; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013740 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013740
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibosomal RNA small subunit methyltransferase G, putative
Genome locationChr02:4378844..4383254
RNA-Seq ExpressionHG10013740
SyntenyHG10013740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591775.1 hypothetical protein SDJN03_14121, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6578.95Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVS-GGGETPVRLLG--GEGEGEELGSRNSTAAV
        MEALWNLEDKWKLSTQQAFILLTCTA A++G CAAAWAK+ K EK E RQ       WWK  A+RRKVS GGGETP RLL   GEGEGE+ GSRNSTAAV
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVS-GGGETPVRLLG--GEGEGEELGSRNSTAAV

Query:  WQRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQK
        WQRPILMGEKCEMLKYSGLILYDERGRLL DQIAAMEN YKVLLRR   +SK +VEGSTLM FLF+GNLQK
Subjt:  WQRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQK

XP_011654026.2 uncharacterized protein LOC105435287 [Cucumis sativus]7.0e-7484.3Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKW--TAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVW
        MEALWNLEDKWKLSTQQAF+LLTCT AA++GLCAAAWAKK KGEKK H +RT   +RWWKW  T  RRK SGGGETPVRLLG E EGEELGSRNSTAAVW
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKW--TAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKRG
        QRPILMGEKCEMLKYSGLILYDERGRLL +QIAAMEN YKVLLRRRSH SKDKVEGSTLMLFL+ GN +KRG
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKRG

XP_022976856.1 uncharacterized protein LOC111477103 isoform X1 [Cucurbita maxima]7.0e-6680.7Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTER-WWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQ
        MEALWNLEDKWKLSTQQAFILLTCTA A++G CAA WAK+ K EK E RQ T  TER WWK  A+RRKVSGGGETPVRLLG  GEGE+ GSRNSTAAVWQ
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTER-WWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQ

Query:  RPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKRG
        RPILMGEKCEMLKYSGLILYDERGRLL DQIAAMEN YKVLLRR   NSKDKVEGSTLM FLF     K G
Subjt:  RPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKRG

XP_023534958.1 uncharacterized protein LOC111796532 isoform X1 [Cucurbita pepo subsp. pepo]3.3e-7182.14Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAFILLTCTA A++G CAAAWAK+ K EK E RQ   V   WWK  A+ RKVSGGGETPVRLLGGEGEGE+ GSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQK
        PILMGEKCEMLKYSGLILYDERGRLL DQIAAMEN YKVLLRRR +NSK++VEGSTLM F+F+GNLQK
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQK

XP_038899821.1 uncharacterized protein LOC120087050 isoform X1 [Benincasa hispida]1.3e-8090.53Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQR
        MEALWNLEDKWKLSTQQAFILLTCTA A+VG+C AAWAKK +GEKK+HR+ TTV  RWWKW AERRK SGGGETPVRLL GEGEGEELGSRNSTAAVWQR
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQR

Query:  PILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKR
        PILMGEKCEMLKYSGLILYDERGRLL DQIAAMEN YKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKR
Subjt:  PILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKR

TrEMBL top hitse value%identityAlignment
A0A0A0L376 Uncharacterized protein2.0e-5884.29Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKW--TAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVW
        MEALWNLEDKWKLSTQQAF+LLTCT AA++GLCAAAWAKK KGEKK H +RT   +RWWKW  T  RRK SGGGETPVRLLG E EGEELGSRNSTAAVW
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKW--TAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYK
        QRPILMGEKCEMLKYSGLILYDERGRLL +QIAAMEN YK
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYK

A0A5D3DW00 Uncharacterized protein4.9e-5782.86Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERR--KVSGGGETPVRLLGGEGEGEELGSRNSTAAVW
        MEALWNLEDKWKLSTQQAF+LLTCT AA++ LCAAAWA+K KGEKK HR+RT   +RWWKW AE R     GGGETPVRLLG E EGEELGSRNSTAAVW
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERR--KVSGGGETPVRLLGGEGEGEELGSRNSTAAVW

Query:  QRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYK
        QRPILMGEKCEMLKYSGLILYDERGRLL DQIAAMEN YK
Subjt:  QRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYK

A0A6J1F750 uncharacterized protein LOC111442724 isoform X12.1e-6377.78Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVS-GGGETPVRLLG--GEGEGEELGSRNSTAAV
        MEALWNLEDKWKLSTQQAFILLTCTA A++G CAAAWAK+ K EK E RQ       WWK  A+RRKVS GGGETP RLL   GEGEGE+ GSRNSTAAV
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVS-GGGETPVRLLG--GEGEGEELGSRNSTAAV

Query:  WQRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQK
        WQRPILMGEKCEMLKYSGLILYDERGRLL DQIAAMEN YKVLLRR      ++VEGSTLM FLF+GNLQK
Subjt:  WQRPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQK

A0A6J1II18 uncharacterized protein LOC111477103 isoform X13.4e-6680.7Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTER-WWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQ
        MEALWNLEDKWKLSTQQAFILLTCTA A++G CAA WAK+ K EK E RQ T  TER WWK  A+RRKVSGGGETPVRLLG  GEGE+ GSRNSTAAVWQ
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTER-WWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQ

Query:  RPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKRG
        RPILMGEKCEMLKYSGLILYDERGRLL DQIAAMEN YKVLLRR   NSKDKVEGSTLM FLF     K G
Subjt:  RPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKRG

A0A6J1IND6 uncharacterized protein LOC111477103 isoform X31.3e-5782.76Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTER-WWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQ
        MEALWNLEDKWKLSTQQAFILLTCTA A++G CAA WAK+ K EK E RQ T  TER WWK  A+RRKVSGGGETPVRLLG  GEGE+ GSRNSTAAVWQ
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTER-WWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQ

Query:  RPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRR
        RPILMGEKCEMLKYSGLILYDERGRLL DQIAAMEN YKVLLR++
Subjt:  RPILMGEKCEMLKYSGLILYDERGRLLPDQIAAMENSYKVLLRRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein3.3e-0566.67Show/hide
Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLL
        +WQR ILMG KCE L +SG+I YD  GRLL
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLL

AT1G71740.1 unknown protein4.8e-0451.61Show/hide
Query:  VWQRPILMGEKCEMLKYSGLILYDERGRLLP
        +WQ+ ILMG KC++  +SG+ILYD  G+++P
Subjt:  VWQRPILMGEKCEMLKYSGLILYDERGRLLP

AT3G14760.1 unknown protein7.9e-1538.03Show/hide
Query:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKE-----------HRQRTTVTERWWKWTAERRKVSGG--GETPVRLLGGEGEGE-
        MEALW LE+K KL+T++A ++L  TAAA+  LC AA         K+              RT   +R  KW+  +R + G     +  + +  E   + 
Subjt:  MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKE-----------HRQRTTVTERWWKWTAERRKVSGG--GETPVRLLGGEGEGE-

Query:  -----ELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERG
             +  S N+   VWQRPILMGEKCE+ ++SGLILYDE G
Subjt:  -----ELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERG

AT3G18560.1 unknown protein9.6e-0541.03Show/hide
Query:  TTVTERWWKWTAERRKVSGGG---ETPVRLLGGEGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLL
        TT++ +       + K   GG   +T V ++  E E EE G       VWQR ILMG KCE L YSG+I YD  G  L
Subjt:  TTVTERWWKWTAERRKVSGGG---ETPVRLLGGEGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCTTTCATTCTCTTAACGTGCACGGCGGCCGCCATTGTCGGGCTCTGCGCGGCGGCATG
GGCAAAGAAAATGAAGGGGGAGAAGAAAGAGCACCGACAACGGACGACGGTGACAGAGAGGTGGTGGAAATGGACGGCGGAAAGGCGGAAGGTGAGCGGCGGCGGAGAGA
CGCCGGTGCGGCTGTTGGGCGGGGAAGGGGAAGGTGAAGAATTGGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATG
CTGAAATACAGTGGACTTATTCTGTACGACGAAAGGGGAAGATTGCTGCCGGATCAAATCGCCGCCATGGAAAATAGTTACAAGGTGCTGCTTCGAAGGAGAAGCCATAA
TAGTAAAGACAAGGTTGAAGGATCTACTCTGATGCTGTTCCTCTTCCATGGGAATCTTCAAAAAAGAGGTCCCGAAAACGGCTTGTTGGCTAACGCCAAACTGCACACCA
ATGCTGTGGAAGAACCAATTATCAACCCTCGGAAATCTGTGGTTCCTGCGAACGAGCTTCTCCAGCCATTAACGGAAGAATTCAAGACAAGAAAGAGAGAGAGAGAGACA
TACCAGCAACTCCAGCTGCACCCCTGCAAATTGAGAAGATGGAACCGAAAAGAACCATCTACAATAATTTTCAAGACACAAGAAGACTCTTCGTCTCTTCAACAACAAAG
CTCCGCCACCGCCGTAAACAAACGCACCAAAAATCTCCGCCCCACTGAATCACAGGAACCCTTTAAGCCTCCAAATCAAATAGTGCGAATCGATCTTAAACCCAGAGAGA
AACCCCAAAAACCAAGTGACAATGATGAAGAAGAGGGTTCTTTGGCAGAGACCCAATTCAGAGAGACGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCTTTCATTCTCTTAACGTGCACGGCGGCCGCCATTGTCGGGCTCTGCGCGGCGGCATG
GGCAAAGAAAATGAAGGGGGAGAAGAAAGAGCACCGACAACGGACGACGGTGACAGAGAGGTGGTGGAAATGGACGGCGGAAAGGCGGAAGGTGAGCGGCGGCGGAGAGA
CGCCGGTGCGGCTGTTGGGCGGGGAAGGGGAAGGTGAAGAATTGGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATG
CTGAAATACAGTGGACTTATTCTGTACGACGAAAGGGGAAGATTGCTGCCGGATCAAATCGCCGCCATGGAAAATAGTTACAAGGTGCTGCTTCGAAGGAGAAGCCATAA
TAGTAAAGACAAGGTTGAAGGATCTACTCTGATGCTGTTCCTCTTCCATGGGAATCTTCAAAAAAGAGGTCCCGAAAACGGCTTGTTGGCTAACGCCAAACTGCACACCA
ATGCTGTGGAAGAACCAATTATCAACCCTCGGAAATCTGTGGTTCCTGCGAACGAGCTTCTCCAGCCATTAACGGAAGAATTCAAGACAAGAAAGAGAGAGAGAGAGACA
TACCAGCAACTCCAGCTGCACCCCTGCAAATTGAGAAGATGGAACCGAAAAGAACCATCTACAATAATTTTCAAGACACAAGAAGACTCTTCGTCTCTTCAACAACAAAG
CTCCGCCACCGCCGTAAACAAACGCACCAAAAATCTCCGCCCCACTGAATCACAGGAACCCTTTAAGCCTCCAAATCAAATAGTGCGAATCGATCTTAAACCCAGAGAGA
AACCCCAAAAACCAAGTGACAATGATGAAGAAGAGGGTTCTTTGGCAGAGACCCAATTCAGAGAGACGAATTAA
Protein sequenceShow/hide protein sequence
MEALWNLEDKWKLSTQQAFILLTCTAAAIVGLCAAAWAKKMKGEKKEHRQRTTVTERWWKWTAERRKVSGGGETPVRLLGGEGEGEELGSRNSTAAVWQRPILMGEKCEM
LKYSGLILYDERGRLLPDQIAAMENSYKVLLRRRSHNSKDKVEGSTLMLFLFHGNLQKRGPENGLLANAKLHTNAVEEPIINPRKSVVPANELLQPLTEEFKTRKRERET
YQQLQLHPCKLRRWNRKEPSTIIFKTQEDSSSLQQQSSATAVNKRTKNLRPTESQEPFKPPNQIVRIDLKPREKPQKPSDNDEEEGSLAETQFRETN