CuGenDBv2

Gene ID	HG10013861
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein MODIFYING WALL LIGNIN-2-like
Genome location	Chr02:5490038..5490516
RNA-Seq Expression	HG10013861
Synteny	HG10013861
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6608021.1 Protein MODIFYING WALL LIGNIN-1, partial [Cucurbita argyrosperma subsp. sororia]

5.6e-40

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        MEKP SS FVI FSIVA L LASFASC+AAEFNRT KKDLKLNGR CFLPESEAFKLGV GL+CL          IMAQIIGNTIICHSY PKE+RKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISWS
        VKRPLLSTTLLISW+
Subjt:  VKRPLLSTTLLISWS

XP_022937014.1 uncharacterized protein LOC111443438 [Cucurbita moschata]

3.3e-40

82.46

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        MEKP  SSFVISFSIVAVL LASFASC+AAEFNRTKKKDLKLNGR CFLPESEAFKLGV G+VCL          IMA IIGNTIICH+Y PKEHRKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISW
        VKRPLLSTTLLISW
Subjt:  VKRPLLSTTLLISW

XP_022940987.1 uncharacterized protein LOC111446405 [Cucurbita moschata]

5.6e-40

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        MEKP SS FVI FSIVA L LASFASC+AAEFNRT KKDLKLNGR CFLPESEAFKLGV GL+CL          IMAQIIGNTIICHSY PKE+RKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISWS
        VKRPLLSTTLLISW+
Subjt:  VKRPLLSTTLLISWS

XP_023535227.1 uncharacterized protein LOC111796718 [Cucurbita pepo subsp. pepo]

3.3e-40

82.46

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        MEKP  SSFVISFSIVAVL LASFASC+AAEFNRTKKKDLKLNGR CFLPESEAFKLGV G+VCL          IMA IIGNTIICH+Y PKEHRKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISW
        VKRPLLSTTLLISW
Subjt:  VKRPLLSTTLLISW

XP_038896171.1 protein MODIFYING WALL LIGNIN-1 [Benincasa hispida]

3.3e-40

80.7

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        MEKP S  FVISFSIVAVL +ASFASC+AAEFNRTKK+DLKLNGRLCFLPESEAFKLGVGGLVCL          IMAQIIGN IICHSY PKEHRKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISW
        VKRP+LS  LLISW
Subjt:  VKRPLLSTTLLISW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L099 Uncharacterized protein

3.0e-39

76.32

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        ME P SSSFVISFS+VA+L LASFASC+AAEFNRTKK+DLKLN +LCFLPESEAFKLG+GGL+CL          IMAQIIG T+ICHSY PKEHRKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISW
        VK+PLLS  LLISW
Subjt:  VKRPLLSTTLLISW

A0A1S3B9G0 uncharacterized protein LOC103487629

1.8e-39

78.07

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        MEKP SSSFVISFSIVA+L LASFASC+AAEFNRTKK+DLKLNG+ CFLPESEAFKLG+GGLVCLIMAQIIG+T+I           HSY PKEHRKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISW
        VK+PLLS  LLISW
Subjt:  VKRPLLSTTLLISW

A0A6J1F9Y8 uncharacterized protein LOC111443438

1.6e-40

82.46

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        MEKP  SSFVISFSIVAVL LASFASC+AAEFNRTKKKDLKLNGR CFLPESEAFKLGV G+VCL          IMA IIGNTIICH+Y PKEHRKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISW
        VKRPLLSTTLLISW
Subjt:  VKRPLLSTTLLISW

A0A6J1FQT7 uncharacterized protein LOC111446405

2.7e-40

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        MEKP SS FVI FSIVA L LASFASC+AAEFNRT KKDLKLNGR CFLPESEAFKLGV GL+CL          IMAQIIGNTIICHSY PKE+RKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISWS
        VKRPLLSTTLLISW+
Subjt:  VKRPLLSTTLLISWS

A0A6J1II23 uncharacterized protein LOC111477105

3.3e-38

80.7

Show/hide

Query:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS
        ME P  SSFVISFSIVAVL LASFASC+AAEFNRTKKKDLKLNGR CFLPESEAFKLGV G+VCL          IMA IIGNTIICH+Y PKEHRKSCS
Subjt:  MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCS

Query:  VKRPLLSTTLLISW
        VKRPLL TTLLISW
Subjt:  VKRPLLSTTLLISW

SwissProt top hits

e value

%identity

Alignment

A2RVU1 Protein MODIFYING WALL LIGNIN-1

1.6e-08

42.25

Show/hide

Query:  VAVLNLASFASCIAAEFNRTKK----------KDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTII
        + +  LA+F  C++AEF + K           KDLK +G  C+LPE+ AF LG+  LVC+ +AQI+GN +I
Subjt:  VAVLNLASFASCIAAEFNRTKK----------KDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTII

O65708 Protein MODIFYING WALL LIGNIN-2

7.0e-09

35.58

Show/hide

Query:  FSIVAVLNLASFASCIAAEFNRTKKKDLKLN-GRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCSVKRPLLSTTLL
        +S+V  L L SF +C AAEF RT+K+D++ +  R C++P S AF LG   ++C  +AQI+GN ++           H    K           L +  LL
Subjt:  FSIVAVLNLASFASCIAAEFNRTKKKDLKLN-GRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCSVKRPLLSTTLL

Query:  ISWS
        +SWS
Subjt:  ISWS

Arabidopsis top hits

e value

%identity

Alignment

AT1G31720.1 Protein of unknown function (DUF1218)

5.0e-10

41.89

Show/hide

Query:  FSIVAVLNLASFASCIAAEFNRTKK----------KDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTII
        F  + +  LA+F  C++AEF + K           KDLK +G  C+LPE+ AF LG+  LVC+ +AQI+GN +I
Subjt:  FSIVAVLNLASFASCIAAEFNRTKK----------KDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTII

AT4G19370.1 Protein of unknown function (DUF1218)

5.0e-10

35.58

Show/hide

Query:  FSIVAVLNLASFASCIAAEFNRTKKKDLKLN-GRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCSVKRPLLSTTLL
        +S+V  L L SF +C AAEF RT+K+D++ +  R C++P S AF LG   ++C  +AQI+GN ++           H    K           L +  LL
Subjt:  FSIVAVLNLASFASCIAAEFNRTKKKDLKLN-GRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCSVKRPLLSTTLL

Query:  ISWS
        +SWS
Subjt:  ISWS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAAAGCCCCTTTCTTCTAGCTTCGTGATAAGCTTTTCCATTGTCGCAGTCCTTAATCTCGCCTCCTTCGCATCCTGTATAGCTGCTGAATTCAACAGAACAAAAAA
AAAGGACTTGAAATTGAACGGCAGATTGTGCTTCCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGGAGGTTTGGTGTGTTTAATAATGGCTCAGATCATCGGAAACA
CCATAATAATGGCTCAGATCATCGGAAACACCATAATCTGCCATAGCTATTGCCCAAAAGAGCATAGAAAAAGTTGCAGTGTCAAAAGACCTCTGCTTTCAACTACCCTT
CTCATCTCTTGGTCGGTAATTCTTTCTTCATACTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEKPLSSSFVISFSIVAVLNLASFASCIAAEFNRTKKKDLKLNGRLCFLPESEAFKLGVGGLVCLIMAQIIGNTIIMAQIIGNTIICHSYCPKEHRKSCSVKRPLLSTTL
LISWSVILSSY

HG10013861 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome