; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013813 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013813
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein NPG1-like
Genome locationChr02:4961064..4965835
RNA-Seq ExpressionHG10013813
SyntenyHG10013813
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR013105 - Tetratricopeptide repeat 2
IPR019734 - Tetratricopeptide repeat
IPR043376 - Protein NPG1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063345.1 tetratricopeptide repeat protein 7B isoform X1 [Cucumis melo var. makuwa]5.9e-4997.09Show/hide
Query:  LMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIES
        LMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIES
Subjt:  LMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIES

Query:  FSS
        FSS
Subjt:  FSS

XP_004149521.1 protein NPG1 [Cucumis sativus]5.9e-4996.15Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        GLMCEGR +IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIE
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSS
        SFSS
Subjt:  SFSS

XP_008464649.1 PREDICTED: tetratricopeptide repeat protein 7B isoform X1 [Cucumis melo]9.1e-5097.12Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        GLMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIE
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSS
        SFSS
Subjt:  SFSS

XP_022936043.1 protein NPG1-like [Cucurbita moschata]1.0e-4894.23Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        GLMCEG E+IQEALAAYINA+LLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADA+DCFQAAAMLEE+DPIE
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSS
        SFSS
Subjt:  SFSS

XP_038898884.1 protein NPG1 [Benincasa hispida]9.1e-5097.12Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        GLMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIE
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSS
        SFSS
Subjt:  SFSS

TrEMBL top hitse value%identityAlignment
A0A0A0L499 O-linked n-acetylglucosamine transferase, ogt2.9e-4996.15Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        GLMCEGR +IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIE
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSS
        SFSS
Subjt:  SFSS

A0A1S4E4T9 tetratricopeptide repeat protein 7B isoform X14.4e-5097.12Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        GLMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIE
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSS
        SFSS
Subjt:  SFSS

A0A5A7VBS0 Tetratricopeptide repeat protein 7B isoform X12.9e-4997.09Show/hide
Query:  LMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIES
        LMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIES
Subjt:  LMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIES

Query:  FSS
        FSS
Subjt:  FSS

A0A5D3DXI7 Tetratricopeptide repeat protein 7B isoform X14.4e-5097.12Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        GLMCEGRE+IQEALAAYINALLLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEE+DPIE
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSS
        SFSS
Subjt:  SFSS

A0A6J1IHN6 protein NPG1-like4.9e-4994.23Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        GLMCEG E+IQEALAAYINA+LLEP YVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADA+DCFQAAAMLEE+DPIE
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSS
        SFSS
Subjt:  SFSS

SwissProt top hitse value%identityAlignment
Q66GN3 Protein NPGR25.4e-1337.74Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAG-PDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEG---RMADAIDCFQAAAMLEET
        G++   R Q++EA+ A+  AL ++P +VP       +  + G    + + RS L +ALR+D  N  AW+ LG + + EG    M +A++CFQAA  LEET
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAG-PDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEG---RMADAIDCFQAAAMLEET

Query:  DPIESF
         P+E F
Subjt:  DPIESF

Q8BGB2 Tetratricopeptide repeat protein 7A3.4e-0732.41Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        G + E +   +EA   Y  AL + P  V     +G + S+ G  +L  A+ +L DA+    T  +AW  LG + +D+G+   A+DCF  A  LE + P+ 
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSSRSRQ
         FS  +R+
Subjt:  SFSSRSRQ

Q8GZN1 Protein NPG15.6e-3464.49Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPD---ALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETD
        G M EGR++ + ALAA+++ LLL+   VPCKV +GAL S+ G D    LP+ARSLLSDALR+DPTNRKAW+YLG++H+ +GR+ADA DCFQAA+MLEE+D
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPD---ALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETD

Query:  PIESFSS
        PIESFS+
Subjt:  PIESFSS

Q9CB03 Protein NPGR12.9e-1439.81Show/hide
Query:  SGLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPI
        +GL  E +   +EAL ++  +L +EP +VP  V I  +  K+G ++LP A+S L +ALRLDP N  AW  LG + + +G    A + +QAA  LE + P+
Subjt:  SGLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPI

Query:  ESF
        +SF
Subjt:  ESF

Q9ULT0 Tetratricopeptide repeat protein 7A2.2e-0631.48Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE
        G + E +  ++EA   Y  AL + P  V     +G + S+ G  +L  A+ +L DA+    T  +AW  LG + + +G+   A+DCF  A  LE + P+ 
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPIE

Query:  SFSSRSRQ
         FS   R+
Subjt:  SFSSRSRQ

Arabidopsis top hitse value%identityAlignment
AT1G27460.1 no pollen germination related 12.0e-1539.81Show/hide
Query:  SGLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPI
        +GL  E +   +EAL ++  +L +EP +VP  V I  +  K+G ++LP A+S L +ALRLDP N  AW  LG + + +G    A + +QAA  LE + P+
Subjt:  SGLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETDPI

Query:  ESF
        +SF
Subjt:  ESF

AT2G43040.1 tetratricopeptide repeat (TPR)-containing protein4.0e-3564.49Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPD---ALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETD
        G M EGR++ + ALAA+++ LLL+   VPCKV +GAL S+ G D    LP+ARSLLSDALR+DPTNRKAW+YLG++H+ +GR+ADA DCFQAA+MLEE+D
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPD---ALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEETD

Query:  PIESFSS
        PIESFS+
Subjt:  PIESFSS

AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.5e-0538.3Show/hide
Query:  IARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLE
        +A    S+A+RLDP N  A  + G++H++EGR+ +A + +Q A M +
Subjt:  IARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLE

AT3G11540.2 Tetratricopeptide repeat (TPR)-like superfamily protein9.5e-0538.3Show/hide
Query:  IARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLE
        +A    S+A+RLDP N  A  + G++H++EGR+ +A + +Q A M +
Subjt:  IARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLE

AT4G28600.1 no pollen germination related 23.9e-1437.74Show/hide
Query:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAG-PDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEG---RMADAIDCFQAAAMLEET
        G++   R Q++EA+ A+  AL ++P +VP       +  + G    + + RS L +ALR+D  N  AW+ LG + + EG    M +A++CFQAA  LEET
Subjt:  GLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAG-PDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEG---RMADAIDCFQAAAMLEET

Query:  DPIESF
         P+E F
Subjt:  DPIESF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATCACATCTGTTGTTCCATCAGGTCTAATGTGTGAAGGACGTGAGCAAATACAAGAAGCTCTAGCTGCTTATATTAATGCTCTCCTACTCGAACCATGC
TATGTTCCTTGCAAGGTTTTGATTGGTGCTCTTTGGTCGAAAGCGGGCCCAGATGCATTGCCTATAGCAAGAAGCTTACTTTCAGACGCATTGAGATTAGATCCC
ACCAACCGTAAGGCTTGGTTTTACTTAGGGGTCATTCATAGGGACGAAGGACGAATGGCCGACGCCATAGACTGTTTCCAGGCAGCCGCTATGCTTGAAGAAACA
GATCCCATTGAAAGCTTCAGCAGTCGATCACGTCAAGCTGGCTATGCAATGGTCACAGGAGATGCATATGTTTCACTTTTTTCGAAGCCGAAAAGAAGGCATCTG
GCGAAATGTGAAGAACTATGCTCACATAGGGCCAAGAATGGTGTTAATCAAGCAGGCCATATGCCAACATCCAACATGGGAAGCAATTATATTATAGTGACAGCC
TCCACGACTTCACAAGTTGTGGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATCACATCTGTTGTTCCATCAGGTCTAATGTGTGAAGGACGTGAGCAAATACAAGAAGCTCTAGCTGCTTATATTAATGCTCTCCTACTCGAACCATGC
TATGTTCCTTGCAAGGTTTTGATTGGTGCTCTTTGGTCGAAAGCGGGCCCAGATGCATTGCCTATAGCAAGAAGCTTACTTTCAGACGCATTGAGATTAGATCCC
ACCAACCGTAAGGCTTGGTTTTACTTAGGGGTCATTCATAGGGACGAAGGACGAATGGCCGACGCCATAGACTGTTTCCAGGCAGCCGCTATGCTTGAAGAAACA
GATCCCATTGAAAGCTTCAGCAGTCGATCACGTCAAGCTGGCTATGCAATGGTCACAGGAGATGCATATGTTTCACTTTTTTCGAAGCCGAAAAGAAGGCATCTG
GCGAAATGTGAAGAACTATGCTCACATAGGGCCAAGAATGGTGTTAATCAAGCAGGCCATATGCCAACATCCAACATGGGAAGCAATTATATTATAGTGACAGCC
TCCACGACTTCACAAGTTGTGGAAGAATGA
Protein sequenceShow/hide protein sequence
MFITSVVPSGLMCEGREQIQEALAAYINALLLEPCYVPCKVLIGALWSKAGPDALPIARSLLSDALRLDPTNRKAWFYLGVIHRDEGRMADAIDCFQAAAMLEET
DPIESFSSRSRQAGYAMVTGDAYVSLFSKPKRRHLAKCEELCSHRAKNGVNQAGHMPTSNMGSNYIIVTASTTSQVVEE