; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013736 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013736
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L13
Genome locationChr02:4317300..4320056
RNA-Seq ExpressionHG10013736
SyntenyHG10013736
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.1e-12283.21Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N + SNR IPR SL+AGFPLP SKSSFL TQTTI+L S PKS + QVRAQELDRVPLEQRWMF+GDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_004146016.1 50S ribosomal protein L13, chloroplastic [Cucumis sativus]2.2e-12483.94Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTL NG+TSN+  PR SLL  FPLPHSKSSFLLTQT+ISL SN K   LQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_008463780.1 PREDICTED: 50S ribosomal protein L13, chloroplastic [Cucumis melo]6.4e-12484.31Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+L NG+TSNR IP  SLL  FPLPHSKSSFLLTQTTI L SN K   L+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]7.1e-12383.58Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N + SNR IPR SL+AGFPLP SKSSFL TQTTI+L S PKS + QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]9.2e-12383.58Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL NG+ SNR +PR SL+AGFPL  SKSSFL TQTTI+L S PKS +LQVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

TrEMBL top hitse value%identityAlignment
A0A0A0KZG1 Uncharacterized protein1.1e-12483.94Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHSTL NG+TSN+  PR SLL  FPLPHSKSSFLLTQT+ISL SN K   LQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEK+AVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A1S3CK07 50S ribosomal protein L13, chloroplastic3.1e-12484.31Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTFSLHS+L NG+TSNR IP  SLL  FPLPHSKSSFLLTQTTI L SN K   L+VRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSG+KRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like3.8e-12283.58Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTPTF +HSTL NGS SNRGIPRKS + GFPLP SKS  L TQTTI+LNS  KS  +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like3.4e-12383.58Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHSTL N + SNR IPR SL+AGFPLP SKSSFL TQTTI+L S PKS + QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like4.9e-12282.85Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TFSLHST  N + SNR IPRKSL+AGFPLP SKSSFL TQTTI+L S PKS + QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDL TYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEH

Query:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        AVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKPV+LPIRDKRINKER
Subjt:  AVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

SwissProt top hitse value%identityAlignment
B8HMT1 50S ribosomal protein L134.7e-4556.4Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK    YTPS+D G FVIVVNAEKVAV+G+KRTQK+YRRHSGRPGGM  ETF +LQ R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIR
        ERIIEHAV+GMLPK                            LGR LF  LKVY GPDHPH+AQKP  L ++
Subjt:  ERIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIR

P12629 50S ribosomal protein L13, chloroplastic4.7e-7756.52Show/hide
Query:  MLCASSST-PTFSLHSTLFNGSTSNRGI---PRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTW
        M CASS T P+     + F  +     +   PR ++ A   +   KS+   T+ T       ++   +     +  VPL+QRWMF  +E  GPDIWN TW
Subjt:  MLCASSST-PTFSLHSTLFNGSTSNRGI---PRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTW

Query:  YPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERII
        YPK+ADHV T+K WYVVDATD ILGR+ASTIA HIRGK+LA+YTPSVDMGAFVIVVNA+KVAVSG+KRTQKLYRRHSGRPGG+  ETFDQLQ+RIPERII
Subjt:  YPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERII

Query:  EHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        EHAVRGMLPKGR                          LGR LFNHLKVYKG +HPH+AQ+P++LP+RDKRI  E+
Subjt:  EHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Q3MF94 50S ribosomal protein L132.5e-4658.48Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+ A YTP +D G FVIVVNAEKVAV+G+KRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPI
        ERI+EHAV+GMLPK                            LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  ERIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q8YPK6 50S ribosomal protein L137.2e-4657.89Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+ A YTP +D G FVIVVNA+KVAV+G+KRTQKLYRRHSGRPGGM  ETF +LQQR+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIP

Query:  ERIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPI
        ERI+EHAV+GMLPK                            LG+ LF  LKVY GP HPH+AQKP EL I
Subjt:  ERIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPI

Q9SYL9 50S ribosomal protein L13, chloroplastic1.1e-8661.65Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L + S  + G  RKS   GF L    ++       + + +N K   LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+LA+YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        RI+EHAVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein7.9e-8861.65Show/hide
Query:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L + S  + G  RKS   GF L    ++       + + +N K   LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+LA+YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGMTVETFDQLQQRIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPE

Query:  RIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER
        RI+EHAVRGMLPKGR                          LGRALFNHLKVYKGPDHPHEAQKP++LPIRDKRI  ++
Subjt:  RIIEHAVRGMLPKGREFPCFLPPLMFLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

AT3G01790.1 Ribosomal protein L13 family protein4.4e-1440.62Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLP
        W V DA  ++LGRLAS I+  ++ KD  TY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLP

AT3G01790.2 Ribosomal protein L13 family protein4.4e-1440.62Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLP
        W V DA  ++LGRLAS I+  ++ KD  TY P+ D G   IV+NA+++  +GRK T K YR H+G  G +   +      + P  +I  AV  MLP
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCACTCTTTTCAATGGAAGCACAAGTAACAGAGGCATTCCCAGAAAGTCACTCCTTGCTGG
GTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCACGATTTCTCTAAACTCCAACCCCAAGAGTCCGCTCCTTCAAGTGCGAGCTCAGGAGCTGGATC
GTGTCCCTTTAGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGCAGATCATGTGAACACAGAAAAA
CCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGGCAACCTACACTCCAAGTGTGGATAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGTAGAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACCGTAG
AAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCAAAAGGGAGGGAATTTCCCTGTTTCCTGCCTCCATTGATG
TTCCTGATAATTTATTGGCTGTTTCAAACCATGGCAATTTATGTGCAGCTTGGAAGAGCACTTTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACATGAGGC
ACAAAAGCCAGTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACACCCACTTTCTCTTTACATTCCACTCTTTTCAATGGAAGCACAAGTAACAGAGGCATTCCCAGAAAGTCACTCCTTGCTGG
GTTTCCACTCCCACATTCAAAATCTTCTTTTCTTCTAACCCAGACCACGATTTCTCTAAACTCCAACCCCAAGAGTCCGCTCCTTCAAGTGCGAGCTCAGGAGCTGGATC
GTGTCCCTTTAGAACAACGGTGGATGTTCGAGGGCGACGAGCTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGCAGATCATGTGAACACAGAAAAA
CCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGACTAGCTTCGACCATTGCCAATCATATCCGAGGGAAGGATTTGGCAACCTACACTCCAAGTGTGGATAT
GGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGTAGAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGACCGTAG
AAACTTTTGACCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCAAAAGGGAGGGAATTTCCCTGTTTCCTGCCTCCATTGATG
TTCCTGATAATTTATTGGCTGTTTCAAACCATGGCAATTTATGTGCAGCTTGGAAGAGCACTTTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACATGAGGC
ACAAAAGCCAGTTGAGCTGCCAATTAGGGACAAAAGGATAAACAAAGAAAGATAG
Protein sequenceShow/hide protein sequence
MAMLCASSSTPTFSLHSTLFNGSTSNRGIPRKSLLAGFPLPHSKSSFLLTQTTISLNSNPKSPLLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEK
PWYVVDATDKILGRLASTIANHIRGKDLATYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGREFPCFLPPLM
FLIIYWLFQTMAIYVQLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER