CuGenDBv2

Gene ID	HG10013552
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Polyamine-modulated factor 1-binding protein
Genome location	Chr02:2537285..2539159
RNA-Seq Expression	HG10013552
Synteny	HG10013552
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7024488.1 hypothetical protein SDJN02_13304 [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-32

79.44

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Query:  MATSESKPNDQLIPLPESESLP--ESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDML
        MA+SESKPNDQLIPLPESESLP  ESESESQLSVL+F  S            + SEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDML
Subjt:  MATSESKPNDQLIPLPESESLP--ESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDML

Query:  NNGGGTL
        NNGGGTL
Subjt:  NNGGGTL

XP_004136463.2 uncharacterized protein LOC101215419 [Cucumis sativus]

3.8e-31

80.58

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MATSESKPNDQLIPLPESESLP  ESESQLS LIF  S            + SEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGG
        GGG
Subjt:  GGG

XP_022937053.1 uncharacterized protein LOC111443468 [Cucurbita moschata]

4.8e-34

80.95

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKPNDQLIPLPESESLPESESESQLSVL+F  S            + SEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

XP_022976221.1 uncharacterized protein LOC111476676 [Cucurbita maxima]

4.5e-32

78.1

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKP DQLIPLPESESL ESESE+QLSVL+F  S            + SEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

XP_023535872.1 uncharacterized protein LOC111797169 [Cucurbita pepo subsp. pepo]

4.0e-33

79.05

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKPND LIPLPESESLPE+ESESQLSVL+F  S            + SEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJE0 Uncharacterized protein

1.8e-31

80.58

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MATSESKPNDQLIPLPESESLP  ESESQLS LIF  S            + SEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGG
        GGG
Subjt:  GGG

A0A1S3CR82 uncharacterized protein LOC103503784

5.9e-30

78.3

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MATSESKPNDQLIPLPE ESLP  E ESQLS LIF  S            + SEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  -GGGTL
         GGGTL
Subjt:  -GGGTL

A0A5A7TBQ0 Uncharacterized protein

5.9e-30

78.3

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MATSESKPNDQLIPLPE ESLP  E ESQLS LIF  S            + SEIDQNAVGIVEDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  -GGGTL
         GGGTL
Subjt:  -GGGTL

A0A6J1FEZ1 uncharacterized protein LOC111443468

2.3e-34

80.95

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKPNDQLIPLPESESLPESESESQLSVL+F  S            + SEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

A0A6J1IGC1 uncharacterized protein LOC111476676

2.2e-32

78.1

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKP DQLIPLPESESL ESESE+QLSVL+F  S            + SEIDQNAVGI+EDIEKCRGS+LDRKGVLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G25570.1 unknown protein

1.1e-12

41.75

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA S S+ + QL+    +   P  +++S L+ L+F  S            +  EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT+LDML+N
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGG
          G
Subjt:  GGG

AT5G25570.2 unknown protein

1.1e-12

41.75

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Query:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN
        MA S S+ + QL+    +   P  +++S L+ L+F  S            +  EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT+LDML+N
Subjt:  MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFS---------FSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNN

Query:  GGG
          G
Subjt:  GGG

AT5G25570.3 unknown protein

5.5e-12

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Query:  EIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG
        EIDQN+VGI E+IEK +  ++++K +LEEEK QFQ+AAYT+LDML+N  G
Subjt:  EIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGG

Sequences

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CDS sequence

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ATGGCAACTTCCGAATCAAAACCCAATGATCAGCTTATTCCCTTGCCGGAGTCTGAATCGCTGCCGGAATCTGAATCTGAATCGCAGCTCTCAGTTCTCATATTCGTCTT
CTCGTTTTCAACTGTTTGCAGTGAAATTGATCAAAACGCTGTTGGAATAGTGGAAGATATAGAGAAGTGCAGGGGTTCTTCTCTTGACAGGAAGGGGGTGCTAGAGGAAG
AGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAATGGAGGGGGAACGCTGTAA

mRNA sequence

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Protein sequence

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MATSESKPNDQLIPLPESESLPESESESQLSVLIFVFSFSTVCSEIDQNAVGIVEDIEKCRGSSLDRKGVLEEEKQQFQQAAYTVLDMLNNGGGTL

HG10013552 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome