; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013598 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013598
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationChr02:2898554..2901243
RNA-Seq ExpressionHG10013598
SyntenyHG10013598
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily
IPR039690 - U11/U12 small nuclear ribonucleoprotein 25kDa protein
IPR040610 - SNRNP25, ubiquitin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038816.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like [Cucumis melo var. makuwa]1.6e-13087.36Show/hide
Query:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK
        MAVD +C LDVV+FPP    TT +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQ+GPGK
Subjt:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK

Query:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR
        ISWLHVWWHFCLCY GQKL+DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS+KQNDQ+DMERYN  YNDIESGR QH 
Subjt:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR

Query:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
        GNN+LF+N +PKMV FLGGWFSHTKLASAGKMSI SL+RPS TRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Subjt:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV

XP_004136480.1 uncharacterized protein LOC101219460 [Cucumis sativus]1.6e-13589.89Show/hide
Query:  MAVDRICRLDVVEFPPL--PTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK
        MAVD +C LDVV+FPPL   TT +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGS FDIQV+RSATVAELKGAVE VFSHMPQ GPGK
Subjt:  MAVDRICRLDVVEFPPL--PTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK

Query:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRG-
        ISWLHVWWHFCLCYAGQKL+DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK VVSSKL+SRISSRSKS+KQNDQ+DMERYNYNDIESGR QH G 
Subjt:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRG-

Query:  -NNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
         NN+LFMNHEPKMV FLGGWFSHTKLASAGKMSI SL+RPS TRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
Subjt:  -NNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV

XP_008466420.1 PREDICTED: uncharacterized protein LOC103503833 [Cucumis melo]5.9e-13087Show/hide
Query:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK
        MAVD +C LDVV+FPP    TT +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQ+GPGK
Subjt:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK

Query:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR
        ISWLHVWWHFCLCY GQKL+DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS+KQNDQ+DMERYN  YNDIESGR QH 
Subjt:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR

Query:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
        GN++LF+N +PKMV FLGGWFSHTKLASAGKMSI SL+RPS TRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Subjt:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV

XP_022935765.1 uncharacterized protein LOC111442589 [Cucurbita moschata]3.7e-12485.93Show/hide
Query:  MAVDRICRLDVVEFPPLPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKIS
        MAVD   +LD    PP  TTV+K+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQ+GPGKIS
Subjt:  MAVDRICRLDVVEFPPLPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKIS

Query:  WLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRGNNE
        WLHVWW+FCLCYAGQKL+DD DYIANFGIKDGDQLQFVRHVTTGYNV+RKQSKK VVSSKLLSRISSRSKSYKQND+EDMERY YND ESGRFQH GNN 
Subjt:  WLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRGNNE

Query:  LFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSI
             EPK+V FLGGWFSHTK AS GK SINSL RPSG+RPSLVRGFKNLIQLCREKRHYEKVNK KRSI
Subjt:  LFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSI

XP_038899214.1 uncharacterized protein LOC120086568 [Benincasa hispida]4.7e-14392.42Show/hide
Query:  MAVDRICRLDVVEF----PPLPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGP
        MA+D +C LDVVEF    PP PTTV+KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQ+GP
Subjt:  MAVDRICRLDVVEF----PPLPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGP

Query:  GKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHR
        GKISWLHVWWHFCLCYAGQKL+DDADYIANFGIKDGDQLQFVRHVTTGYN IRKQSKKCVVSSKLLSRIS RSK+Y+QNDQEDMERYNYNDIESGRFQH 
Subjt:  GKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHR

Query:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
        GNNELFMNHEPKMV FLGGWFSHTKLASAGK  INSL+RPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
Subjt:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH97 Ubiquitin-like domain-containing protein7.8e-13689.89Show/hide
Query:  MAVDRICRLDVVEFPPL--PTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK
        MAVD +C LDVV+FPPL   TT +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGS FDIQV+RSATVAELKGAVE VFSHMPQ GPGK
Subjt:  MAVDRICRLDVVEFPPL--PTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK

Query:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRG-
        ISWLHVWWHFCLCYAGQKL+DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK VVSSKL+SRISSRSKS+KQNDQ+DMERYNYNDIESGR QH G 
Subjt:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRG-

Query:  -NNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
         NN+LFMNHEPKMV FLGGWFSHTKLASAGKMSI SL+RPS TRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
Subjt:  -NNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV

A0A1S3CR65 uncharacterized protein LOC1035038332.9e-13087Show/hide
Query:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK
        MAVD +C LDVV+FPP    TT +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQ+GPGK
Subjt:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK

Query:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR
        ISWLHVWWHFCLCY GQKL+DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS+KQNDQ+DMERYN  YNDIESGR QH 
Subjt:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR

Query:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
        GN++LF+N +PKMV FLGGWFSHTKLASAGKMSI SL+RPS TRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Subjt:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV

A0A5A7T9I3 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like7.6e-13187.36Show/hide
Query:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK
        MAVD +C LDVV+FPP    TT +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQ+GPGK
Subjt:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK

Query:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR
        ISWLHVWWHFCLCY GQKL+DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS+KQNDQ+DMERYN  YNDIESGR QH 
Subjt:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR

Query:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
        GNN+LF+N +PKMV FLGGWFSHTKLASAGKMSI SL+RPS TRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Subjt:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV

A0A5D3E6G8 U11/U12 small nuclear ribonucleoprotein 25 kDa protein-like2.9e-13087Show/hide
Query:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK
        MAVD +C LDVV+FPP    TT +KHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQV+RSATVAELKGAVE VFSHMPQ+GPGK
Subjt:  MAVDRICRLDVVEFPP--LPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGK

Query:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR
        ISWLHVWWHFCLCY GQKL+DDADYIA+FGIKDGDQLQFVRHVTTGYNVIRKQSKK  VSSKL+SRISSRSKS+KQNDQ+DMERYN  YNDIESGR QH 
Subjt:  ISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYN--YNDIESGRFQHR

Query:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV
        GN++LF+N +PKMV FLGGWFSHTKLASAGKMSI SL+RPS TRPSLV G KNLIQLCREKRHYEKVNKKKRSIIGV
Subjt:  GNNELFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV

A0A6J1FBK4 uncharacterized protein LOC1114425891.8e-12485.93Show/hide
Query:  MAVDRICRLDVVEFPPLPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKIS
        MAVD   +LD    PP  TTV+K+RRS SLLSSPLMIVGLS+KNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQ+GPGKIS
Subjt:  MAVDRICRLDVVEFPPLPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKIS

Query:  WLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRGNNE
        WLHVWW+FCLCYAGQKL+DD DYIANFGIKDGDQLQFVRHVTTGYNV+RKQSKK VVSSKLLSRISSRSKSYKQND+EDMERY YND ESGRFQH GNN 
Subjt:  WLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRGNNE

Query:  LFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSI
             EPK+V FLGGWFSHTK AS GK SINSL RPSG+RPSLVRGFKNLIQLCREKRHYEKVNK KRSI
Subjt:  LFMNHEPKMVFFLGGWFSHTKLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSI

SwissProt top hitse value%identityAlignment
Q3ZBQ4 U11/U12 small nuclear ribonucleoprotein 25 kDa protein1.7e-0732.22Show/hide
Query:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG---KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVR
        Q + + V K+DG    + V ++ATV +LK A++  +  + Q+  G    ISW +VW  + L  AG+KL +D   + ++GI++ D++ F++
Subjt:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG---KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVR

Q84WS8 U11/U12 small nuclear ribonucleoprotein 25 kDa protein6.8e-1241.57Show/hide
Query:  LMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG--KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHV
        + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL    +KLLDD   + + GI++  Q+ F+ +V
Subjt:  LMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG--KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHV

Q8VIK1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein1.3e-0732.22Show/hide
Query:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG---KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVR
        Q + + V K+DG    + V ++ATV +LK A++  +  + Q+  G    ISW +VW  + L  AG+KL +D   + ++GI++ D++ F++
Subjt:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG---KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVR

Q9BV90 U11/U12 small nuclear ribonucleoprotein 25 kDa protein6.0e-0833.33Show/hide
Query:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG---KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVR
        Q + + V K+DG    + V +SATV +LK A++  +  + Q+  G    ISW +VW  + L  AG+KL +D   + ++GI++ D++ F++
Subjt:  QPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG---KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVR

Arabidopsis top hitse value%identityAlignment
AT1G80060.1 Ubiquitin-like superfamily protein1.9e-2537.1Show/hide
Query:  LSRKNVLYRQLPHQ-PLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFV
        +S +   Y +LP Q  + LSV+KL+GS FD++V +  +VAELK AVE VF+  P +G G ISW HVW HFCLCY  Q+L++D   I   G+ DGDQL FV
Subjt:  LSRKNVLYRQLPHQ-PLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFV

Query:  RHVTTGYNVIRKQSKKCVVSSKLLSRISS-----RSKSYKQNDQEDMERYNYNDIESGRFQHRGNNELFMNHEPKMVFFLGGWFSH
        RH++  ++ + K+SK       L   +SS     + ++  QN  +D+    Y           G  +     E ++V  + GW  +
Subjt:  RHVTTGYNVIRKQSKKCVVSSKLLSRISS-----RSKSYKQNDQEDMERYNYNDIESGRFQHRGNNELFMNHEPKMVFFLGGWFSH

AT3G07860.1 Ubiquitin-like superfamily protein4.8e-1341.57Show/hide
Query:  LMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG--KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHV
        + LSV+KLDGS  D+ V  SAT+ +LK  ++   + M Q   G   ISW HVW +FCL    +KLLDD   + + GI++  Q+ F+ +V
Subjt:  LMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPG--KISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHV

AT4G32270.1 Ubiquitin-like superfamily protein2.9e-3447.2Show/hide
Query:  RRSFSLLSSPLMIV-GLSRKNVL-YRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCLCYAGQKLLDDAD
        RRS +   SPL ++ GL R+    Y Q+P +P+ L+VLKLDGS F IQV ++ATV ELK AVE+ FSH+P  GPGKISW HVW  FCL Y  ++L+++++
Subjt:  RRSFSLLSSPLMIV-GLSRKNVL-YRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCLCYAGQKLLDDAD

Query:  YIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKC--VVSSKLLSRISSRSKSYKQNDQEDME
        Y+  FGIKDGDQL+F+RH++    ++ K   K   V S K L   S+  ++ K+N   ++E
Subjt:  YIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKC--VVSSKLLSRISSRSKSYKQNDQEDME

AT4G32270.2 Ubiquitin-like superfamily protein3.1e-2847.01Show/hide
Query:  LPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIR
        +P +P+ L+VLKLDGS F   V ++ATV ELK AVE+ FSH+P  GPGKISW HVW  FCL Y  ++L+++++Y+  FGIKDGDQL+F+RH++    ++ 
Subjt:  LPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIR

Query:  KQSKKC--VVSSKLLSRISSRSKSYKQNDQEDME
        K   K   V S K L   S+  ++ K+N   ++E
Subjt:  KQSKKC--VVSSKLLSRISSRSKSYKQNDQEDME

AT5G25340.1 Ubiquitin-like superfamily protein1.6e-3246Show/hide
Query:  RKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHV
        R+   Y +LP++P+ LSVLKLDGS FD+ V  SATV +LK A+E+ FSH+P+ GP KISW HVW HFCLC+ GQKL+ D D I N+G+KDGD+++F  HV
Subjt:  RKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCLCYAGQKLLDDADYIANFGIKDGDQLQFVRHV

Query:  TTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESG
        +    + +  S+K     K L R+  +      N  E+++  +++D+E G
Subjt:  TTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCGACCGCATTTGCAGACTTGACGTTGTTGAATTTCCTCCGCTGCCAACGACGGTCCAGAAGCATCGCAGATCGTTCTCCCTGCTTTCGTCTCCTTTGATGAT
CGTTGGGCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCGCATCAGCCTCTCATGCTCTCTGTCCTTAAATTGGACGGCTCTTGTTTCGATATTCAAGTTAAGAGAT
CTGCTACAGTTGCTGAATTAAAGGGGGCAGTGGAGTCGGTCTTCAGCCACATGCCACAGGATGGACCAGGAAAGATTTCATGGCTCCATGTGTGGTGGCATTTCTGCTTA
TGCTATGCTGGTCAAAAGTTACTTGATGATGCGGACTACATTGCGAATTTTGGCATCAAGGATGGTGATCAGCTTCAGTTTGTCCGGCATGTCACAACTGGCTACAATGT
TATACGAAAGCAATCAAAGAAATGTGTGGTTTCCTCAAAACTGCTCAGTAGGATATCATCTAGGTCAAAAAGCTACAAGCAAAATGATCAGGAAGATATGGAAAGATATA
ACTACAACGATATAGAGAGTGGAAGGTTTCAACACCGTGGCAACAATGAGCTCTTCATGAACCATGAGCCAAAGATGGTATTCTTTTTGGGAGGATGGTTCTCTCACACC
AAGCTGGCATCCGCAGGAAAGATGAGCATCAATAGCCTGATGCGTCCATCAGGAACTCGGCCTAGCCTGGTGCGTGGATTTAAGAATTTAATACAATTATGCCGTGAGAA
ACGACATTATGAGAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCGACCGCATTTGCAGACTTGACGTTGTTGAATTTCCTCCGCTGCCAACGACGGTCCAGAAGCATCGCAGATCGTTCTCCCTGCTTTCGTCTCCTTTGATGAT
CGTTGGGCTCTCCAGGAAGAATGTTTTGTATCGCCAGCTTCCGCATCAGCCTCTCATGCTCTCTGTCCTTAAATTGGACGGCTCTTGTTTCGATATTCAAGTTAAGAGAT
CTGCTACAGTTGCTGAATTAAAGGGGGCAGTGGAGTCGGTCTTCAGCCACATGCCACAGGATGGACCAGGAAAGATTTCATGGCTCCATGTGTGGTGGCATTTCTGCTTA
TGCTATGCTGGTCAAAAGTTACTTGATGATGCGGACTACATTGCGAATTTTGGCATCAAGGATGGTGATCAGCTTCAGTTTGTCCGGCATGTCACAACTGGCTACAATGT
TATACGAAAGCAATCAAAGAAATGTGTGGTTTCCTCAAAACTGCTCAGTAGGATATCATCTAGGTCAAAAAGCTACAAGCAAAATGATCAGGAAGATATGGAAAGATATA
ACTACAACGATATAGAGAGTGGAAGGTTTCAACACCGTGGCAACAATGAGCTCTTCATGAACCATGAGCCAAAGATGGTATTCTTTTTGGGAGGATGGTTCTCTCACACC
AAGCTGGCATCCGCAGGAAAGATGAGCATCAATAGCCTGATGCGTCCATCAGGAACTCGGCCTAGCCTGGTGCGTGGATTTAAGAATTTAATACAATTATGCCGTGAGAA
ACGACATTATGAGAAAGTGAATAAAAAGAAGAGATCCATCATAGGAGTCTGA
Protein sequenceShow/hide protein sequence
MAVDRICRLDVVEFPPLPTTVQKHRRSFSLLSSPLMIVGLSRKNVLYRQLPHQPLMLSVLKLDGSCFDIQVKRSATVAELKGAVESVFSHMPQDGPGKISWLHVWWHFCL
CYAGQKLLDDADYIANFGIKDGDQLQFVRHVTTGYNVIRKQSKKCVVSSKLLSRISSRSKSYKQNDQEDMERYNYNDIESGRFQHRGNNELFMNHEPKMVFFLGGWFSHT
KLASAGKMSINSLMRPSGTRPSLVRGFKNLIQLCREKRHYEKVNKKKRSIIGV