CuGenDBv2

Gene ID	HG10013670
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ARM repeat superfamily protein
Genome location	Chr02:3632576..3633277
RNA-Seq Expression	HG10013670
Synteny	HG10013670
Gene Ontology terms	GO:0043248 - proteasome assembly (biological process)
InterPro domains	IPR019538 - 26S proteasome non-ATPase regulatory subunit 5

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022139463.1 uncharacterized protein LOC111010386 isoform X1 [Momordica charantia]

1.0e-21

88.52

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCC+AIHKAFMSSTRLTG+PALA IASKLQEAV NGPYL+RRN ETQPA+MTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

XP_022940916.1 uncharacterized protein LOC111446360 [Cucurbita moschata]

3.5e-22

93.44

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCCLAIHKAFMSSTRLTG+PALA IASKLQEAV NGPYLSRR LETQPAIMTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

XP_022981236.1 uncharacterized protein LOC111480433 [Cucurbita maxima]

3.5e-22

93.44

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCCLAIHKAFMSSTRLTG+PALA IASKLQEAV NGPYLSRR LETQPAIMTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

XP_038898234.1 uncharacterized protein LOC120085959 isoform X1 [Benincasa hispida]

1.6e-22

93.44

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCCLAIHKAFMSSTRLTG+PALA IASKLQEAV NGPYL+RRNLETQPAIMTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

XP_038898235.1 uncharacterized protein LOC120085959 isoform X2 [Benincasa hispida]

1.6e-22

93.44

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCCLAIHKAFMSSTRLTG+PALA IASKLQEAV NGPYL+RRNLETQPAIMTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L246 Uncharacterized protein

8.4e-22

90.16

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCCLAIHKAFMSS RLTG+PALA IASKLQEAV NGPYL+RRN+ETQPAIMTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

A0A1S3CKC0 uncharacterized protein LOC103501781 isoform X1

1.9e-21

88.52

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCCL+IHKAFMSS RLTG+PALA IASKLQEAV NGPYL+RRN+ETQPAIMTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

A0A6J1CFN3 uncharacterized protein LOC111010386 isoform X1

4.9e-22

88.52

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCC+AIHKAFMSSTRLTG+PALA IASKLQEAV NGPYL+RRN ETQPA+MTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

A0A6J1FJQ7 uncharacterized protein LOC111446360

1.7e-22

93.44

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCCLAIHKAFMSSTRLTG+PALA IASKLQEAV NGPYLSRR LETQPAIMTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

A0A6J1IVZ7 uncharacterized protein LOC111480433

1.7e-22

93.44

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCCLAIHKAFMSSTRLTG+PALA IASKLQEAV NGPYLSRR LETQPAIMTAERF
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G15180.1 ARM repeat superfamily protein

8.6e-11

49.18

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCC AIH+AF+ S     +P   +   KLQEAV +GPY+S+++   +P +MT E F
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

AT3G15180.2 ARM repeat superfamily protein

8.6e-11

49.18

Show/hide

Query:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF
        MEARYNCC AIH+AF+ S     +P   +   KLQEAV +GPY+S+++   +P +MT E F
Subjt:  MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGCTAGATATAACTGTTGTTTGGCTATTCATAAGGCCTTCATGTCTTCAACTAGGCTTACTGGCAATCCTGCTCTTGCCGAAATAGCCTCGAAGCTGCAGGAAGC
TGTTATAAATGGTCCATATCTTAGTAGAAGGAATCTTGAAACTCAACCAGCAATTATGACAGCTGAGAGATTTTAA

mRNA sequence

Show/hide mRNA sequence

ATGGAAGCTAGATATAACTGTTGTTTGGCTATTCATAAGGCCTTCATGTCTTCAACTAGGCTTACTGGCAATCCTGCTCTTGCCGAAATAGCCTCGAAGCTGCAGGAAGC
TGTTATAAATGGTCCATATCTTAGTAGAAGGAATCTTGAAACTCAACCAGCAATTATGACAGCTGAGAGATTTTAA

Protein sequence

Show/hide protein sequence

MEARYNCCLAIHKAFMSSTRLTGNPALAEIASKLQEAVINGPYLSRRNLETQPAIMTAERF

HG10013670 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome