; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10013822 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10013822
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHTH myb-type domain-containing protein
Genome locationChr02:5056082..5061676
RNA-Seq ExpressionHG10013822
SyntenyHG10013822
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607985.1 putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3950Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------
        MKSC SERIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPKRILQMMGVKGLKISHIKSHL                                
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------

Query:  --------------------------------------------QDSDSDSDS----EEECIGGSMLEDQTCDCELTLSLKPS----MTQQILERQLS--
                                                    QDSDS  +S    E ECIGGSMLEDQT  CEL+LSLKP+    +TQQILERQL   
Subjt:  --------------------------------------------QDSDSDSDS----EEECIGGSMLEDQTCDCELTLSLKPS----MTQQILERQLS--

Query:  -----DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI
              Q  N+S         NFV+L EF HP HHINLDLTI
Subjt:  -----DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI

XP_008466796.1 PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis melo]1.2e-5861.04Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------
        MKSC S+RIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPK+ILQMMGVKGLKISHIKSHL                                
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------

Query:  --------------------------------------------QDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSD-QDNN-SSS
                                                    QDSDS+S+SEEEC+G SMLEDQTCDCELTLSLKPSMTQQILERQLSD QDNN SSS
Subjt:  --------------------------------------------QDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSD-QDNN-SSS

Query:  NSISISQLN--FVQLKEFSHPHHHINLDLTI
        NSISISQLN  FV+LK+F HPHHHINLDLTI
Subjt:  NSISISQLN--FVQLKEFSHPHHHINLDLTI

XP_011653983.1 myb family transcription factor PHL12 [Cucumis sativus]8.5e-5457.2Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------
        MK C S+RIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPK+ILQMMGVKGLKISHIKSHL                                
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------

Query:  --------------------------------------------QDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSD-QDN-----
                                                    Q S+S+S+SEEEC+G SMLEDQTCDCELTLSLKPSMTQQI+ERQLSD QDN     
Subjt:  --------------------------------------------QDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSD-QDN-----

Query:  NSSSNSI-SISQLN--FVQLKEFSHPHHHINLDLTI
        NS+SNS+ SISQLN  FV+LK+F HPHHHINLDLTI
Subjt:  NSSSNSI-SISQLN--FVQLKEFSHPHHHINLDLTI

XP_022141381.1 probable transcription factor KAN3 [Momordica charantia]4.1e-4049.79Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ-------------------------------
        MKS  SERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQ+MGVKGLKISHIKSHLQ                               
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ-------------------------------

Query:  DSD---------------------------------SDSDSEEECIGGSM-------LEDQTCDCELTLSLKPSMT---------QQILERQL------S
         SD                                 S  DS+  C+ G M       + +QTCDCEL+LSLKPS +         +QILER+L      +
Subjt:  DSD---------------------------------SDSDSEEECIGGSM-------LEDQTCDCELTLSLKPSMT---------QQILERQL------S

Query:  DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI
        D    ++S S S SQLNFV+LKE S PHHHINLDLTI
Subjt:  DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI

XP_038899444.1 myb family transcription factor MPH1-like [Benincasa hispida]5.0e-6262.45Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ-------------------------------
        MKS  SERIGVRQYNKSELPRLRWTPELHRYFV+TVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ                               
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ-------------------------------

Query:  -----------------------------------------------DSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSDQDNNSSS
                                                       DS+S+S+SEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSDQDNNSSS
Subjt:  -----------------------------------------------DSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSDQDNNSSS

Query:  NSISISQLNFVQLKEFSHPHHHINLDLTI
        NSISISQLNFV LKEFSHPH HINLDLTI
Subjt:  NSISISQLNFVQLKEFSHPHHHINLDLTI

TrEMBL top hitse value%identityAlignment
A0A0A0KZQ0 HTH myb-type domain-containing protein4.1e-5457.2Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------
        MK C S+RIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPK+ILQMMGVKGLKISHIKSHL                                
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------

Query:  --------------------------------------------QDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSD-QDN-----
                                                    Q S+S+S+SEEEC+G SMLEDQTCDCELTLSLKPSMTQQI+ERQLSD QDN     
Subjt:  --------------------------------------------QDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSD-QDN-----

Query:  NSSSNSI-SISQLN--FVQLKEFSHPHHHINLDLTI
        NS+SNS+ SISQLN  FV+LK+F HPHHHINLDLTI
Subjt:  NSSSNSI-SISQLN--FVQLKEFSHPHHHINLDLTI

A0A1S3CS11 putative Myb family transcription factor At1g146005.6e-5961.04Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------
        MKSC S+RIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPK+ILQMMGVKGLKISHIKSHL                                
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------

Query:  --------------------------------------------QDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSD-QDNN-SSS
                                                    QDSDS+S+SEEEC+G SMLEDQTCDCELTLSLKPSMTQQILERQLSD QDNN SSS
Subjt:  --------------------------------------------QDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSD-QDNN-SSS

Query:  NSISISQLN--FVQLKEFSHPHHHINLDLTI
        NSISISQLN  FV+LK+F HPHHHINLDLTI
Subjt:  NSISISQLN--FVQLKEFSHPHHHINLDLTI

A0A6J1CJ05 probable transcription factor KAN32.0e-4049.79Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ-------------------------------
        MKS  SERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQ+MGVKGLKISHIKSHLQ                               
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ-------------------------------

Query:  DSD---------------------------------SDSDSEEECIGGSM-------LEDQTCDCELTLSLKPSMT---------QQILERQL------S
         SD                                 S  DS+  C+ G M       + +QTCDCEL+LSLKPS +         +QILER+L      +
Subjt:  DSD---------------------------------SDSDSEEECIGGSM-------LEDQTCDCELTLSLKPSMT---------QQILERQL------S

Query:  DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI
        D    ++S S S SQLNFV+LKE S PHHHINLDLTI
Subjt:  DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI

A0A6J1FNB8 probable transcription factor KAN44.9e-3949.79Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------
        MKSC SERIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPKRILQMMGVKGLKISHIKSHL                                
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------

Query:  -------------------------------------------QDSDSDSDS----EEECIGGSMLEDQTCDCELTLSLKPS----MTQQILERQLS---
                                                   QDSDS  +S    E ECIGGSMLEDQT  CEL+LSLKP+    +TQQILERQL    
Subjt:  -------------------------------------------QDSDSDSDS----EEECIGGSMLEDQTCDCELTLSLKPS----MTQQILERQLS---

Query:  ----DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI
             Q  N+S         NFV+L EF HP H INLDLTI
Subjt:  ----DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI

A0A6J1J4K7 probable transcription factor KAN33.8e-3949.59Show/hide
Query:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------
        MKSC SERIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPKRILQMMGVKGLKISHIKSHL                                
Subjt:  MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHL--------------------------------

Query:  --------------------------------------------QDSDSDSDS----EEECIGGSMLEDQTCDCELTLSLKPS----MTQQILERQLS--
                                                    QDSDS  +S    E ECIGGSMLEDQT  CEL+LSLKP+    +TQQILERQL   
Subjt:  --------------------------------------------QDSDSDSDS----EEECIGGSMLEDQTCDCELTLSLKPS----MTQQILERQLS--

Query:  -----DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI
              Q  N+S         NFV+  EF HP HHINLDLTI
Subjt:  -----DQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI

SwissProt top hitse value%identityAlignment
A0A0P0X0C0 Myb family transcription factor MPH11.5e-2160Show/hide
Query:  ERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQDSDSDSDSEEECIGGSMLEDQT
        ER GVRQYN+SE+PR+RWT E+HR FV+ VE LGG+++ATPKRILQ+MGVKG+ ISHIKSHLQ   S S +    +    L   T
Subjt:  ERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQDSDSDSDSEEECIGGSMLEDQT

A3AWH5 Myb family transcription factor MOF11.0e-1771.19Show/hide
Query:  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ
        VRQY +S++PRLRWT ELH  FVQ +E LGG+++ATPK ILQ+MGVKGL ISH+KSHLQ
Subjt:  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ

Q700D9 Putative Myb family transcription factor At1g146003.9e-1766.67Show/hide
Query:  GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ
        GVR Y +S +PRLRWTPELHR FV  V++LGG+ +ATPK +L++M VKGL ISH+KSHLQ
Subjt:  GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ

