATGGCAGAGAGAATGCAAGGGATATCAATTCTGGACTAGAGCAGA
TGATGGTGGTTATTTTACCATCAACCACATACACACTGGCGACTATAATCTATATGCATGGGTCCCTGGCTTCGTTGGAGATTACCGTTGTGGTGCCCTCATCAACGTAA
ACCAAGGATCTTGTATTGAAATGGGCGATCTTGTATATGAACCTCCAAGAGATGGGCCTACACTATGGGAAATAGGCATTCCCGATCGCTCCGCATCTGAGTTCTATGTT
CCTGATCCTAATCCAATACATATTAATAAGCTCTTTGTCAATCATCCTGACAGGTTCCGGCAGTACGGGTTGTGGGACAGATATGCCGAATTATACCCGGACGAGGATTT
AGTATACACAGTTGGCACAAGTGACTATACCAAAGATTGGTTCTTTGCTCAGGTCCCTAGGAAGACAAACAGTAATTCACATGAAGGAACTACTTGGCAAATCGAATTCA
AACTTGAGAGAGTGGATCACAAGAGTATGTATACACTACGGGTTGCAATTGCATCTGCTACTCTTGCTGAATTGCAGGTCCGGGTAAATGATCCGAGATCGAAGCGACCT
TTGTTTACAAGCGGATTGATAGGGAGAGACAATTCAATTGCAAGACATGGAGTTCAAGGAATTTATTGGCTTTACAGCGTGGGCGTAGCAGGCTGTCATCTTGTTGAAGG
AGATAACATAATCTTCTTGACTCAGCCACGCTGCACCAGCCCTTTCCAGGGTATCATGTATGATTATATCCGTCTGGAAGGTCCTCCAACAAAGTGA

mRNA sequence

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Protein sequence

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MSSRSGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIRYNGVDNLLEVLNPESNRGIKGSSFRVIVENEEQVELSFMRMWDPSLEGKFVPLNIDKRFIVLRGSSGFYSYA
IYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRVMPLPDDRLSGRCQTLAYPEAVLLTNPKNPELKGEVDDKYQYSCENKDLKVHGWICTNPPTGFWQITPSDEF
RSGGPLKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRAGEPWKKVFGPIFLYLNSTSVGDDPFWLWEDAKIQMMAEVESWPYSFPASEDFPKVDQRGIVRGRLLVFDRYM
DLDYLPASGAFVGLSAPGEVGSWQRECKGYQFWTRADDGGYFTINHIHTGDYNLYAWVPGFVGDYRCGALINVNQGSCIEMGDLVYEPPRDGPTLWEIGIPDRSASEFYV
PDPNPIHINKLFVNHPDRFRQYGLWDRYAELYPDEDLVYTVGTSDYTKDWFFAQVPRKTNSNSHEGTTWQIEFKLERVDHKSMYTLRVAIASATLAELQVRVNDPRSKRP
LFTSGLIGRDNSIARHGVQGIYWLYSVGVAGCHLVEGDNIIFLTQPRCTSPFQGIMYDYIRLEGPPTK

HG10013426 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome