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HG10013612 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013612
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein TPR1-like isoform X1
Genome locationChr02:3028464..3030966
RNA-Seq ExpressionHG10013612
SyntenyHG10013612
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR006595 - CTLH, C-terminal LisH motif
IPR027728 - Topless family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649955.1 hypothetical protein Csa_012980 [Cucumis sativus]1.4e-5876.77Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPG---------------SHKLLSSYKNMK
        M YFEE+LNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGERE+AREVVE DIE+F+ YNPG               SH LLSSY+NMK
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPG---------------SHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD
         ARKVV+ENIKKCIEANPLL+GKLSFPPL TTLQA YT AM +R RPPA  CRRD
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD

XP_008452905.1 PREDICTED: protein TPR1-like isoform X1 [Cucumis melo]4.1e-5877.42Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPG---------------SHKLLSSYKNMK
        M YFEE+LNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGERE+AREVVE DIE+F+ YNPG               SH LLSSYKNMK
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPG---------------SHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD
         ARKVV+ENIKKCIEANPLLQGKLSFPPL TTLQA Y  AM +RGR PA  CRRD
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD

XP_008452906.1 PREDICTED: protein TPR1-like isoform X2 [Cucumis melo]4.0e-6185.71Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE
        M YFEE+LNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGERE+AREVVE DIE+F+ YNPGSH LLSSYKNMK ARKVV+ENIKKCIE
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE

Query:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD
        ANPLLQGKLSFPPL TTLQA Y  AM +RGR PA  CRRD
Subjt:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD

XP_022139726.1 protein TPR1-like isoform X2 [Momordica charantia]5.4e-5877.4Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE
        M YFEEMLNCCAYNEAESYLCGFTDIHDN+YSTKIYFGIRKLKFLEAL+DGEREIAREVVENDIE+F+ YNPGSH+LLSSYKN+K ARKVV+ NIK+CI 
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE

Query:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRG-----RPPARACRRDS
        ANPL +GKL+ PPLPTTLQ +YT AM  RG       P   CRR+S
Subjt:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRG-----RPPARACRRDS

XP_038896847.1 protein TPR1-like [Benincasa hispida]2.8e-6284.4Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE
        M YFEEMLNCCAY+EAE+YLCGFTDIHDNIYS KIYF IRKLKFLEAL+DGEREIAR+VVEND+E+FN YNPGSH LLSSYKN+K ARKVV+ENIKKCI+
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE

Query:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRDS
        ANPLLQGKLSFPPLPTTLQAVYT AM +R   PA ACRRDS
Subjt:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRDS

TrEMBL top hitse value%identityAlignment
A0A0A0L5R0 Uncharacterized protein6.7e-6285Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE
        M YFEE+LNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGERE+AREVVE DIE+F+ YNPGSH LLSSY+NMK ARKVV+ENIKKCIE
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE

Query:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD
        ANPLL+GKLSFPPL TTLQA YT AM +R RPPA  CRRD
Subjt:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD

A0A1S3BUX9 protein TPR1-like isoform X12.0e-5877.42Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPG---------------SHKLLSSYKNMK
        M YFEE+LNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGERE+AREVVE DIE+F+ YNPG               SH LLSSYKNMK
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPG---------------SHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD
         ARKVV+ENIKKCIEANPLLQGKLSFPPL TTLQA Y  AM +RGR PA  CRRD
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD

A0A1S3BVS3 protein TPR1-like isoform X21.9e-6185.71Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE
        M YFEE+LNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGERE+AREVVE DIE+F+ YNPGSH LLSSYKNMK ARKVV+ENIKKCIE
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE

Query:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD
        ANPLLQGKLSFPPL TTLQA Y  AM +RGR PA  CRRD
Subjt:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD

A0A5D3D8T8 Protein TPR1-like isoform X11.9e-6185.71Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE
        M YFEE+LNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGERE+AREVVE DIE+F+ YNPGSH LLSSYKNMK ARKVV+ENIKKCIE
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE

Query:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD
        ANPLLQGKLSFPPL TTLQA Y  AM +RGR PA  CRRD
Subjt:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD

E5GCC7 Uncharacterized protein1.9e-6185.71Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE
        M YFEE+LNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEAL+DGERE+AREVVE DIE+F+ YNPGSH LLSSYKNMK ARKVV+ENIKKCIE
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIE

Query:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD
        ANPLLQGKLSFPPL TTLQA Y  AM +RGR PA  CRRD
Subjt:  ANPLLQGKLSFPPLPTTLQAVYTAAMTTRGRPPARACRRD

SwissProt top hitse value%identityAlignment
Q0J7U6 Protein TOPLESS-RELATED PROTEIN 28.8e-1939.84Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK
        M +FE+++    ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A E++  D++VF  +N                  ++ LS Y + K
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPP
        +AR +++  +KK IEANPL + KL+FPP
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPP

Q0WV90 Topless-related protein 12.0e-1839.39Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK
        M YFE+ ++   ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A +++  D++VF+ +N                  ++ LS Y + K
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTT
        +AR +++  +KK IEANPL + KL FP L T+
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTT

Q5NBT9 Protein TPR15.1e-1941.09Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHK---------------LLSSYKNMK
        M YFEE ++   ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A +++  D++VF+ +N   +K                LS Y + K
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHK---------------LLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPL
        +AR +++  +KK IEANPL + KL FP L
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPL

Q94AI7 Protein TOPLESS3.3e-1839.53Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK
        M YFE+ ++   ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A +++  D++VF+ +N                  ++ LS Y + K
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPL
        +AR +++  +KK IEANPL + KL FP L
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPL

Q9LRZ0 Topless-related protein 22.6e-1841.6Show/hide
Query:  YFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHK---------------LLSSYKNMKAA
        YFEE      ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A E++  D++VF  +N   +K                LS Y + K+A
Subjt:  YFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHK---------------LLSSYKNMKAA

Query:  RKVVIENIKKCIEANPLLQGKLSFP
        R ++   +KK IEANPL + KL+FP
Subjt:  RKVVIENIKKCIEANPLLQGKLSFP

Arabidopsis top hitse value%identityAlignment
AT1G15750.1 Transducin family protein / WD-40 repeat family protein2.4e-1939.53Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK
        M YFE+ ++   ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A +++  D++VF+ +N                  ++ LS Y + K
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPL
        +AR +++  +KK IEANPL + KL FP L
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPL

AT1G15750.2 Transducin family protein / WD-40 repeat family protein2.4e-1939.53Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK
        M YFE+ ++   ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A +++  D++VF+ +N                  ++ LS Y + K
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPL
        +AR +++  +KK IEANPL + KL FP L
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPL

AT1G80490.1 TOPLESS-related 11.4e-1939.39Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK
        M YFE+ ++   ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A +++  D++VF+ +N                  ++ LS Y + K
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTT
        +AR +++  +KK IEANPL + KL FP L T+
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTT

AT1G80490.2 TOPLESS-related 11.4e-1939.39Show/hide
Query:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK
        M YFE+ ++   ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A +++  D++VF+ +N                  ++ LS Y + K
Subjt:  MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNP---------------GSHKLLSSYKNMK

Query:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTT
        +AR +++  +KK IEANPL + KL FP L T+
Subjt:  AARKVVIENIKKCIEANPLLQGKLSFPPLPTT

AT3G16830.1 TOPLESS-related 21.8e-1941.6Show/hide
Query:  YFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHK---------------LLSSYKNMKAA
        YFEE      ++E E YL GFT + DN YS KI+F IRK K+LEAL   +R  A E++  D++VF  +N   +K                LS Y + K+A
Subjt:  YFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHK---------------LLSSYKNMKAA

Query:  RKVVIENIKKCIEANPLLQGKLSFP
        R ++   +KK IEANPL + KL+FP
Subjt:  RKVVIENIKKCIEANPLLQGKLSFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTATTTTGAAGAGATGTTGAATTGTTGTGCTTATAATGAAGCTGAAAGCTACCTTTGTGGATTTACTGATATTCATGATAATATTTATTCCACCAAGATTTACTT
TGGGATTAGAAAGCTCAAATTCCTTGAAGCACTCTCAGACGGAGAGCGGGAGATTGCTCGGGAAGTGGTTGAAAACGACATCGAAGTTTTCAACTATTATAACCCAGGGT
CTCACAAATTACTTTCGAGTTACAAAAATATGAAAGCGGCAAGAAAAGTTGTGATAGAAAATATCAAGAAATGCATTGAAGCCAATCCCCTTCTCCAAGGGAAGCTTTCA
TTTCCGCCACTCCCAACAACGTTGCAGGCCGTCTACACGGCGGCAATGACCACTAGGGGCAGGCCACCGGCAAGGGCTTGCAGGCGAGATTCCGGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTATTTTGAAGAGATGTTGAATTGTTGTGCTTATAATGAAGCTGAAAGCTACCTTTGTGGATTTACTGATATTCATGATAATATTTATTCCACCAAGATTTACTT
TGGGATTAGAAAGCTCAAATTCCTTGAAGCACTCTCAGACGGAGAGCGGGAGATTGCTCGGGAAGTGGTTGAAAACGACATCGAAGTTTTCAACTATTATAACCCAGGGT
CTCACAAATTACTTTCGAGTTACAAAAATATGAAAGCGGCAAGAAAAGTTGTGATAGAAAATATCAAGAAATGCATTGAAGCCAATCCCCTTCTCCAAGGGAAGCTTTCA
TTTCCGCCACTCCCAACAACGTTGCAGGCCGTCTACACGGCGGCAATGACCACTAGGGGCAGGCCACCGGCAAGGGCTTGCAGGCGAGATTCCGGCATTTGA
Protein sequenceShow/hide protein sequence
MGYFEEMLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALSDGEREIAREVVENDIEVFNYYNPGSHKLLSSYKNMKAARKVVIENIKKCIEANPLLQGKLS
FPPLPTTLQAVYTAAMTTRGRPPARACRRDSGI