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HG10013795 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013795
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCYSTM domain-containing protein
Genome locationChr02:4742819..4743130
RNA-Seq ExpressionHG10013795
SyntenyHG10013795
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032928.1 extensin-like [Cucumis melo var. makuwa]5.2e-2093.22Show/hide
Query:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW
        MSSAQPAGV YPPP STVPTSY+APPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKGW
Subjt:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW

KAF3972548.1 hypothetical protein CMV_003960 [Castanea mollissima]3.6e-1371.43Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSS++PA  YPPPST P  Y APPPAGYPT+DG  +SQ  P P ETKSRGDGFWKG
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

KAG6591814.1 hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2194.64Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSS QPA VYPPPST+PTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

XP_022137938.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]3.0e-2092.86Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSSAQPA VYPPPST P SYAAPPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

XP_031739667.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus]1.0e-1587.93Show/hide
Query:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSSAQPAGV YPPP STVPTSY+APPPAGYPTR+GGDFS   PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

TrEMBL top hitse value%identityAlignment
A0A0A0L4C6 CYSTM domain-containing protein4.9e-1687.93Show/hide
Query:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSSAQPAGV YPPP STVPTSY+APPPAGYPTR+GGDFS   PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

A0A2N9H1G7 Uncharacterized protein4.6e-1473.68Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW
        MSS++PA  YPPPST PT Y APPPAGYPT+DG  +SQ  P P ETKSRGDGFWKGW
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW

A0A5D3DX21 Extensin-like2.5e-2093.22Show/hide
Query:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW
        MSSAQPAGV YPPP STVPTSY+APPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKGW
Subjt:  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW

A0A6J1CBQ4 cysteine-rich and transmembrane domain-containing protein WIH2-like1.5e-2092.86Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSSAQPA VYPPPST P SYAAPPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

A0A7N2LG73 CYSTM domain-containing protein1.7e-1371.43Show/hide
Query:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSS++PA  YPPPST P  Y APPPAGYPT+DG  +SQ  P P ETKSRGDGFWKG
Subjt:  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32190.1 unknown protein1.3e-0549.09Show/hide
Query:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        S  Q +G YP P      Y  PPP GYPT    D S     P ETKS+GDGF KG
Subjt:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

AT2G32190.2 unknown protein7.0e-0750Show/hide
Query:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW
        S  Q +G YP P      Y  PPP GYPT    D S     P ETKS+GDGF KGW
Subjt:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW

AT2G32200.1 unknown protein4.3e-0448.28Show/hide
Query:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRG---DGFWKG
        S  Q AG YP P      Y APPP GYPT    D +     P ETKS+G   DGF KG
Subjt:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRG---DGFWKG

AT2G32210.1 unknown protein5.0e-0549.09Show/hide
Query:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        S  Q +G YP P      Y APPP GYPT    D S       ETKS+GDGF KG
Subjt:  SSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

AT3G22240.1 unknown protein2.3e-0554Show/hide
Query:  VYPPPSTVPTSYAAPPPAGYPTRDG--GDFSQPAPVPAETKSRGDGFWKG
        V  P  T    Y +PPP GYPTRD   GD   P     ETKS+GDGFWKG
Subjt:  VYPPPSTVPTSYAAPPPAGYPTRDG--GDFSQPAPVPAETKSRGDGFWKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCGACATCTTATGCAGCTCCACCGCCGGCGGGGTATCCGACGAGAGACGGCGGAGACTTCTC
TCAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCGACATCTTATGCAGCTCCACCGCCGGCGGGGTATCCGACGAGAGACGGCGGAGACTTCTC
TCAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGGTAA
Protein sequenceShow/hide protein sequence
MSSAQPAGVYPPPSTVPTSYAAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGW