CuGenDBv2

Gene ID	HG10013495
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Genome location	Chr02:2054347..2056036
RNA-Seq Expression	HG10013495
Synteny	HG10013495
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR002885 - Pentatricopeptide repeat IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7024539.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.2e-63

48.77

Show/hide

Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA+   +VLALA+         LQ+ HY    RR       F S+DPS SI NPL+LRL+QEP+SSVKSVLDS +NAFL SSR S  ALV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------
        KAQL LEW+      ENE+                                                                                 
Subjt:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------

Query:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         K+AFEFS DLRTYEALIHGSVKSKCFDFAV+CF+EMM+S IVPN IIL+NMLEGF +RK+LDE+KKFL VVLDKGWEINWNVV
Subjt:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKS
        EKFIPIWFESGE EGMEEIL KL+++
Subjt:  EKFIPIWFESGELEGMEEILAKLDKS

XP_004136433.1 pentatricopeptide repeat-containing protein At1g12775, mitochondrial [Cucumis sativus]

9.5e-73

53.52

Show/hide

Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VLALAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLNALV SLISSS  K
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------
        KAQLVLEWK                                                                              F  N  T      
Subjt:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------

Query:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         KKAFEFSPDLRTYEALIHGSVKS CFDF VKCFEEM++SDIVPNTIILENMLEG  +RKN DEVKKFLNVVLD GWEI+WNVV
Subjt:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKSN
        EKFIP+WFESGELEGM+EIL KL+K N
Subjt:  EKFIPIWFESGELEGMEEILAKLDKSN

XP_008466249.1 PREDICTED: pentatricopeptide repeat-containing protein At3g09060-like [Cucumis melo]

2.4e-76

54.38

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Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VL LAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLN LV SLISSS PK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------
        KAQLVLEWK                                                                              F  N  T      
Subjt:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------

Query:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMM+SDIVPN IILENMLEG  +RKN DEVKKFLNVVLD GWEINWNVV
Subjt:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKSNSALD
        EKFIP+WFESGELEGM+EIL K++KSNSA D
Subjt:  EKFIPIWFESGELEGMEEILAKLDKSNSALD

XP_023534997.1 pentatricopeptide repeat-containing protein At1g02060, chloroplastic-like [Cucurbita pepo subsp. pepo]

4.4e-62

48.16

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Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA+   +VLALA+          Q+AHY    RR       F S+DPS SI NP +LRL+QEP+SSVKSVLDS +NAFL +SR S  ALV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------
        KAQL LEW+      ENE+                                                                                 
Subjt:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------

Query:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         K+AFEFS DLRTYEALIHGSVKSKCFDFAV+CF+EMM+S IVPN IIL+NMLEGF +RK+LDE+KKFL VVLDKGWEINWNVV
Subjt:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKS
        EKFIPIWFESGE EGMEEIL KL+++
Subjt:  EKFIPIWFESGELEGMEEILAKLDKS

XP_038897030.1 pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Benincasa hispida]

7.5e-78

55.72

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Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MALTGK+VLALA S       +LQQAH+ L FRR       F S+DPS  ISNPLLLRLLQEPTSSVKSVLDSQ+NAFLCSSR S N LV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------
        KAQLVLEWK      ENE+                                                                                 
Subjt:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------

Query:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         KKAF FSPDLRTYEALIHGSVKSKCFDFAVKCFEEMM+S IVPNTIILENMLEG  +RKNLDEVKKFLNVVLDKGWEINWNVV
Subjt:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKSNSALDG
         KF PIWFESGELEGMEEIL K++KSNSA++G
Subjt:  EKFIPIWFESGELEGMEEILAKLDKSNSALDG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJI4 Uncharacterized protein

4.6e-73

53.52

Show/hide

Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VLALAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLNALV SLISSS  K
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------
        KAQLVLEWK                                                                              F  N  T      
Subjt:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------

Query:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         KKAFEFSPDLRTYEALIHGSVKS CFDF VKCFEEM++SDIVPNTIILENMLEG  +RKN DEVKKFLNVVLD GWEI+WNVV
Subjt:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKSN
        EKFIP+WFESGELEGM+EIL KL+K N
Subjt:  EKFIPIWFESGELEGMEEILAKLDKSN

A0A1S3CS56 pentatricopeptide repeat-containing protein At3g09060-like

1.2e-76

54.38

Show/hide

Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VL LAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLN LV SLISSS PK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------
        KAQLVLEWK                                                                              F  N  T      
Subjt:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------

Query:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMM+SDIVPN IILENMLEG  +RKN DEVKKFLNVVLD GWEINWNVV
Subjt:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKSNSALD
        EKFIP+WFESGELEGM+EIL K++KSNSA D
Subjt:  EKFIPIWFESGELEGMEEILAKLDKSNSALD

A0A5D3E5Z9 Pentatricopeptide repeat-containing protein

1.2e-76

54.38

Show/hide

Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA TGK+VL LAR+       + QQ HY L FR        FFS+DPSISI+NPLLL+LLQEPTSSVKSVLDSQ+N FLCSSR SLN LV SLISSS PK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------
        KAQLVLEWK                                                                              F  N  T      
Subjt:  KAQLVLEWK------------------------------------------------------------------------------FGENEQT------

Query:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMM+SDIVPN IILENMLEG  +RKN DEVKKFLNVVLD GWEINWNVV
Subjt:  -----------------KKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKSNSALD
        EKFIP+WFESGELEGM+EIL K++KSNSA D
Subjt:  EKFIPIWFESGELEGMEEILAKLDKSNSALD

A0A6J1FC94 pentatricopeptide repeat-containing protein At1g63080, mitochondrial-like isoform X1

1.0e-56

46.56

Show/hide

Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA+   +VLALA+         LQ+ HY    RR       F S+DPS SI NPL+LRL+QEP+SSVKSVLDS +NAFL SS  S  ALV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------
        KAQL LEW+      ENE+                                                                                 
Subjt:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------

Query:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                          +AFEFS DLRTYEALIHGSVKSKCFDFAV+CF+EMM+S IVPN IIL+NMLEGF +RK+LDE+KKFL VVLDKGWEINWNVV
Subjt:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEIL
        EKFIPIWFESG  +G    L
Subjt:  EKFIPIWFESGELEGMEEIL

A0A6J1II25 pentatricopeptide repeat-containing protein At2g37230-like isoform X1

6.2e-62

48.16

Show/hide

Query:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK
        MA+   +VLALA+         LQ+AHY    RR       F S+DPS SI NPL+LRL+QEP+SSVKSVLDS +N FL SSR S  ALV SLISSSSPK
Subjt:  MALTGKKVLALARS-------ELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPK

Query:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------
        KAQL LEW+      ENE+                                                                                 
Subjt:  KAQLVLEWKF----GENEQ---------------------------------------------------------------------------------

Query:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV
                         K+AFEFS DLRTYEALIHGSV SKCFDFAV+CF+EMM+S IVPN IIL+NMLEGF +RK+LDE+KKFL VVLDKGWEI WNVV
Subjt:  ----------------TKKAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVV

Query:  EKFIPIWFESGELEGMEEILAKLDKS
        EKFIPIWFESGE EGMEEIL KL+++
Subjt:  EKFIPIWFESGELEGMEEILAKLDKS

SwissProt top hits

e value

%identity

Alignment

Q0WKV3 Pentatricopeptide repeat-containing protein At1g12300, mitochondrial

6.7e-05

25.23

Show/hide

Query:  PDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLD
        P++RT+  LI+G  K+   D  ++ F +M +  +V +T+    +++GF     L+  K+    ++ +    N    +  +    ++GE E   EI  K++
Subjt:  PDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLD

Query:  KSNSALD
        KS   LD
Subjt:  KSNSALD

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial

6.7e-05

27.36

Show/hide

Query:  PDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLD
        PD+ TY  LI+   K+K  D  ++ F E+    ++PNTI    ++ GF +   L+  K+    ++ +G   +       +    ++GEL    EI  K+ 
Subjt:  PDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLD

Query:  KSNSAL
        KS   L
Subjt:  KSNSAL

Q9M302 Pentatricopeptide repeat-containing protein At3g48810

6.1e-06

Show/hide

Query:  SPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKL
        SP++RTY +LI+G  K    D AV  + +M+ S   PN ++  NM+E   R     E +  + ++  +    +      FI    ++G L+  E++  ++
Subjt:  SPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKL

Query:  DKSN
        ++ +
Subjt:  DKSN

Q9SX45 Pentatricopeptide repeat-containing protein At1g50270

3.9e-05

28.7

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Query:  EQTKKAFEFSP--DLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGE
        +  +K F+  P  ++ T+ ALI G V+S+CFD  +  FEEM+ SD+ PN   L ++L        L   ++    ++    EIN       I ++ + G 
Subjt:  EQTKKAFEFSP--DLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGE

Query:  LEGMEEILAKLDKSN
        LE    +  +L + N
Subjt:  LEGMEEILAKLDKSN

Q9ZUA2 Pentatricopeptide repeat-containing protein At2g01740

2.3e-05

28.16

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Query:  TYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNS
        TY ALI G  K      A + +  M+   + PN+++   +++GFF+R + D   KFL  +L++G  ++       I     +G+L+   EI+  ++KS+ 
Subjt:  TYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNS

Query:  ALD
          D
Subjt:  ALD

Arabidopsis top hits

e value

%identity

Alignment

AT1G12300.1 Tetratricopeptide repeat (TPR)-like superfamily protein

4.8e-06

25.23

Show/hide

Query:  PDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLD
        P++RT+  LI+G  K+   D  ++ F +M +  +V +T+    +++GF     L+  K+    ++ +    N    +  +    ++GE E   EI  K++
Subjt:  PDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLD

Query:  KSNSALD
        KS   LD
Subjt:  KSNSALD

AT1G50270.1 Pentatricopeptide repeat (PPR) superfamily protein

2.8e-06

28.7

Show/hide

Query:  EQTKKAFEFSP--DLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGE
        +  +K F+  P  ++ T+ ALI G V+S+CFD  +  FEEM+ SD+ PN   L ++L        L   ++    ++    EIN       I ++ + G 
Subjt:  EQTKKAFEFSP--DLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGE

Query:  LEGMEEILAKLDKSN
        LE    +  +L + N
Subjt:  LEGMEEILAKLDKSN

AT1G63630.1 Tetratricopeptide repeat (TPR)-like superfamily protein

9.6e-07

32.39

Show/hide

Query:  EFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKG
        + +PD+ T+ ALI+  VK +    A + ++EM+   I P TI   +M++GF ++  +D+ K+ L+ +  KG
Subjt:  EFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKG

AT2G01740.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.6e-06

28.16

Show/hide

Query:  TYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNS
        TY ALI G  K      A + +  M+   + PN+++   +++GFF+R + D   KFL  +L++G  ++       I     +G+L+   EI+  ++KS+ 
Subjt:  TYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNS

Query:  ALD
          D
Subjt:  ALD

AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein

4.3e-07

Show/hide

Query:  SPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKL
        SP++RTY +LI+G  K    D AV  + +M+ S   PN ++  NM+E   R     E +  + ++  +    +      FI    ++G L+  E++  ++
Subjt:  SPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKL

Query:  DKSN
        ++ +
Subjt:  DKSN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTAACTGGAAAAAAGGTTTTGGCATTGGCCAGAAGCGAGTTACAGCAAGCTCATTATGGACTTAGTTTCCGGAGATTCTTTTCATTCTTTCCTTCCTTCTTTTC
CTCTGATCCCTCGATTTCTATTTCGAATCCTCTGCTTCTCAGGTTGCTTCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGAAAAATGCTTTTCTCTGTA
GTTCCCGTTTTTCCTTGAATGCCCTCGTTGCGTCTCTTATATCTTCTTCGTCGCCTAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTTGGAGAAAATGAGCAAACCAAA
AAGGCGTTTGAATTCTCTCCTGACCTTCGAACTTATGAAGCTCTTATACATGGTAGTGTGAAATCAAAATGCTTTGACTTTGCTGTTAAATGTTTTGAGGAAATGATGAT
ATCTGACATTGTGCCCAACACAATCATATTGGAGAATATGCTTGAAGGGTTCTTTAGGAGGAAAAATTTGGATGAAGTGAAGAAGTTCTTAAATGTTGTGCTTGACAAAG
GATGGGAGATCAATTGGAATGTGGTAGAGAAATTCATTCCAATATGGTTTGAATCTGGGGAGTTGGAAGGGATGGAGGAGATCCTTGCCAAGCTAGATAAATCGAATTCG
GCTCTCGATGGCAGATCGACATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MALTGKKVLALARSELQQAHYGLSFRRFFSFFPSFFSSDPSISISNPLLLRLLQEPTSSVKSVLDSQKNAFLCSSRFSLNALVASLISSSSPKKAQLVLEWKFGENEQTK
KAFEFSPDLRTYEALIHGSVKSKCFDFAVKCFEEMMISDIVPNTIILENMLEGFFRRKNLDEVKKFLNVVLDKGWEINWNVVEKFIPIWFESGELEGMEEILAKLDKSNS
ALDGRST

HG10013495 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome