; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013535 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013535
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationChr02:2386693..2391706
RNA-Seq ExpressionHG10013535
SyntenyHG10013535
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]2.2e-13290.41Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS  GFTSSQT DSS+AK+RE PGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DTKQM+EIQDGMY+RVNGHLKIFQ+NKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDSI KT +QNGSSG QTASS +PSEQ
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+  LDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_004136317.1 replication protein A 32 kDa subunit A [Cucumis sativus]1.5e-13391.14Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSSTQFDSA GFTSSQTNDSS+AKSRE PGL+PVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DT QMEEIQDGMYVRVNGHLK+FQ+NKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNL G+GSTQ Q+SDSI KT VQNGS+G  T SS IPSEQ
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDE  LDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_008466326.1 PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo]3.0e-13492.25Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSSTQFDS  GFTSSQTNDSS+AKSRE PGLVPVTVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DTKQMEEIQDGMYVRVNGHLK+FQ+NKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNL GDGSTQ Q+SDSI KT VQNGSSG  T SS IPSEQ
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDE  LDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]8.8e-13491.14Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS  GFTSSQTNDSS+AK+RE PGLVP TVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DTKQM+EIQDGMY+RVNGHLKIFQ+NKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDSI KT +QNGSSG QTASS +PSEQ
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+  LDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

XP_038897330.1 replication protein A 32 kDa subunit A-like [Benincasa hispida]3.1e-13995.2Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFS TQFDSA GFTSSQTNDSS+AKSRE PGLVPVTVKQISEASHSGEEKANFV+NGVDITNV IVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DTKQMEEIQDGMYVRVNGHLKIFQ+NKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDG TQFQSSDSI KT VQNGSSG+QTASSGIPSEQ
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCDE  LDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein7.3e-13491.14Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSSTQFDSA GFTSSQTNDSS+AKSRE PGL+PVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DT QMEEIQDGMYVRVNGHLK+FQ+NKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNL G+GSTQ Q+SDSI KT VQNGS+G  T SS IPSEQ
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDE  LDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like1.5e-13492.25Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSSTQFDS  GFTSSQTNDSS+AKSRE PGLVPVTVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DTKQMEEIQDGMYVRVNGHLK+FQ+NKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNL GDGSTQ Q+SDSI KT VQNGSSG  T SS IPSEQ
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKK+CDE  LDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A7.0e-12185.61Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS  GFTSSQ  DS++AKSRE PGLVPVTVKQISEA HSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DTKQM++IQDGMY+RVNGHLKIFQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ LNG  STQ QSSDS    LVQ+GSSG QTASS + S Q
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKN D+  LDYLQLPSSVAKE+GIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like4.3e-13491.14Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS  GFTSSQTNDSS+AK+RE PGLVP TVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ
        DTKQM+EIQDGMY+RVNGHLKIFQ+NKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDSI KT +QNGSSG QTASS +PSEQ
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQ

Query:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        HTVDVKKNCD+  LDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  HTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like2.0e-13189.74Show/hide
Query:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS  GFT SQTNDSS+AK+RE PGLVP TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTAS--SGIPS
        DTKQM+EIQDGMY+RVNGHLKIFQ+NKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQNLNG GSTQFQSSDSI KT +QNGSSG QTAS  S +PS
Subjt:  DTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTAS--SGIPS

Query:  EQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        EQHTVDVKKNCD+  LDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  EQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C1.2e-2440.62Show/hide
Query:  SAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTK
        SA G  ++     S  +     G VP TV  IS +     +  G     F I+GV+ TNV ++G+V     R+TD+ FT+DD TG I   RW+ D  DT+
Subjt:  SAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEA-----SHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTK

Query:  QMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQ
            IQ+G+YV+V  +L  FQ  KQ  A S+RP+ NF+E+  HFIEC+H HL +  SK+Q
Subjt:  QMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQ

Q6H7J5 Replication protein A 32 kDa subunit B2.2e-4236.3Show/hide
Query:  GGFTSSQTNDSSTA---------KSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFD
        GGF  SQ  +++           KSR    L+P+TVKQI +AS + ++K+NF +NG++++ V +VG++  K +R TD++FT+DDGTG +   RW ND+ D
Subjt:  GGFTSSQTNDSSTA---------KSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFD

Query:  TKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN-LNGDGSTQFQSSDSIGKTLVQNGSS-GNQTASSGIPSE
        TK+M +IQ+G YV VNG LK FQ  +Q+ A+SVR +TNF+++T HF+ C+H HL  ++ ++ +N + +T   +      ++  N S   NQ ++   P  
Subjt:  TKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQN-LNGDGSTQFQSSDSIGKTLVQNGSS-GNQTASSGIPSE

Query:  QHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS
          T     N  +  L+    P+ +  + G+  D +S++L +P E +   I    D G +Y+TID+ H+KS
Subjt:  QHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A1.4e-4642.18Show/hide
Query:  FSSTQFDSAGGFTSSQ--TNDSST-AKSRELPGLVPVTVKQISEASHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRW
        FS     S   FTSSQ    DS+T +KSR     +P+TVKQISEA  S   GE+ A FV++GV+  NV +VG VS K ERNTD++FT+DDGTG +   RW
Subjt:  FSSTQFDSAGGFTSSQ--TNDSST-AKSRELPGLVPVTVKQISEASHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRW

Query:  VNDTFDTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSG
        VND  D+ +   +Q+GMYV V G LK  Q  K+  AF++RPVT+++E+T HFI+C+  HL N+K Q   G  +  + +  S         ++     S+ 
Subjt:  VNDTFDTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSG

Query:  IPSEQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSA
         P    T   K + +   L+  + P++V  E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KSA
Subjt:  IPSEQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B1.2e-4538.81Show/hide
Query:  SAGGFTSSQT-----NDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTK
        + GGF  SQ        SS+ K+R++  L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T+
Subjt:  SAGGFTSSQT-----NDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTK

Query:  QMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQHTV
        +ME ++ GMYVR++GHLKIFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  +    T          T+           S+  P++ +  
Subjt:  QMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQHTV

Query:  DVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        D      +  L+YL  P  +  E G+H D ++++L+IP+ ++  ++  L ++G IYST+DE  FKS A
Subjt:  DVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A1.5e-6749.47Show/hide
Query:  MFSSTQFD-----SAGGFTSSQ-----TNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT
        MFSS+QF+     S GGF SSQ      + SSTAK+R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTG 
Subjt:  MFSSTQFD-----SAGGFTSSQ-----TNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT

Query:  IGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGN
        I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q       TQ  +      T  Q GS+ N
Subjt:  IGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGN

Query:  QTA--SSGIPSEQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK
        Q    +  + S+ +  + +KN D+  LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTA--SSGIPSEQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A21.1e-6849.47Show/hide
Query:  MFSSTQFD-----SAGGFTSSQ-----TNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT
        MFSS+QF+     S GGF SSQ      + SSTAK+R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTG 
Subjt:  MFSSTQFD-----SAGGFTSSQ-----TNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT

Query:  IGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGN
        I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q       TQ  +      T  Q GS+ N
Subjt:  IGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGN

Query:  QTA--SSGIPSEQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK
        Q    +  + S+ +  + +KN D+  LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTA--SSGIPSEQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A21.1e-6849.47Show/hide
Query:  MFSSTQFD-----SAGGFTSSQ-----TNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT
        MFSS+QF+     S GGF SSQ      + SSTAK+R+  GLVPVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTG 
Subjt:  MFSSTQFD-----SAGGFTSSQ-----TNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT

Query:  IGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGN
        I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q       TQ  +      T  Q GS+ N
Subjt:  IGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGN

Query:  QTA--SSGIPSEQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK
        Q    +  + S+ +  + +KN D+  LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  QTA--SSGIPSEQHTVDVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA328.7e-4738.81Show/hide
Query:  SAGGFTSSQT-----NDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTK
        + GGF  SQ        SS+ K+R++  L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T+
Subjt:  SAGGFTSSQT-----NDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTK

Query:  QMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQHTV
        +ME ++ GMYVR++GHLKIFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  +    T          T+           S+  P++ +  
Subjt:  QMEEIQDGMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQHTV

Query:  DVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
        D      +  L+YL  P  +  E G+H D ++++L+IP+ ++  ++  L ++G IYST+DE  FKS A
Subjt:  DVKKNCDEWFLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA322.1e-4538.8Show/hide
Query:  STAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK
        S+ ++R++  L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T++ME ++ GMYVR++GHLK
Subjt:  STAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK

Query:  IFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQHTVDVKKNCDEWFLDYLQLPS
        IFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  +    T          T+           S+  P++ +  D      +  L+YL  P 
Subjt:  IFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQHTVDVKKNCDEWFLDYLQLPS

Query:  SVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA
         +  E G+H D ++++L+IP+ ++  ++  L ++G IYST+DE  FKS A
Subjt:  SVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCAGTACCCAGTTTGATTCCGCCGGCGGATTTACGTCTTCGCAGACCAATGACTCATCTACAGCGAAGAGTCGAGAATTGCCGGGCTTGGTTCCGGTAACTGT
AAAACAGATAAGTGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGCGTTGACATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTG
AAAGGAATACGGACATCACATTCACTGTAGATGATGGAACAGGAACAATTGGATGCAAAAGATGGGTAAACGACACTTTTGACACTAAGCAAATGGAGGAAATACAAGAT
GGAATGTATGTACGGGTGAACGGGCATTTGAAAATATTTCAAAATAACAAGCAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATTACCTTCCACTT
TATTGAATGCATACACGACCACTTACGGAATTCCAAGTTACAGAATCTCAATGGCGATGGATCGACACAGTTCCAATCCTCAGATTCAATTGGGAAGACTCTAGTGCAGA
ATGGTTCGAGTGGAAATCAGACAGCATCTTCGGGAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAACTGTGATGAATGGTTTCTCGACTATCTGCAGCTGCCC
TCCAGCGTTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATTCTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTT
GATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCCAGTACCCAGTTTGATTCCGCCGGCGGATTTACGTCTTCGCAGACCAATGACTCATCTACAGCGAAGAGTCGAGAATTGCCGGGCTTGGTTCCGGTAACTGT
AAAACAGATAAGTGAAGCTTCACATTCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGGCGTTGACATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTG
AAAGGAATACGGACATCACATTCACTGTAGATGATGGAACAGGAACAATTGGATGCAAAAGATGGGTAAACGACACTTTTGACACTAAGCAAATGGAGGAAATACAAGAT
GGAATGTATGTACGGGTGAACGGGCATTTGAAAATATTTCAAAATAACAAGCAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGATGAAATTACCTTCCACTT
TATTGAATGCATACACGACCACTTACGGAATTCCAAGTTACAGAATCTCAATGGCGATGGATCGACACAGTTCCAATCCTCAGATTCAATTGGGAAGACTCTAGTGCAGA
ATGGTTCGAGTGGAAATCAGACAGCATCTTCGGGAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAACTGTGATGAATGGTTTCTCGACTATCTGCAGCTGCCC
TCCAGCGTTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATTCTGAACTCCATAAGGTCTCTTGAAGATGAAGGTTT
GATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAG
Protein sequenceShow/hide protein sequence
MFSSTQFDSAGGFTSSQTNDSSTAKSRELPGLVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQD
GMYVRVNGHLKIFQNNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLNGDGSTQFQSSDSIGKTLVQNGSSGNQTASSGIPSEQHTVDVKKNCDEWFLDYLQLP
SSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA