CuGenDBv2

Gene ID	HG10013455
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Genome location	Chr02:1684029..1688211
RNA-Seq Expression	HG10013455
Synteny	HG10013455
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0015031 - protein transport (biological process) GO:0005634 - nucleus (cellular component) GO:0030173 - integral component of Golgi membrane (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR000727 - Target SNARE coiled-coil homology domain IPR039897 - BET1-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

KGN60384.2 hypothetical protein Csa_001559 [Cucumis sativus]

1.6e-40

93.94

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV-FCLVAANDID
        MASSSFRGGSSFYNG+AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV FCLV ANDID
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV-FCLVAANDID

XP_004136265.1 bet1-like protein At1g29060 [Cucumis sativus]

3.7e-34

90.91

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MASSSFRGGSSFYNG+AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

XP_008466185.1 PREDICTED: bet1-like protein At1g29060 [Cucumis melo]

1.5e-35

93.18

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

XP_022940948.1 bet1-like protein At1g29060 [Cucurbita moschata]

4.9e-34

88.64

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MAS+S+RGGSSFYNG+AAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQL  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

XP_038896659.1 bet1-like protein At1g29060 [Benincasa hispida]

5.8e-35

93.18

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MASSSFRGGSSFYN NAA YRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHL4 t-SNARE coiled-coil homology domain-containing protein

1.8e-34

90.91

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MASSSFRGGSSFYNG+AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

A0A1S3CQM7 bet1-like protein At1g29060

7.3e-36

93.18

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

A0A5A7TAQ3 Bet1-like protein

7.3e-36

93.18

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MASSSFRGGSSFYNG+AAP+RSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQL  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

A0A6J1F6I9 bet1-like protein At4g14600

2.4e-34

84.38

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSVFCLVAAND
        MASSSFRGGSSFYNGNAAPYRSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIA DIGTEAK Q DFLDQL  T +       D
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSVFCLVAAND

A0A6J1IFD8 bet1-like protein At1g29060

2.4e-34

84.38

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSVFCLVAAND
        MASSSFRGGSSFYNGNAAPYRSREGLSTR AAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIA DIGTEAK Q DFLDQL  T +       D
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSVFCLVAAND

SwissProt top hits

e value

%identity

Alignment

Q8L9S0 Bet1-like protein At1g29060

1.4e-23

65.91

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+NIAQ+IG+EAKSQ+DFLD+L  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

Q8VXX9 Bet1-like protein At4g14600

1.8e-23

66.67

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Query:  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+NIAQ+IG+EAK Q+DFLD+L  T +
Subjt:  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

Arabidopsis top hits

e value

%identity

Alignment

AT1G29060.1 Target SNARE coiled-coil domain protein

9.8e-25

65.91

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Query:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MAS+   GGS +  G A PYRSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+NIAQ+IG+EAKSQ+DFLD+L  T +
Subjt:  MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

AT4G14600.1 Target SNARE coiled-coil domain protein

1.3e-24

66.67

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Query:  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV
        MAS+  R G+  S Y G AAPYRSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+NIAQ+IG+EAK Q+DFLD+L  T +
Subjt:  MASSSFRGGS--SFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSV

Sequences

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CDS sequence

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ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCTTTCTACAATGGCAACGCCGCCCCATATCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCCGCATCCGATGAAAT
TCAACTTCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAATATTGCTCAAGACATTGGGACAGAAGCAA
AGTCTCAGCAAGATTTTCTAGATCAGTTGATTCAAACTTCTGTTTTCTGTCTTGTTGCAGCAAATGACATTGATTAA

mRNA sequence

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Protein sequence

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MASSSFRGGSSFYNGNAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLIQTSVFCLVAANDID

HG10013455 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome