; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013635 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013635
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionStromal cell-derived factor 2-like protein
Genome locationChr02:3234439..3238817
RNA-Seq ExpressionHG10013635
SyntenyHG10013635
Gene Ontology termsGO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0070449 - elongin complex (cellular component)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsIPR010684 - RNA polymerase II transcription factor SIII, subunit A
IPR016093 - MIR motif
IPR036300 - Mir domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064593.1 stromal cell-derived factor 2-like protein [Cucumis melo var. makuwa]1.5e-14094.07Show/hide
Query:  SSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGTVLKLMHEKTK
        SSGLSRRKPSASAS P S PTRIVYRERVP SHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYG+VLKLMHEKTK
Subjt:  SSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGTVLKLMHEKTK

Query:  FRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDY----WR
        FRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGG+SDSD+  +    +R
Subjt:  FRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDY----WR

Query:  LMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
        LMIEGSGKTWKQEQRVR QHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
Subjt:  LMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

KAG6591542.1 Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]4.3e-13582.83Show/hide
Query:  GSGDSSSSNEKSRSKR---------TIGYERSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLD
        G     +S  KS+++R         T+    SSGLSRRK SASAS PP APTRIVYRERVPPSH DLPFWQRNWFIALLFVMAIGFF+LALFLFLGLDL 
Subjt:  GSGDSSSSNEKSRSKR---------TIGYERSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLD

Query:  HGSPSSASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHL
         GSPSSASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTG+PNVDD+NSYWIVRP+ GTSAKQGD IKSGTIIR QHM TRKWLHSHL
Subjt:  HGSPSSASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHL

Query:  HASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
        HASPISGNLEVSCFG +S+SDTGDYW+L+IEGSGKTWKQ QR+R QH+DTGGYLHSH+KKYSR AGGQQEVCGVREKRADNVWLAAEGVYLPV ETK
Subjt:  HASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

KAG6608288.1 Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]7.8e-14595.9Show/hide
Query:  RSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAA-SSEGVEITYGTVLKLMHEK
        RSSGLSRRKPS+SASPPPS PTRIVYRERV PSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGS SSASAA SSEGVEITYGTVLKLMHEK
Subjt:  RSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAA-SSEGVEITYGTVLKLMHEK

Query:  TKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLM
        TKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHM+TRKWLHSHLHASPISGNLEVSCFGG+SDSDTGDYWRLM
Subjt:  TKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLM

Query:  IEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
        IEGSGKTWKQEQRVR QH+DT GYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLP+TETK
Subjt:  IEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

KAG7024427.1 Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-13176.95Show/hide
Query:  SSSSNEKSRSKR---------TIGYERSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSP
        S +S  KS+++R         T+    SSGLSRRK SASAS PPSAPTRIVYRERVPPSH DLPFWQRNWFIALLFVMAIGFF+LALFLFLGLDL  GSP
Subjt:  SSSSNEKSRSKR---------TIGYERSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSP

Query:  SSASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYW----------------------------IVRPQPGTSAKQG
        SSASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTG+PNVDD+NSYW                            IVRP+ GTSAKQG
Subjt:  SSASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYW----------------------------IVRPQPGTSAKQG

Query:  DTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVRE
        D IKSGTIIR QHM TRKWLHSHLHASPISGNLEVSCFG +S+SDTGDYW+L+IEGSGKTWKQ QR+R QH+DTGGYLHSH+KKYSR AGGQQEVCGVRE
Subjt:  DTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVRE

Query:  KRADNVWLAAEGVYLPVTETK
        KRADNVWLAAEGVYLPV ETK
Subjt:  KRADNVWLAAEGVYLPVTETK

KAG7037641.1 Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-14593.45Show/hide
Query:  KRTIGYERSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAA-SSEGVEITYGTV
        + T+    SSGLSRRKPS+SASPPPS PTRIVYRERV PSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGS SSASAA SSEGVEITYGTV
Subjt:  KRTIGYERSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAA-SSEGVEITYGTV

Query:  LKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDT
        LKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHM+TRKWLHSHLHASPISGNLEVSCFGG+SDSDT
Subjt:  LKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDT

Query:  GDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
        GDYWRLMIEGSGKTWKQEQRVR QH+DT GYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLP+TETK
Subjt:  GDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

TrEMBL top hitse value%identityAlignment
A0A371FQ99 Stromal cell-derived factor 2-like protein (Fragment)6.7e-12675.56Show/hide
Query:  QTYQKEKARKQSRQLIFCGSGDSSSSNEKSRSKRTIGYERSSGLSRRKP-----SASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGF
        +T Q+ KA  Q  +  F  S D  SS      +RT+    S  LSRRKP     S+S+S  PS  TRIVYRE   PS SD P WQ+NWFIALLFVMA+GF
Subjt:  QTYQKEKARKQSRQLIFCGSGDSSSSNEKSRSKRTIGYERSSGLSRRKP-----SASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGF

Query:  FALALFLFLGLDLD--HGSPSSASAASSEGVE--ITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSG
        FALALFLFL LD D    S  SASAASSEGVE  +TYGTVLKL HEKTKFRLHSHDVPYGSGSGQQSVTGFP+VDD+NSYWIVRP+P TSAKQGD IKSG
Subjt:  FALALFLFLGLDLD--HGSPSSASAASSEGVE--ITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSG

Query:  TIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNV
        TIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGG+SDSDTGDYW+L+IEGSGKTWKQ+Q++R QH+DTGGYLHSHDKKYSRIAGGQQEVCGVREKRADN+
Subjt:  TIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNV

Query:  WLAAEGVYLPVTETK
        WLAAEGVYLPVT +K
Subjt:  WLAAEGVYLPVTETK

A0A445KWC9 Stromal cell-derived factor 2-like protein5.2e-12682.62Show/hide
Query:  RTIGYERSSGLSRRKPSASASPPPS---APTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPS----SASAASSEGVE-
        RT+    S  LSRRKPS+S+S         TRIVYRE   PS SD P WQ+NWFIALLFVMA+GFFALA+FLFL LD D    S    SASAASSEGVE 
Subjt:  RTIGYERSSGLSRRKPSASASPPPS---APTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPS----SASAASSEGVE-

Query:  -ITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFG
         +TYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRP+PGTSAKQGD IKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFG
Subjt:  -ITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFG

Query:  GESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
        GES+SDTGDYW+L+IEGSGKTWKQ+QR+R QHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE+K
Subjt:  GESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

A0A4D6NUV0 Dolichyl-phosphate-mannose-protein mannosyltransferase9.7e-12581.05Show/hide
Query:  SRSKRTIGYERSSGLSRRKPSAS--ASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLD----HGSPSSASAASSEG
        S+S RT+    S  LSRRK S+S  +    S  TRIVYRE    S SD P WQ+NWFIALLFVMA+GFFALALFLF+ LD D      + +SASAASSEG
Subjt:  SRSKRTIGYERSSGLSRRKPSAS--ASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLD----HGSPSSASAASSEG

Query:  VE--ITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVS
        VE  ITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFP+VDDSNSYWIVRPQPGT+AKQGD+IKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVS
Subjt:  VE--ITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVS

Query:  CFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
        CFGGE++SDTGDYWRL+IEGSGKTWKQ+Q++R QHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE+K
Subjt:  CFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

A0A5A7V8Z2 Stromal cell-derived factor 2-like protein7.4e-14194.07Show/hide
Query:  SSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGTVLKLMHEKTK
        SSGLSRRKPSASAS P S PTRIVYRERVP SHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYG+VLKLMHEKTK
Subjt:  SSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGTVLKLMHEKTK

Query:  FRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDY----WR
        FRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGG+SDSD+  +    +R
Subjt:  FRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDY----WR

Query:  LMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
        LMIEGSGKTWKQEQRVR QHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
Subjt:  LMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

A0A6A1UWA3 Stromal cell-derived factor 2-like protein9.4e-12885.07Show/hide
Query:  RSSGLSRRKPSASA-SPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGTVLKLMHEK
        RS GLSRRK S+SA S   S  TRIVYRE    S SD PFWQ+NWFI LLF+MA+GFFA+ALFLFLGLD D+G  SSASAAS+EGVEITYGTVLKLMHE+
Subjt:  RSSGLSRRKPSASA-SPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGTVLKLMHEK

Query:  TKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLM
        TKFRLHSHDVPYGSGSGQQSVTGFPNVDD+NSYWIVRPQPGTSAKQGD+IKSGTIIRLQHMRTRKWLHSHLHASPI+GNLEVSCFGGES SDTGDYWR++
Subjt:  TKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLM

Query:  IEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK
        IEGSGKTWKQ+QR+RF H+DTGGYLHSHDKKY+RIAGGQQEVCGV+EKRADNVWLAAEGVYLPV E+K
Subjt:  IEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK

SwissProt top hitse value%identityAlignment
Q3SZ45 Stromal cell-derived factor 21.8e-3843.92Show/hide
Query:  ASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPIS
        ++  SS    +T G+V+KL++ +   RLHSHDV YGSGSGQQSVTG  +VDDSNSYW +R +  T  ++G  I+ G  IRL H+ T + LHSH   SP+S
Subjt:  ASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPIS

Query:  GNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE
        GN EVS FG E + D  D W ++   +G  W ++  VRF+H  T   L    ++Y R   GQ+EV G+ +   +N W A EG+++  +E
Subjt:  GNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE

Q54P23 Stromal cell-derived factor 2-like protein2.6e-4249.72Show/hide
Query:  EITYGTVLKLMHEKTKFRLHSHDVPYGS---GSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVS
        ++TYG+++KL H  T FRLHSH V YGS   GSGQQSVTGFP  DD+NS W+++   G    QG  +K+G IIRL H  T+K LHSHL  SP++   EVS
Subjt:  EITYGTVLKLMHEKTKFRLHSHDVPYGS---GSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVS

Query:  CFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHS-HDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVY
        CFG   + DTGD W +  E SGK W + Q VRF+H DT  YL +    KY     GQ E+ G + K  D  W   EG+Y
Subjt:  CFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHS-HDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVY

Q93ZE8 Stromal cell-derived factor 2-like protein9.4e-10179.17Show/hide
Query:  MAIGFFALALFLFLGLDLDHGSPSSASAAS-SEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIK
        MA+GFF LA+FL+L LD D G  S+++AAS  EGVEITYG+ +KLMHEKTKFRLHSHDVPYGSGSGQQSVTGFP V DSNSYWIV+P PGT+ KQGD +K
Subjt:  MAIGFFALALFLFLGLDLDHGSPSSASAAS-SEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIK

Query:  SGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRAD
        SG  IRLQHM+TRKWLHSHLHASPISGNLEVSCFG +++SDTGD+W+L+IEGSGKTWKQ+QRVR QHIDT GYLHSHDKKY RIAGGQQEVCG+REK+AD
Subjt:  SGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRAD

Query:  NVWLAAEGVYLPVTET
        N+WLAAEGVYLP+ E+
Subjt:  NVWLAAEGVYLPVTET

Q99470 Stromal cell-derived factor 27.1e-4046.84Show/hide
Query:  SASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPI
        SA  ASS GV +T G+V+KL++ +   RLHSHDV YGSGSGQQSVTG  +VDDSNSYW +R +  T  ++G  IK G  IRL H+ T + LHSH   SP+
Subjt:  SASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPI

Query:  SGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE
        SGN EVS FG E + D  D W ++   +G  W ++  VRF+H  T   L    ++Y R   GQ+EV G+ +   +N W A EG+++  +E
Subjt:  SGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE

Q9DCT5 Stromal cell-derived factor 24.6e-3945.79Show/hide
Query:  SASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPI
        SA  AS+  V +T G+V+KL++ +   RLHSHDV YGSGSGQQSVTG  +VDDSNSYW +R +  T  ++G  IK G  IRL H+ T + LHSH   SP+
Subjt:  SASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPI

Query:  SGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE
        SGN EVS FG E + D  D W ++   +G  W ++  VRF+H  T   L    ++Y R   GQ+EV G+ +   +N W A EG+++  +E
Subjt:  SGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE

Arabidopsis top hitse value%identityAlignment
AT2G25110.1 stromal cell-derived factor 2-like protein precursor6.7e-10279.17Show/hide
Query:  MAIGFFALALFLFLGLDLDHGSPSSASAAS-SEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIK
        MA+GFF LA+FL+L LD D G  S+++AAS  EGVEITYG+ +KLMHEKTKFRLHSHDVPYGSGSGQQSVTGFP V DSNSYWIV+P PGT+ KQGD +K
Subjt:  MAIGFFALALFLFLGLDLDHGSPSSASAAS-SEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIK

Query:  SGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRAD
        SG  IRLQHM+TRKWLHSHLHASPISGNLEVSCFG +++SDTGD+W+L+IEGSGKTWKQ+QRVR QHIDT GYLHSHDKKY RIAGGQQEVCG+REK+AD
Subjt:  SGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRAD

Query:  NVWLAAEGVYLPVTET
        N+WLAAEGVYLP+ E+
Subjt:  NVWLAAEGVYLPVTET

AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).3.1e-2237.5Show/hide
Query:  DAWINEAIDSVRCIGDVGEADLQFLELILPHCTVGQLMHVEKSSKGRDLTLVTNKLWKSFYEKKFGKDDAKIVVERMH-RRNEPFKWMNLYVAKMEELEN
        D  + +AID+V+ IG VG  D Q LE IL HCT+ QL H+E ++   DL+ +T+K WK FY+K +G++D K ++E +   +   FKW NLY  K+  ++ 
Subjt:  DAWINEAIDSVRCIGDVGEADLQFLELILPHCTVGQLMHVEKSSKGRDLTLVTNKLWKSFYEKKFGKDDAKIVVERMH-RRNEPFKWMNLYVAKMEELEN

Query:  KAKKIEERIIQTYQKEKARKQSRQLIFCGSGDSSSSN--EKSRSKRTIGYERSSGLSRRK
        K K++  R+ + Y+ E  RKQSRQ   C     S       S S   +G+ +S+ + + K
Subjt:  KAKKIEERIIQTYQKEKARKQSRQLIFCGSGDSSSSN--EKSRSKRTIGYERSSGLSRRK

AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684).3.1e-2237.5Show/hide
Query:  DAWINEAIDSVRCIGDVGEADLQFLELILPHCTVGQLMHVEKSSKGRDLTLVTNKLWKSFYEKKFGKDDAKIVVERMH-RRNEPFKWMNLYVAKMEELEN
        D  + +AID+V+ IG VG  D Q LE IL HCT+ QL H+E ++   DL+ +T+K WK FY+K +G++D K ++E +   +   FKW NLY  K+  ++ 
Subjt:  DAWINEAIDSVRCIGDVGEADLQFLELILPHCTVGQLMHVEKSSKGRDLTLVTNKLWKSFYEKKFGKDDAKIVVERMH-RRNEPFKWMNLYVAKMEELEN

Query:  KAKKIEERIIQTYQKEKARKQSRQLIFCGSGDSSSSN--EKSRSKRTIGYERSSGLSRRK
        K K++  R+ + Y+ E  RKQSRQ   C     S       S S   +G+ +S+ + + K
Subjt:  KAKKIEERIIQTYQKEKARKQSRQLIFCGSGDSSSSN--EKSRSKRTIGYERSSGLSRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAATAGGTAAAGTAATTTCGTCTTTGAATAACGATGCTTGGATTAACGAAGCTATAGATAGTGTGAGATGTATTGGAGATGTTGGCGAAGCAGATTTACAATT
TCTAGAGCTTATTTTGCCACATTGCACTGTTGGCCAATTGATGCACGTTGAAAAAAGTTCTAAAGGGAGAGATCTCACTCTAGTCACGAATAAATTGTGGAAATCTTTTT
ACGAAAAAAAGTTTGGTAAAGACGACGCTAAGATTGTAGTTGAGAGGATGCATCGTAGGAATGAACCATTTAAATGGATGAATTTATATGTGGCCAAGATGGAAGAGTTA
GAAAATAAGGCAAAGAAAATTGAAGAACGAATAATACAAACCTATCAAAAGGAAAAGGCTCGAAAGCAAAGTCGTCAATTAATATTTTGTGGCAGTGGAGATTCCTCATC
AAGCAACGAGAAATCAAGATCTAAAAGAACAATTGGATATGAGAGGTCTTCAGGTCTGTCTCGGAGAAAACCTTCCGCTTCTGCTTCTCCTCCGCCGTCAGCGCCGACGA
GGATCGTCTACAGGGAGAGAGTTCCGCCGTCGCATTCCGATTTGCCTTTCTGGCAGCGTAACTGGTTCATCGCCTTGCTTTTCGTTATGGCTATCGGTTTCTTCGCTCTT
GCACTTTTTCTCTTCCTCGGTCTCGATCTTGACCACGGCTCCCCGTCGTCTGCCTCTGCTGCGTCCTCCGAGGGCGTTGAGATTACTTATGGAACAGTTCTAAAGCTAAT
GCACGAGAAAACTAAATTTCGTTTGCATTCCCATGACGTGCCCTATGGTTCTGGCAGTGGGCAACAGTCGGTCACAGGATTTCCAAATGTTGATGATTCCAATAGCTACT
GGATAGTAAGACCTCAGCCTGGGACATCTGCGAAACAGGGGGACACAATTAAAAGTGGGACAATTATCAGATTGCAACACATGAGGACAAGGAAATGGCTGCACAGCCAC
TTGCATGCGTCCCCAATATCGGGAAATCTAGAGGTTAGTTGCTTTGGTGGAGAGTCTGACTCCGACACCGGTGATTACTGGAGGCTTATGATCGAAGGGAGTGGAAAGAC
ATGGAAGCAAGAACAGAGAGTTCGGTTTCAGCATATCGATACCGGTGGCTACCTACATAGTCATGACAAGAAATACAGCCGTATTGCCGGAGGACAGCAGGAGGTCTGTG
GAGTGCGGGAGAAGCGAGCTGACAACGTCTGGCTGGCCGCAGAAGGTGTTTATCTTCCTGTTACGGAGACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAATAGGTAAAGTAATTTCGTCTTTGAATAACGATGCTTGGATTAACGAAGCTATAGATAGTGTGAGATGTATTGGAGATGTTGGCGAAGCAGATTTACAATT
TCTAGAGCTTATTTTGCCACATTGCACTGTTGGCCAATTGATGCACGTTGAAAAAAGTTCTAAAGGGAGAGATCTCACTCTAGTCACGAATAAATTGTGGAAATCTTTTT
ACGAAAAAAAGTTTGGTAAAGACGACGCTAAGATTGTAGTTGAGAGGATGCATCGTAGGAATGAACCATTTAAATGGATGAATTTATATGTGGCCAAGATGGAAGAGTTA
GAAAATAAGGCAAAGAAAATTGAAGAACGAATAATACAAACCTATCAAAAGGAAAAGGCTCGAAAGCAAAGTCGTCAATTAATATTTTGTGGCAGTGGAGATTCCTCATC
AAGCAACGAGAAATCAAGATCTAAAAGAACAATTGGATATGAGAGGTCTTCAGGTCTGTCTCGGAGAAAACCTTCCGCTTCTGCTTCTCCTCCGCCGTCAGCGCCGACGA
GGATCGTCTACAGGGAGAGAGTTCCGCCGTCGCATTCCGATTTGCCTTTCTGGCAGCGTAACTGGTTCATCGCCTTGCTTTTCGTTATGGCTATCGGTTTCTTCGCTCTT
GCACTTTTTCTCTTCCTCGGTCTCGATCTTGACCACGGCTCCCCGTCGTCTGCCTCTGCTGCGTCCTCCGAGGGCGTTGAGATTACTTATGGAACAGTTCTAAAGCTAAT
GCACGAGAAAACTAAATTTCGTTTGCATTCCCATGACGTGCCCTATGGTTCTGGCAGTGGGCAACAGTCGGTCACAGGATTTCCAAATGTTGATGATTCCAATAGCTACT
GGATAGTAAGACCTCAGCCTGGGACATCTGCGAAACAGGGGGACACAATTAAAAGTGGGACAATTATCAGATTGCAACACATGAGGACAAGGAAATGGCTGCACAGCCAC
TTGCATGCGTCCCCAATATCGGGAAATCTAGAGGTTAGTTGCTTTGGTGGAGAGTCTGACTCCGACACCGGTGATTACTGGAGGCTTATGATCGAAGGGAGTGGAAAGAC
ATGGAAGCAAGAACAGAGAGTTCGGTTTCAGCATATCGATACCGGTGGCTACCTACATAGTCATGACAAGAAATACAGCCGTATTGCCGGAGGACAGCAGGAGGTCTGTG
GAGTGCGGGAGAAGCGAGCTGACAACGTCTGGCTGGCCGCAGAAGGTGTTTATCTTCCTGTTACGGAGACAAAGTAG
Protein sequenceShow/hide protein sequence
MSQIGKVISSLNNDAWINEAIDSVRCIGDVGEADLQFLELILPHCTVGQLMHVEKSSKGRDLTLVTNKLWKSFYEKKFGKDDAKIVVERMHRRNEPFKWMNLYVAKMEEL
ENKAKKIEERIIQTYQKEKARKQSRQLIFCGSGDSSSSNEKSRSKRTIGYERSSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFAL
ALFLFLGLDLDHGSPSSASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSH
LHASPISGNLEVSCFGGESDSDTGDYWRLMIEGSGKTWKQEQRVRFQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTETK