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HG10013654 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013654
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUPF0329 protein ECU05_1680/ECU11_0050
Genome locationChr02:3468890..3469042
RNA-Seq ExpressionHG10013654
SyntenyHG10013654
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2280627.1 hypothetical protein Bca52824_051847 [Brassica carinata]3.6e-0973.58Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA D++PK+E KKE+   E +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
XP_009127136.1 UPF0329 protein ECU05_1680/ECU11_0050 [Brassica rapa]3.6e-0973.58Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA D++PK+E KKE+   E +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
XP_011654067.1 uncharacterized protein LOC105435295 [Cucumis sativus]4.6e-1281.13Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKA---EDNQPKKEGKKEDEAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA     NQPKKE KKED+   PPKEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKA---EDNQPKKEGKKEDEAQAPPKEEKKE
XP_022568949.1 poly [ADP-ribose] polymerase 2 isoform X1 [Brassica napus]3.6e-0973.58Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA D++PK+E KKE+   E +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
XP_038897115.1 uncharacterized protein LOC120085277 [Benincasa hispida]5.2e-1692Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKEDEAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA+DNQPKKE KKED+ QAPPKEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKEDEAQAPPKEEKKE
TrEMBL top hitse value%identityAlignment
A0A0D3AMC4 Uncharacterized protein1.8e-0973.58Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA D++PK+E KKE+   E +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
A0A398ACC4 Uncharacterized protein1.8e-0973.58Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA D++PK+E KKE+   E +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
A0A3P6D1Q5 Uncharacterized protein1.8e-0973.58Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA D++PK+E KKE+   E +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
A0A6J0LG75 UPF0329 protein ECU05_1680/ECU11_00501.8e-0973.58Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA D++PK+E KKE+   E +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
M4E1M8 Uncharacterized protein1.8e-0973.58Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPKQGKPKA D++PK+E KKE+   E +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKED---EAQAPPKEEKKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53880.1 unknown protein1.9e-1172.55Show/hide
Query:  MKFLFQCPCCSCFCFMKPKQGKPKA-EDNQPKKEGKKEDEAQAPPKEEKKE
        MKFLFQCPCCSCFCFMKPK GKPKA  D +PK+E KKE + +   KEEKKE
Subjt:  MKFLFQCPCCSCFCFMKPKQGKPKA-EDNQPKKEGKKEDEAQAPPKEEKKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCTTGTTCCAATGTCCTTGTTGCTCTTGTTTTTGCTTCATGAAGCCGAAACAAGGCAAGCCAAAGGCTGAAGATAATCAACCAAAAAAAGAAGGCAAAAAGGA
AGATGAAGCACAAGCACCACCCAAGGAAGAGAAGAAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCTTGTTCCAATGTCCTTGTTGCTCTTGTTTTTGCTTCATGAAGCCGAAACAAGGCAAGCCAAAGGCTGAAGATAATCAACCAAAAAAAGAAGGCAAAAAGGA
AGATGAAGCACAAGCACCACCCAAGGAAGAGAAGAAAGAATAA
Protein sequenceShow/hide protein sequence
MKFLFQCPCCSCFCFMKPKQGKPKAEDNQPKKEGKKEDEAQAPPKEEKKE