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HG10013462 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013462
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncircumsporozoite protein-like
Genome locationChr02:1728988..1729533
RNA-Seq ExpressionHG10013462
SyntenyHG10013462
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5444827.1 hypothetical protein F2P56_033926 [Juglans regia]3.0e-0553.04Show/hide
Query:  DPETAILFTEAPLPWVEVGVGACAGGVEIEEVGP-GVITGDFEGA--VGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEA
        DP   ILFT APLP  E  VG   GG+ IE VG  G + G F G   V GAGGE+AGA AG  V V   GA  +   D  G E  GV   GGG   GEEA
Subjt:  DPETAILFTEAPLPWVEVGVGACAGGVEIEEVGP-GVITGDFEGA--VGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEA

Query:  GGDLVGEEAGAAPGA
        GGDLV    GAAPGA
Subjt:  GGDLVGEEAGAAPGA

KGN60236.1 hypothetical protein Csa_001434 [Cucumis sativus]2.8e-4377.03Show/hide
Query:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG
        MIDPETAILFT+APLP V+VG GA AGG E+EE G GVI G+ EGAVGGAGGE AGA AGGEV V+G GA PDGAR ED    GGVATVGGGAD GEEAG
Subjt:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG

Query:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVV-KNAKSRERK
         DLVGEEAGAAPGAWPRE  IKAKRT KTKAEEEA+VV KN K RE++
Subjt:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVV-KNAKSRERK

XP_022136125.1 circumsporozoite protein-like [Momordica charantia]7.9e-3868.18Show/hide
Query:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG
        MIDP  A LF  APLP VE G GAC GG  IE  G GV  G+ EGAVGGAGGE AGA+AGGEVPVEG G  P GA DEDGV+AGGVAT  GGA FG++AG
Subjt:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG

Query:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRE----RKMEG
        G LVGEEAGAAPGAWP+EP  KA  TK TKA EEA+ VKNA+ RE    R+ EG
Subjt:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRE----RKMEG

XP_023520820.1 uncharacterized protein LOC111784314 [Cucurbita pepo subsp. pepo]1.8e-0550Show/hide
Query:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVAT
        MID ET+ILFT  PLP VE G                      +GAV  A GE+ GA A GEVP++ EG  P GARD+DGVEAG VAT
Subjt:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVAT

TrEMBL top hitse value%identityAlignment
A0A0A0LJM1 Uncharacterized protein1.4e-4377.03Show/hide
Query:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG
        MIDPETAILFT+APLP V+VG GA AGG E+EE G GVI G+ EGAVGGAGGE AGA AGGEV V+G GA PDGAR ED    GGVATVGGGAD GEEAG
Subjt:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG

Query:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVV-KNAKSRERK
         DLVGEEAGAAPGAWPRE  IKAKRT KTKAEEEA+VV KN K RE++
Subjt:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVV-KNAKSRERK

A0A6J1C301 circumsporozoite protein-like3.8e-3868.18Show/hide
Query:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG
        MIDP  A LF  APLP VE G GAC GG  IE  G GV  G+ EGAVGGAGGE AGA+AGGEVPVEG G  P GA DEDGV+AGGVAT  GGA FG++AG
Subjt:  MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAG

Query:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRE----RKMEG
        G LVGEEAGAAPGAWP+EP  KA  TK TKA EEA+ VKNA+ RE    R+ EG
Subjt:  GDLVGEEAGAAPGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRE----RKMEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCATGGGTTGAGGTCGGCGTAGGAGCCTGTGCTGGAGGAGTTGAGATCGAAGAAGTTGGACCTGG
AGTGATCACTGGTGACTTCGAAGGAGCAGTAGGTGGAGCCGGTGGAGAAGTAGCCGGCGCCAAAGCTGGTGGTGAAGTTCCGGTGGAAGGAGAGGGAGCCGCGCCCGATG
GAGCAAGGGATGAAGACGGAGTGGAAGCCGGAGGAGTCGCCACTGTGGGTGGAGGAGCCGATTTCGGCGAGGAGGCTGGCGGCGACTTGGTTGGAGAAGAGGCCGGTGCG
GCGCCCGGAGCTTGGCCAAGAGAGCCGACGATCAAAGCTAAGAGGACGAAGAAGACAAAGGCGGAGGAGGAAGCCATAGTGGTGAAGAATGCGAAGAGCAGAGAGAGGAA
GATGGAAGGGAAGTTTGAGTTGCAGAGGTTGAAGATGAGAGAAAAGGAGGGTTCTACAATGGCTTATACTTATATACTTATAAATATATATTTATATATAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCATGGGTTGAGGTCGGCGTAGGAGCCTGTGCTGGAGGAGTTGAGATCGAAGAAGTTGGACCTGG
AGTGATCACTGGTGACTTCGAAGGAGCAGTAGGTGGAGCCGGTGGAGAAGTAGCCGGCGCCAAAGCTGGTGGTGAAGTTCCGGTGGAAGGAGAGGGAGCCGCGCCCGATG
GAGCAAGGGATGAAGACGGAGTGGAAGCCGGAGGAGTCGCCACTGTGGGTGGAGGAGCCGATTTCGGCGAGGAGGCTGGCGGCGACTTGGTTGGAGAAGAGGCCGGTGCG
GCGCCCGGAGCTTGGCCAAGAGAGCCGACGATCAAAGCTAAGAGGACGAAGAAGACAAAGGCGGAGGAGGAAGCCATAGTGGTGAAGAATGCGAAGAGCAGAGAGAGGAA
GATGGAAGGGAAGTTTGAGTTGCAGAGGTTGAAGATGAGAGAAAAGGAGGGTTCTACAATGGCTTATACTTATATACTTATAAATATATATTTATATATAATATAA
Protein sequenceShow/hide protein sequence
MIDPETAILFTEAPLPWVEVGVGACAGGVEIEEVGPGVITGDFEGAVGGAGGEVAGAKAGGEVPVEGEGAAPDGARDEDGVEAGGVATVGGGADFGEEAGGDLVGEEAGA
APGAWPREPTIKAKRTKKTKAEEEAIVVKNAKSRERKMEGKFELQRLKMREKEGSTMAYTYILINIYLYII