Q9FJV5 Probable transcription factor KAN41.1e-1145.59Show/hide
Query:  KSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ
        K   S  +G+++  ++  PR+RWT  LH +FV  V++LGG  +ATPK +L++M VK L ++H+KSHLQ
Subjt:  KSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ

Q9SAK5 Myb family transcription factor APL1.9e-1164Show/hide
Query:  PRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ
        PRLRWT ELH  FV  V  LGG ++ATPK I+++MGVKGL + H+KSHLQ
Subjt:  PRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ

Arabidopsis top hitse value%identityAlignment
AT1G14600.1 Homeodomain-like superfamily protein2.8e-1866.67Show/hide
Query:  GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ
        GVR Y +S +PRLRWTPELHR FV  V++LGG+ +ATPK +L++M VKGL ISH+KSHLQ
Subjt:  GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ

AT2G02060.1 Homeodomain-like superfamily protein2.5e-1970Show/hide
Query:  GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ
        GVR Y +S +PRLRWTP+LHR FV  VEILGG+++ATPK +L+MM VKGL ISH+KSHLQ
Subjt:  GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ

AT2G38300.1 myb-like HTH transcriptional regulator family protein2.6e-1654.67Show/hide
Query:  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQDSDSDS-DSEEECIGG
        VR Y +S++PRLRWTP+LH  FV+ VE LGG+ +ATPK + QMM +KGL I+H+KSHLQ   S   D + + I G
Subjt:  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQDSDSDS-DSEEECIGG

AT2G40260.1 Homeodomain-like superfamily protein4.7e-1867.8Show/hide
Query:  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ
        VR YN+S+ PRLRWTPELH  F+Q VE LGG ++ATPK +LQ+M VKGL I+H+KSHLQ
Subjt:  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ

AT2G42660.1 Homeodomain-like superfamily protein6.8e-1762.71Show/hide
Query:  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ
        VRQY +S +PRLRWTP+LH  FV+ V+ LGG ++ATPK +L+MM +KGL I+H+KSHLQ
Subjt:  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCTGTTTATCGGAGAGAATCGGAGTTAGACAGTACAATAAATCGGAACTTCCGCGGTTGCGGTGGACGCCGGAGCTTCATCGGTACTTCGTTCAGACA
GTCGAGATCCTTGGCGGAAGAAATCAAGCAACGCCGAAAAGAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATTTCACACATAAAGAGCCATTTACAGGAT
TCAGATTCAGATTCAGATTCAGAGGAAGAATGCATTGGTGGGTCAATGTTAGAAGATCAAACATGTGATTGTGAACTCACATTATCCCTCAAACCTTCAATGACA
CAACAAATTCTAGAGAGACAGTTAAGTGATCAAGATAACAACAGCTCTTCAAATTCTATCTCCATTTCCCAACTTAATTTTGTACAGCTGAAAGAATTCTCCCAT
CCTCACCACCATATCAATTTGGACCTAACCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCTGTTTATCGGAGAGAATCGGAGTTAGACAGTACAATAAATCGGAACTTCCGCGGTTGCGGTGGACGCCGGAGCTTCATCGGTACTTCGTTCAGACA
GTCGAGATCCTTGGCGGAAGAAATCAAGCAACGCCGAAAAGAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATTTCACACATAAAGAGCCATTTACAGGAT
TCAGATTCAGATTCAGATTCAGAGGAAGAATGCATTGGTGGGTCAATGTTAGAAGATCAAACATGTGATTGTGAACTCACATTATCCCTCAAACCTTCAATGACA
CAACAAATTCTAGAGAGACAGTTAAGTGATCAAGATAACAACAGCTCTTCAAATTCTATCTCCATTTCCCAACTTAATTTTGTACAGCTGAAAGAATTCTCCCAT
CCTCACCACCATATCAATTTGGACCTAACCATTTGA
Protein sequenceShow/hide protein sequence
MKSCLSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQDSDSDSDSEEECIGGSMLEDQTCDCELTLSLKPSMT
QQILERQLSDQDNNSSSNSISISQLNFVQLKEFSHPHHHINLDLTI